Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
04:37:22 (29112): wrapper (7.7.26015): starting
04:37:22 (29112): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 04:37:22] Arguments: --nthreads 8
[2025-11-27 04:37:22] Threads: 8
[2025-11-27 04:37:22] Checking for CVMFS
[2025-11-27 04:37:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:37:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:37:22] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:37:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:37:22] 2.11.2.0 2856 145988 82416 153358 0 82 19075228 20275201 1 130560 0 53599982 99.954 5821056 33950 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 04:37:22] CVMFS is ok
[2025-11-27 04:37:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:37:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:37:22] Further information can be found at the LHC@home message board.
[2025-11-27 04:37:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:37:22] Checking for apptainer binary...
[2025-11-27 04:37:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:37:22] Running /usr/bin/apptainer --version
[2025-11-27 04:37:22] apptainer version 1.3.2-1.el7
[2025-11-27 04:37:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:37:24] c-115-6.aglt2.org
[2025-11-27 04:37:24] apptainer works
[2025-11-27 04:37:24] Set ATHENA_PROC_NUMBER=8
[2025-11-27 04:37:24] Set ATHENA_CORE_NUMBER=8
[2025-11-27 04:37:24] Starting ATLAS job with PandaID=6898215344
[2025-11-27 04:37:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:54:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:54:54] 2025-11-27 20:53:57,867 | INFO     | extracted standard info from prmon json
[2025-11-27 15:54:54] 2025-11-27 20:53:57,867 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:54:54] 2025-11-27 20:53:57,867 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:54:54] 2025-11-27 20:53:57,878 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:54:54] 2025-11-27 20:53:57,879 | INFO     | sum of square deviations: 91188792186.74669
[2025-11-27 15:54:54] 2025-11-27 20:53:57,887 | INFO     | sum of deviations: 543308447342.22675
[2025-11-27 15:54:54] 2025-11-27 20:53:57,887 | INFO     | mean x: 1764256545.6195488
[2025-11-27 15:54:54] 2025-11-27 20:53:57,887 | INFO     | mean y: 3255678.890225564
[2025-11-27 15:54:54] 2025-11-27 20:53:57,888 | INFO     | intersect: -10508293619.305548
[2025-11-27 15:54:54] 2025-11-27 20:53:57,888 | INFO     | chi2: 6.52576648869849
[2025-11-27 15:54:54] 2025-11-27 20:53:57,889 | INFO     | sum of square deviations: 89147447009.81183
[2025-11-27 15:54:54] 2025-11-27 20:53:57,897 | INFO     | sum of deviations: 793208224184.3824
[2025-11-27 15:54:54] 2025-11-27 20:53:57,898 | INFO     | mean x: 1764256393.1242423
[2025-11-27 15:54:54] 2025-11-27 20:53:57,898 | INFO     | mean y: 3274333.7636363637
[2025-11-27 15:54:54] 2025-11-27 20:53:57,898 | INFO     | intersect: -15694569267.321198
[2025-11-27 15:54:54] 2025-11-27 20:53:57,899 | INFO     | chi2: 3.359322265384102
[2025-11-27 15:54:54] 2025-11-27 20:53:57,899 | INFO     | current chi2=3.359322265384102 (change=48.52218093917591 %)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,899 | INFO     | sum of square deviations: 87136800082.84886
[2025-11-27 15:54:54] 2025-11-27 20:53:57,908 | INFO     | sum of deviations: 927135060478.0365
[2025-11-27 15:54:54] 2025-11-27 20:53:57,908 | INFO     | mean x: 1764256240.6290076
[2025-11-27 15:54:54] 2025-11-27 20:53:57,909 | INFO     | mean y: 3284488.271755725
[2025-11-27 15:54:54] 2025-11-27 20:53:57,909 | INFO     | intersect: -18768391942.342133
[2025-11-27 15:54:54] 2025-11-27 20:53:57,909 | INFO     | chi2: 2.3883519936929516
[2025-11-27 15:54:54] 2025-11-27 20:53:57,909 | INFO     | current chi2=2.3883519936929516 (change=28.903754834611874 %)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,910 | INFO     | sum of square deviations: 85156579132.62154
[2025-11-27 15:54:54] 2025-11-27 20:53:57,918 | INFO     | sum of deviations: 945366384204.4883
[2025-11-27 15:54:54] 2025-11-27 20:53:57,918 | INFO     | mean x: 1764256088.1323078
[2025-11-27 15:54:54] 2025-11-27 20:53:57,919 | INFO     | mean y: 3285882.633846154
[2025-11-27 15:54:54] 2025-11-27 20:53:57,919 | INFO     | intersect: -19582615944.762043
[2025-11-27 15:54:54] 2025-11-27 20:53:57,919 | INFO     | chi2: 2.2892653920702455
[2025-11-27 15:54:54] 2025-11-27 20:53:57,920 | INFO     | current chi2=2.2892653920702455 (change=4.1487436476854915 %)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,920 | INFO     | right removable region: 649
[2025-11-27 15:54:54] 2025-11-27 20:53:57,920 | INFO     | sum of square deviations: 89147195689.81189
[2025-11-27 15:54:54] 2025-11-27 20:53:57,930 | INFO     | sum of deviations: 341876440708.8251
[2025-11-27 15:54:54] 2025-11-27 20:53:57,930 | INFO     | mean x: 1764256698.1242423
[2025-11-27 15:54:54] 2025-11-27 20:53:57,930 | INFO     | mean y: 3270697.6484848484
[2025-11-27 15:54:54] 2025-11-27 20:53:57,930 | INFO     | intersect: -6762593284.771227
[2025-11-27 15:54:54] 2025-11-27 20:53:57,931 | INFO     | chi2: 4.372000617799107
[2025-11-27 15:54:54] 2025-11-27 20:53:57,931 | INFO     | current chi2=4.372000617799107 (change=33.00402909955998 %)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,931 | INFO     | sum of square deviations: 87136337581.10545
[2025-11-27 15:54:54] 2025-11-27 20:53:57,940 | INFO     | sum of deviations: 302480889402.76373
[2025-11-27 15:54:54] 2025-11-27 20:53:57,940 | INFO     | mean x: 1764256850.627481
[2025-11-27 15:54:54] 2025-11-27 20:53:57,940 | INFO     | mean y: 3273683.0687022903
[2025-11-27 15:54:54] 2025-11-27 20:53:57,941 | INFO     | intersect: -6121082654.676164
[2025-11-27 15:54:54] 2025-11-27 20:53:57,941 | INFO     | chi2: 4.33161855958533
[2025-11-27 15:54:54] 2025-11-27 20:53:57,941 | INFO     | current chi2=4.33161855958533 (change=0.9236517041963649 %)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,941 | INFO     | left removable region: 20
[2025-11-27 15:54:54] 2025-11-27 20:53:57,942 | INFO     | sum of square deviations: 77166408146.22905
[2025-11-27 15:54:54] 2025-11-27 20:53:57,950 | INFO     | sum of deviations: 658755986419.1775
[2025-11-27 15:54:54] 2025-11-27 20:53:57,950 | INFO     | mean x: 1764256667.6438792
[2025-11-27 15:54:54] 2025-11-27 20:53:57,950 | INFO     | mean y: 3308095.5007949127
[2025-11-27 15:54:54] 2025-11-27 20:53:57,950 | INFO     | intersect: -15057839226.37503
[2025-11-27 15:54:54] 2025-11-27 20:53:57,951 | INFO     | chi2: 0.06375479211306694
[2025-11-27 15:54:54] 2025-11-27 20:53:57,951 | INFO     | current memory leak: 8.54 B/s (using 629 data points, chi2=0.06)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,951 | INFO     | could have reported an average CPU frequency of 2369 MHz (26 samples)
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | ..............................
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . Timing measurements:
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . get job = 0 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . initial setup = 2 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . payload setup = 8 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . stage-in = 0 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . payload execution = 40538 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . stage-out = 3 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,952 | INFO     | . log creation = 0 s
[2025-11-27 15:54:54] 2025-11-27 20:53:57,953 | INFO     | ..............................
[2025-11-27 15:54:54] 2025-11-27 20:53:58,039 | INFO     | 
[2025-11-27 15:54:54] 2025-11-27 20:53:58,039 | INFO     | job summary report
[2025-11-27 15:54:54] 2025-11-27 20:53:58,040 | INFO     | --------------------------------------------------
[2025-11-27 15:54:54] 2025-11-27 20:53:58,040 | INFO     | PanDA job id: 6898215344
[2025-11-27 15:54:54] 2025-11-27 20:53:58,040 | INFO     | task id: 47556161
[2025-11-27 15:54:54] 2025-11-27 20:53:58,040 | INFO     | errors: (none)
[2025-11-27 15:54:54] 2025-11-27 20:53:58,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:54:54] 2025-11-27 20:53:58,041 | INFO     | pilot state: finished 
[2025-11-27 15:54:54] 2025-11-27 20:53:58,041 | INFO     | transexitcode: 0
[2025-11-27 15:54:54] 2025-11-27 20:53:58,041 | INFO     | exeerrorcode: 0
[2025-11-27 15:54:54] 2025-11-27 20:53:58,041 | INFO     | exeerrordiag: 
[2025-11-27 15:54:54] 2025-11-27 20:53:58,041 | INFO     | exitcode: 0
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | exitmsg: OK
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | cpuconsumptiontime: 313952 s
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | nevents: 1000
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | neventsw: 0
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | pid: 6976
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | pgrp: 6976
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | corecount: 8
[2025-11-27 15:54:54] 2025-11-27 20:53:58,042 | INFO     | event service: False
[2025-11-27 15:54:54] 2025-11-27 20:53:58,043 | INFO     | sizes: {0: 2284093, 1: 2284292, 7: 2284554, 12: 2284582, 40548: 2328370, 40551: 2337548, 40559: 2337738}
[2025-11-27 15:54:54] 2025-11-27 20:53:58,043 | INFO     | --------------------------------------------------
[2025-11-27 15:54:54] 2025-11-27 20:53:58,043 | INFO     | 
[2025-11-27 15:54:54] 2025-11-27 20:53:58,043 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 15:54:54] 2025-11-27 20:53:58,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,073 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,073 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,073 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,073 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,074 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,074 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,074 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,074 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,075 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,075 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,075 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,075 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,076 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,076 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:54:54] 2025-11-27 20:53:58,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:54:54] 2025-11-27 20:53:58,077 | INFO     | job 6898215344 has completed (purged errors)
[2025-11-27 15:54:54] 2025-11-27 20:53:58,078 | INFO     | overall cleanup function is called
[2025-11-27 15:54:54] 2025-11-27 20:53:59,093 | INFO     | --- collectZombieJob: --- 10, [6976]
[2025-11-27 15:54:54] 2025-11-27 20:53:59,094 | INFO     | zombie collector waiting for pid 6976
[2025-11-27 15:54:54] 2025-11-27 20:53:59,099 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:54:54] 2025-11-27 20:53:59,100 | INFO     | collected zombie processes
[2025-11-27 15:54:54] 2025-11-27 20:53:59,100 | INFO     | will attempt to kill all subprocesses of pid=6976
[2025-11-27 15:54:54] 2025-11-27 20:53:59,183 | INFO     | process IDs to be killed: [6976] (in reverse order)
[2025-11-27 15:54:54] 2025-11-27 20:53:59,237 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:54:54] 2025-11-27 20:53:59,238 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:54:54] 2025-11-27 20:53:59,242 | INFO     | did not find any defunct processes belonging to 6976
[2025-11-27 15:54:54] 2025-11-27 20:53:59,244 | INFO     | did not find any defunct processes belonging to 6976
[2025-11-27 15:54:54] 2025-11-27 20:53:59,247 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:54:54] 2025-11-27 20:53:59,247 | INFO     | ready for new job
[2025-11-27 15:54:54] 2025-11-27 20:53:59,247 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:54:54] 2025-11-27 20:53:59,250 | INFO     | ***************************************
[2025-11-27 15:54:54] 2025-11-27 20:53:59,250 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:54:54] 2025-11-27 20:53:59,251 | INFO     | ***************************************
[2025-11-27 15:54:54] 2025-11-27 20:53:59,251 | INFO     | 
[2025-11-27 15:54:54] 2025-11-27 20:53:59,251 | INFO     | architecture information:
[2025-11-27 15:54:54] 2025-11-27 20:53:59,252 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:54:54] 2025-11-27 20:53:59,271 | INFO     | cat /etc/os-release:
[2025-11-27 15:54:54] NAME="CentOS Linux"
[2025-11-27 15:54:54] VERSION="7 (Core)"
[2025-11-27 15:54:54] ID="centos"
[2025-11-27 15:54:54] ID_LIKE="rhel fedora"
[2025-11-27 15:54:54] VERSION_ID="7"
[2025-11-27 15:54:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:54:54] ANSI_COLOR="0;31"
[2025-11-27 15:54:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:54:54] HOME_URL="https://www.centos.org/"
[2025-11-27 15:54:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:54:54] 
[2025-11-27 15:54:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:54:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:54:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:54:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:54:54] 
[2025-11-27 15:54:54] 2025-11-27 20:53:59,271 | INFO     | ***************************************
[2025-11-27 15:54:54] 2025-11-27 20:53:59,774 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 15:54:54] 2025-11-27 20:53:59,795 | INFO     | sufficient remaining disk space (17461936128 B)
[2025-11-27 15:54:54] 2025-11-27 20:53:59,796 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:54:54] 2025-11-27 20:53:59,796 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:54:54] 2025-11-27 20:53:59,796 | INFO     | update_server=False
[2025-11-27 15:54:54] 2025-11-27 20:53:59,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:54:54] 2025-11-27 20:53:59,797 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:54:54] 2025-11-27 20:53:59,797 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:54:54] 2025-11-27 20:53:59,798 | INFO     | aborting loop
[2025-11-27 15:54:54] 2025-11-27 20:54:00,498 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:54:54] 2025-11-27 20:54:00,579 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:54:54] 2025-11-27 20:54:00,654 | INFO     | all data control threads have been joined
[2025-11-27 15:54:54] 2025-11-27 20:54:00,654 | INFO     | all job control threads have been joined
[2025-11-27 15:54:54] 2025-11-27 20:54:00,746 | INFO     | all payload control threads have been joined
[2025-11-27 15:54:54] 2025-11-27 20:54:00,802 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:00,802 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:00,803 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:00,860 | INFO     | [job] validate thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:00,966 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,157 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,256 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,330 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,352 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,659 | INFO     | [data] control thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,660 | INFO     | [job] control thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,747 | INFO     | [payload] control thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:01,964 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:02,321 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:02,504 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:04,585 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:54:54] 2025-11-27 20:54:30,832 | INFO     | PID=317 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-27 15:54:54] 2025-11-27 20:54:30,833 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:54:54] 2025-11-27 20:54:30,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:54:54] 2025-11-27 20:54:30,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:54:54] 2025-11-27 20:54:48,538 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:54:54] 2025-11-27 20:54:48,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140587530590016)>', '<ExcThread(monitor, started 140586426300160)>']
[2025-11-27 15:54:54] 2025-11-27 20:54:48,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:54:54] 2025-11-27 20:54:48,911 | INFO     | [monitor] control thread has ended
[2025-11-27 15:54:54] 2025-11-27 20:54:53,724 | INFO     | all workflow threads have been joined
[2025-11-27 15:54:54] 2025-11-27 20:54:53,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:54:54] 2025-11-27 20:54:53,728 | INFO     | traces error code: 0
[2025-11-27 15:54:54] 2025-11-27 20:54:53,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:54:54] 2025-11-27 20:54:53,842 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:54:54] 2025-11-27 20:54:53,847 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:54:54] 2025-11-27 20:54:53,851 [wrapper] pilotpid: 317
[2025-11-27 15:54:54] 2025-11-27 20:54:53,856 [wrapper] Pilot exit status: 0
[2025-11-27 15:54:54] 2025-11-27 20:54:53,872 [wrapper] pandaids: 6898215344
[2025-11-27 15:54:54] 2025-11-27 20:54:53,929 [wrapper] cleanup supervisor_pilot 24226 318
[2025-11-27 15:54:54] 2025-11-27 20:54:53,934 [wrapper] Test setup, not cleaning
[2025-11-27 15:54:54] 2025-11-27 20:54:53,939 [wrapper] apfmon messages muted
[2025-11-27 15:54:54] 2025-11-27 20:54:53,944 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:54:54] 2025-11-27 20:54:53,949 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:54:54]  *** Error codes and diagnostics ***
[2025-11-27 15:54:54]     "exeErrorCode": 0,
[2025-11-27 15:54:54]     "exeErrorDiag": "",
[2025-11-27 15:54:54]     "pilotErrorCode": 0,
[2025-11-27 15:54:54]     "pilotErrorDiag": "",
[2025-11-27 15:54:54]  *** Listing of results directory ***
[2025-11-27 15:54:54] total 1319460
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 23:39 pilot3.tar.gz
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:47 queuedata.json
[2025-11-27 15:54:54] -rwx------ 1 boincer umatlas     36292 Nov 25 23:50 runpilot2-wrapper.sh
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas       100 Nov 27 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:54:54] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 04:37 run_atlas
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas       105 Nov 27 04:37 job.xml
[2025-11-27 15:54:54] -rw-r--r-- 2 boincer umatlas 409691093 Nov 27 04:37 EVNT.47483658._002509.pool.root.1
[2025-11-27 15:54:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 04:37 start_atlas.sh
[2025-11-27 15:54:54] drwxrwx--x 2 boincer umatlas      4096 Nov 27 04:37 shared
[2025-11-27 15:54:54] -rw-r--r-- 2 boincer umatlas    590104 Nov 27 04:37 input.tar.gz
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas         0 Nov 27 04:37 boinc_lockfile
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 04:37 pandaJob.out
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas        57 Nov 27 04:37 setup.sh.local
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas    991551 Nov 27 04:37 agis_schedconf.cvmfs.json
[2025-11-27 15:54:54] drwx------ 5 boincer umatlas      4096 Nov 27 04:37 pilot3
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas       533 Nov 27 15:40 boinc_task_state.xml
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas      5911 Nov 27 15:45 init_data.xml
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas 922497433 Nov 27 15:53 HITS.47556161._004919.pool.root.1
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas      1061 Nov 27 15:53 memory_monitor_summary.json
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas   1516240 Nov 27 15:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas   1922509 Nov 27 15:53 log.47556161._004919.job.log.tgz.1
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas      8653 Nov 27 15:53 heartbeat.json
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas        95 Nov 27 15:54 pilot_heartbeat.json
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 15:54 boinc_mmap_file
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas        29 Nov 27 15:54 wrapper_checkpoint.txt
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas      4744 Nov 27 15:54 pilotlog.txt
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas   5586137 Nov 27 15:54 log.47556161._004919.job.log.1
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas       353 Nov 27 15:54 output.list
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas       620 Nov 27 15:54 runtime_log
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas   7526400 Nov 27 15:54 result.tar.gz
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 15:54 runtime_log.err
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas       667 Nov 27 15:54 9CtNDm4eMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxzMKDmx4FAhm.diag
[2025-11-27 15:54:54] -rw-r--r-- 1 boincer umatlas     21064 Nov 27 15:54 stderr.txt
[2025-11-27 15:54:54] HITS file was successfully produced:
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas 922497433 Nov 27 15:53 shared/HITS.pool.root.1
[2025-11-27 15:54:54]  *** Contents of shared directory: ***
[2025-11-27 15:54:54] total 1308924
[2025-11-27 15:54:54] -rw-r--r-- 2 boincer umatlas 409691093 Nov 27 04:37 ATLAS.root_0
[2025-11-27 15:54:54] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 04:37 start_atlas.sh
[2025-11-27 15:54:54] -rw-r--r-- 2 boincer umatlas    590104 Nov 27 04:37 input.tar.gz
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas 922497433 Nov 27 15:53 HITS.pool.root.1
[2025-11-27 15:54:54] -rw------- 1 boincer umatlas   7526400 Nov 27 15:54 result.tar.gz
15:54:55 (29112): run_atlas exited; CPU time 312105.565780
15:54:55 (29112): called boinc_finish(0)

</stderr_txt>
]]>

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