Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:28:54 (3707923): wrapper (7.7.26015): starting
03:28:54 (3707923): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 03:28:54] Arguments: --nthreads 8
[2025-11-27 03:28:54] Threads: 8
[2025-11-27 03:28:54] Checking for CVMFS
[2025-11-27 03:28:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:28:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:28:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:28:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:28:54] 2.13.2.0 7528 34111 154052 153356 3 149 32922382 40960000 20886 16776704 0 74867867 99.769 47878406 43595 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 03:28:54] CVMFS is ok
[2025-11-27 03:28:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:28:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:28:54] Further information can be found at the LHC@home message board.
[2025-11-27 03:28:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:28:54] Checking for apptainer binary...
[2025-11-27 03:28:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:28:54] Running /usr/bin/apptainer --version
[2025-11-27 03:28:54] apptainer version 1.4.4-1.el9
[2025-11-27 03:28:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:28:55] c-212-9.aglt2.org
[2025-11-27 03:28:55] apptainer works
[2025-11-27 03:28:55] Set ATHENA_PROC_NUMBER=8
[2025-11-27 03:28:55] Set ATHENA_CORE_NUMBER=8
[2025-11-27 03:28:55] Starting ATLAS job with PandaID=6898214318
[2025-11-27 03:28:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:02:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:02:28] 2025-11-27 19:01:53,347 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,580 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 14:02:28] 2025-11-27 19:01:53,584 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3041.391677083333
[2025-11-27 14:02:28] 2025-11-27 19:01:53,596 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898214318/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,597 | INFO     | extracted standard info from prmon json
[2025-11-27 14:02:28] 2025-11-27 19:01:53,597 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 14:02:28] 2025-11-27 19:01:53,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:02:28] 2025-11-27 19:01:53,606 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:02:28] 2025-11-27 19:01:53,609 | INFO     | sum of square deviations: 74614685497.16399
[2025-11-27 14:02:28] 2025-11-27 19:01:53,618 | INFO     | sum of deviations: 755647803735.7786
[2025-11-27 14:02:28] 2025-11-27 19:01:53,619 | INFO     | mean x: 1764251119.0675242
[2025-11-27 14:02:28] 2025-11-27 19:01:53,619 | INFO     | mean y: 2901998.7909967843
[2025-11-27 14:02:28] 2025-11-27 19:01:53,619 | INFO     | intersect: -17864257454.85886
[2025-11-27 14:02:28] 2025-11-27 19:01:53,619 | INFO     | chi2: 5.365898161192608
[2025-11-27 14:02:28] 2025-11-27 19:01:53,620 | INFO     | sum of square deviations: 72829727133.04057
[2025-11-27 14:02:28] 2025-11-27 19:01:53,628 | INFO     | sum of deviations: 948590977897.0981
[2025-11-27 14:02:28] 2025-11-27 19:01:53,628 | INFO     | mean x: 1764250966.5721233
[2025-11-27 14:02:28] 2025-11-27 19:01:53,629 | INFO     | mean y: 2918468.773095624
[2025-11-27 14:02:28] 2025-11-27 19:01:53,629 | INFO     | intersect: -22976057500.468353
[2025-11-27 14:02:28] 2025-11-27 19:01:53,629 | INFO     | chi2: 2.6082176004587256
[2025-11-27 14:02:28] 2025-11-27 19:01:53,629 | INFO     | current chi2=2.6082176004587256 (change=51.392711488228635 %)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,630 | INFO     | sum of square deviations: 71073466981.39038
[2025-11-27 14:02:28] 2025-11-27 19:01:53,638 | INFO     | sum of deviations: 937724353224.0099
[2025-11-27 14:02:28] 2025-11-27 19:01:53,638 | INFO     | mean x: 1764250814.0767975
[2025-11-27 14:02:28] 2025-11-27 19:01:53,638 | INFO     | mean y: 2917521.1274509802
[2025-11-27 14:02:28] 2025-11-27 19:01:53,638 | INFO     | intersect: -23274136825.86641
[2025-11-27 14:02:28] 2025-11-27 19:01:53,639 | INFO     | chi2: 2.5907025287812946
[2025-11-27 14:02:28] 2025-11-27 19:01:53,639 | INFO     | current chi2=2.5907025287812946 (change=0.6715341417200218 %)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,639 | INFO     | right removable region: 611
[2025-11-27 14:02:28] 2025-11-27 19:01:53,640 | INFO     | sum of square deviations: 72829511803.04053
[2025-11-27 14:02:28] 2025-11-27 19:01:53,649 | INFO     | sum of deviations: 564769982126.9971
[2025-11-27 14:02:28] 2025-11-27 19:01:53,649 | INFO     | mean x: 1764251271.5721233
[2025-11-27 14:02:28] 2025-11-27 19:01:53,649 | INFO     | mean y: 2918284.6742301458
[2025-11-27 14:02:28] 2025-11-27 19:01:53,649 | INFO     | intersect: -13678296025.919594
[2025-11-27 14:02:28] 2025-11-27 19:01:53,650 | INFO     | chi2: 2.882998038177038
[2025-11-27 14:02:28] 2025-11-27 19:01:53,650 | INFO     | current chi2=2.882998038177038 (change=46.271845801555955 %)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,651 | INFO     | sum of square deviations: 71073149232.83672
[2025-11-27 14:02:28] 2025-11-27 19:01:53,656 | INFO     | sum of deviations: 531469727397.3856
[2025-11-27 14:02:28] 2025-11-27 19:01:53,657 | INFO     | mean x: 1764251424.0718954
[2025-11-27 14:02:28] 2025-11-27 19:01:53,657 | INFO     | mean y: 2921172.9003267973
[2025-11-27 14:02:28] 2025-11-27 19:01:53,657 | INFO     | intersect: -13189771616.611452
[2025-11-27 14:02:28] 2025-11-27 19:01:53,657 | INFO     | chi2: 2.8560723866546134
[2025-11-27 14:02:28] 2025-11-27 19:01:53,657 | INFO     | current chi2=2.8560723866546134 (change=0.9339462311757329 %)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,657 | INFO     | left removable region: 20
[2025-11-27 14:02:28] 2025-11-27 19:01:53,658 | INFO     | sum of square deviations: 64004671929.262436
[2025-11-27 14:02:28] 2025-11-27 19:01:53,662 | INFO     | sum of deviations: 665661996705.5266
[2025-11-27 14:02:28] 2025-11-27 19:01:53,663 | INFO     | mean x: 1764251393.5871403
[2025-11-27 14:02:28] 2025-11-27 19:01:53,663 | INFO     | mean y: 2941181.358714044
[2025-11-27 14:02:28] 2025-11-27 19:01:53,663 | INFO     | intersect: -18345642913.30953
[2025-11-27 14:02:28] 2025-11-27 19:01:53,663 | INFO     | chi2: 0.03834828993695878
[2025-11-27 14:02:28] 2025-11-27 19:01:53,663 | INFO     | current memory leak: 10.40 B/s (using 591 data points, chi2=0.04)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | could have reported an average CPU frequency of 2982 MHz (24 samples)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | ..............................
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | . Timing measurements:
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | . get job = 0 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | . initial setup = 2 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | . payload setup = 7 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | . stage-in = 0 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,664 | INFO     | . payload execution = 37927 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,665 | INFO     | . stage-out = 3 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,665 | INFO     | . log creation = 0 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,665 | INFO     | ..............................
[2025-11-27 14:02:28] 2025-11-27 19:01:53,737 | INFO     | 
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | job summary report
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | --------------------------------------------------
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | PanDA job id: 6898214318
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | task id: 47556161
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | errors: (none)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | pilot state: finished 
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | transexitcode: 0
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | exeerrorcode: 0
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | exeerrordiag: 
[2025-11-27 14:02:28] 2025-11-27 19:01:53,739 | INFO     | exitcode: 0
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | exitmsg: OK
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | cpuconsumptiontime: 207305 s
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | nevents: 1000
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | neventsw: 0
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | pid: 3718110
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | pgrp: 3718110
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | corecount: 8
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | event service: False
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | sizes: {0: 2284037, 1: 2284292, 6: 2284554, 12: 2284582, 37938: 2327346, 37939: 2327345, 37942: 2336579, 37950: 2336769}
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | --------------------------------------------------
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | 
[2025-11-27 14:02:28] 2025-11-27 19:01:53,740 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 14:02:28] 2025-11-27 19:01:53,836 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | job 6898214318 has completed (purged errors)
[2025-11-27 14:02:28] 2025-11-27 19:01:53,838 | INFO     | overall cleanup function is called
[2025-11-27 14:02:28] 2025-11-27 19:01:54,946 | INFO     | --- collectZombieJob: --- 10, [3718110]
[2025-11-27 14:02:28] 2025-11-27 19:01:54,973 | INFO     | zombie collector waiting for pid 3718110
[2025-11-27 14:02:28] 2025-11-27 19:01:54,974 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:02:28] 2025-11-27 19:01:54,974 | INFO     | collected zombie processes
[2025-11-27 14:02:28] 2025-11-27 19:01:54,974 | INFO     | will attempt to kill all subprocesses of pid=3718110
[2025-11-27 14:02:28] 2025-11-27 19:01:55,638 | INFO     | process IDs to be killed: [3718110] (in reverse order)
[2025-11-27 14:02:28] 2025-11-27 19:01:55,863 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:02:28] 2025-11-27 19:01:55,863 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:02:28] 2025-11-27 19:01:55,896 | INFO     | did not find any defunct processes belonging to 3718110
[2025-11-27 14:02:28] 2025-11-27 19:01:55,982 | INFO     | did not find any defunct processes belonging to 3718110
[2025-11-27 14:02:28] 2025-11-27 19:01:56,007 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:02:28] 2025-11-27 19:01:56,008 | INFO     | ready for new job
[2025-11-27 14:02:28] 2025-11-27 19:01:56,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:02:28] 2025-11-27 19:01:56,015 | INFO     | ***************************************
[2025-11-27 14:02:28] 2025-11-27 19:01:56,016 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:02:28] 2025-11-27 19:01:56,016 | INFO     | ***************************************
[2025-11-27 14:02:28] 2025-11-27 19:01:56,016 | INFO     | 
[2025-11-27 14:02:28] 2025-11-27 19:01:56,058 | INFO     | architecture information:
[2025-11-27 14:02:28] 2025-11-27 19:01:56,072 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:02:28] 2025-11-27 19:01:56,092 | INFO     | cat /etc/os-release:
[2025-11-27 14:02:28] NAME="CentOS Linux"
[2025-11-27 14:02:28] VERSION="7 (Core)"
[2025-11-27 14:02:28] ID="centos"
[2025-11-27 14:02:28] ID_LIKE="rhel fedora"
[2025-11-27 14:02:28] VERSION_ID="7"
[2025-11-27 14:02:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:02:28] ANSI_COLOR="0;31"
[2025-11-27 14:02:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:02:28] HOME_URL="https://www.centos.org/"
[2025-11-27 14:02:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:02:28] 
[2025-11-27 14:02:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:02:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:02:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:02:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:02:28] 
[2025-11-27 14:02:28] 2025-11-27 19:01:56,092 | INFO     | ***************************************
[2025-11-27 14:02:28] 2025-11-27 19:01:56,607 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 14:02:28] 2025-11-27 19:01:56,654 | INFO     | sufficient remaining disk space (120954290176 B)
[2025-11-27 14:02:28] 2025-11-27 19:01:56,654 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:02:28] 2025-11-27 19:01:56,655 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:02:28] 2025-11-27 19:01:56,655 | INFO     | update_server=False
[2025-11-27 14:02:28] 2025-11-27 19:01:56,655 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:02:28] 2025-11-27 19:01:56,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:02:28] 2025-11-27 19:01:56,833 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:02:28] 2025-11-27 19:01:56,979 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:02:28] 2025-11-27 19:01:56,980 | INFO     | aborting loop
[2025-11-27 14:02:28] 2025-11-27 19:01:57,211 | INFO     | all data control threads have been joined
[2025-11-27 14:02:28] 2025-11-27 19:01:57,292 | INFO     | all job control threads have been joined
[2025-11-27 14:02:28] 2025-11-27 19:01:57,388 | INFO     | all payload control threads have been joined
[2025-11-27 14:02:28] 2025-11-27 19:01:57,661 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:57,984 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:57,994 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,207 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,216 | INFO     | [data] control thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,293 | INFO     | [job] control thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,393 | INFO     | [payload] control thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,399 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,424 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,476 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,653 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,664 | INFO     | [job] validate thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:58,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:02:28] 2025-11-27 19:01:58,826 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:01:59,760 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:02:00,838 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:02:07,646 | INFO     | job.realtimelogging is not enabled
[2025-11-27 14:02:28] 2025-11-27 19:02:08,652 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:02:28] 2025-11-27 19:02:13,933 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:02:28] 2025-11-27 19:02:14,251 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140615227385664)>', '<ExcThread(monitor, started 140614586844928)>']
[2025-11-27 14:02:28] 2025-11-27 19:02:19,323 | INFO     | all workflow threads have been joined
[2025-11-27 14:02:28] 2025-11-27 19:02:19,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:02:28] 2025-11-27 19:02:19,325 | INFO     | traces error code: 0
[2025-11-27 14:02:28] 2025-11-27 19:02:19,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:02:28] 2025-11-27 19:02:27,739 | INFO     | PID=3711623 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:02:28] 2025-11-27 19:02:27,762 | INFO     | .. there are 19 such processes running
[2025-11-27 14:02:28] 2025-11-27 19:02:27,763 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:02:28] 2025-11-27 19:02:27,763 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:02:28] 2025-11-27 19:02:27,763 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:02:28] 2025-11-27 19:02:27,763 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:02:28] 2025-11-27 19:02:27,763 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 14:02:28] 2025-11-27 19:02:27,763 | INFO     | [monitor] control thread has ended
[2025-11-27 14:02:28] 2025-11-27 19:02:28,256 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:02:28] 2025-11-27 19:02:28,260 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:02:28] 2025-11-27 19:02:28,262 [wrapper] pilotpid: 3711623
[2025-11-27 14:02:28] 2025-11-27 19:02:28,265 [wrapper] Pilot exit status: 0
[2025-11-27 14:02:28] 2025-11-27 19:02:28,276 [wrapper] pandaids: 6898214318
[2025-11-27 14:02:28] 2025-11-27 19:02:28,365 [wrapper] cleanup supervisor_pilot 1906178 3711624
[2025-11-27 14:02:28] 2025-11-27 19:02:28,368 [wrapper] Test setup, not cleaning
[2025-11-27 14:02:28] 2025-11-27 19:02:28,370 [wrapper] apfmon messages muted
[2025-11-27 14:02:28] 2025-11-27 19:02:28,372 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:02:28] 2025-11-27 19:02:28,384 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:02:28]  *** Error codes and diagnostics ***
[2025-11-27 14:02:28]     "exeErrorCode": 0,
[2025-11-27 14:02:28]     "exeErrorDiag": "",
[2025-11-27 14:02:28]     "pilotErrorCode": 0,
[2025-11-27 14:02:28]     "pilotErrorDiag": "",
[2025-11-27 14:02:28]  *** Listing of results directory ***
[2025-11-27 14:02:28] total 1308392
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:31 queuedata.json
[2025-11-27 14:02:28] -rwx------. 1 boincer umatlas     36292 Nov 25 23:31 runpilot2-wrapper.sh
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas       100 Nov 27 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:02:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 03:28 run_atlas
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas       105 Nov 27 03:28 job.xml
[2025-11-27 14:02:28] -rw-r--r--. 2 boincer umatlas 409489955 Nov 27 03:28 EVNT.47483658._002494.pool.root.1
[2025-11-27 14:02:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 03:28 start_atlas.sh
[2025-11-27 14:02:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 03:28 shared
[2025-11-27 14:02:28] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 03:28 input.tar.gz
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas         0 Nov 27 03:28 boinc_lockfile
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 03:28 pandaJob.out
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas        57 Nov 27 03:28 setup.sh.local
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas    991573 Nov 27 03:29 agis_schedconf.cvmfs.json
[2025-11-27 14:02:28] drwx------. 5 boincer umatlas      4096 Nov 27 03:29 pilot3
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:55 boinc_task_state.xml
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas      6950 Nov 27 13:58 init_data.xml
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas 912864668 Nov 27 14:00 HITS.47556161._004769.pool.root.1
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas      1068 Nov 27 14:01 memory_monitor_summary.json
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas        95 Nov 27 14:01 pilot_heartbeat.json
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas   1858599 Nov 27 14:01 log.47556161._004769.job.log.tgz.1
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas      8617 Nov 27 14:01 heartbeat.json
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:02 wrapper_checkpoint.txt
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:02 boinc_mmap_file
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas       893 Nov 27 14:02 pilotlog.txt
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas   4898901 Nov 27 14:02 log.47556161._004769.job.log.1
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas       353 Nov 27 14:02 output.list
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:02 runtime_log
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas   6778880 Nov 27 14:02 result.tar.gz
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 14:02 runtime_log.err
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas       663 Nov 27 14:02 2kzLDm0MMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWxMKDme9Decm.diag
[2025-11-27 14:02:28] -rw-r--r--. 1 boincer umatlas     21290 Nov 27 14:02 stderr.txt
[2025-11-27 14:02:28] HITS file was successfully produced:
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas 912864668 Nov 27 14:00 shared/HITS.pool.root.1
[2025-11-27 14:02:28]  *** Contents of shared directory: ***
[2025-11-27 14:02:28] total 1298592
[2025-11-27 14:02:28] -rw-r--r--. 2 boincer umatlas 409489955 Nov 27 03:28 ATLAS.root_0
[2025-11-27 14:02:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 03:28 start_atlas.sh
[2025-11-27 14:02:28] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 03:28 input.tar.gz
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas 912864668 Nov 27 14:00 HITS.pool.root.1
[2025-11-27 14:02:28] -rw-------. 1 boincer umatlas   6778880 Nov 27 14:02 result.tar.gz
14:02:30 (3707923): run_atlas exited; CPU time 207379.002623
14:02:30 (3707923): called boinc_finish(0)

</stderr_txt>
]]>

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