Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:42:14 (2411933): wrapper (7.7.26015): starting
06:42:14 (2411933): wrapper: running run_atlas (--nthreads 3)
[2025-11-30 06:42:14] Arguments: --nthreads 3
[2025-11-30 06:42:14] Threads: 3
[2025-11-30 06:42:14] Checking for CVMFS
[2025-11-30 06:42:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 06:42:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 06:42:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 06:42:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 06:42:14] 2.9.2.0 237354 16417 99760 153470 3 81 22010599 36864001 0 130560 1 6051250 99.949 763837 949 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-30 06:42:14] CVMFS is ok
[2025-11-30 06:42:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 06:42:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 06:42:14] Further information can be found at the LHC@home message board.
[2025-11-30 06:42:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 06:42:14] Checking for apptainer binary...
[2025-11-30 06:42:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 06:42:14] Running /usr/bin/apptainer --version
[2025-11-30 06:42:14] apptainer version 1.4.1-1.1
[2025-11-30 06:42:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 06:42:14] cosA127b
[2025-11-30 06:42:14] apptainer works
[2025-11-30 06:42:14] Set ATHENA_PROC_NUMBER=3
[2025-11-30 06:42:14] Set ATHENA_CORE_NUMBER=3
[2025-11-30 06:42:14] Starting ATLAS job with PandaID=6898214409
[2025-11-30 06:42:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 14:46:06]  *** The last 200 lines of the pilot log: ***
[2025-11-30 14:46:06] 2025-11-30 13:45:33,736 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6898214409/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 14:46:06] 2025-11-30 13:45:33,786 | INFO     | number of running child processes to parent process 2422090: 1
[2025-11-30 14:46:06] 2025-11-30 13:45:33,786 | INFO     | maximum number of monitored processes: 8
[2025-11-30 14:46:06] 2025-11-30 13:45:35,048 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 14:46:06] 2025-11-30 13:45:35,049 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3755.8578333333335
[2025-11-30 14:46:06] 2025-11-30 13:45:35,050 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6898214409/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,050 | INFO     | extracted standard info from prmon json
[2025-11-30 14:46:06] 2025-11-30 13:45:35,050 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 14:46:06] 2025-11-30 13:45:35,050 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 14:46:06] 2025-11-30 13:45:35,053 | INFO     | fitting pss+swap vs Time
[2025-11-30 14:46:06] 2025-11-30 13:45:35,053 | INFO     | sum of square deviations: 33232064950.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,055 | INFO     | sum of deviations: 199099191064.99994
[2025-11-30 14:46:06] 2025-11-30 13:45:35,055 | INFO     | mean x: 1764495816.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,055 | INFO     | mean y: 2206318.52
[2025-11-30 14:46:06] 2025-11-30 13:45:35,055 | INFO     | intersect: -10569200848.977636
[2025-11-30 14:46:06] 2025-11-30 13:45:35,055 | INFO     | chi2: 3.2472635111071204
[2025-11-30 14:46:06] 2025-11-30 13:45:35,055 | INFO     | sum of square deviations: 32193636177.5
[2025-11-30 14:46:06] 2025-11-30 13:45:35,057 | INFO     | sum of deviations: 244251087468.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,057 | INFO     | mean x: 1764495663.5
[2025-11-30 14:46:06] 2025-11-30 13:45:35,057 | INFO     | mean y: 2212911.029787234
[2025-11-30 14:46:06] 2025-11-30 13:45:35,057 | INFO     | intersect: -13384904414.463732
[2025-11-30 14:46:06] 2025-11-30 13:45:35,058 | INFO     | chi2: 2.3407296864191953
[2025-11-30 14:46:06] 2025-11-30 13:45:35,058 | INFO     | current chi2=2.3407296864191953 (change=27.91685434788912 %)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,058 | INFO     | sum of square deviations: 31177068280.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,059 | INFO     | sum of deviations: 240938855422.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,059 | INFO     | mean x: 1764495511.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,059 | INFO     | mean y: 2212414.0494623655
[2025-11-30 14:46:06] 2025-11-30 13:45:35,060 | INFO     | intersect: -13633948786.210672
[2025-11-30 14:46:06] 2025-11-30 13:45:35,060 | INFO     | chi2: 2.339252528736215
[2025-11-30 14:46:06] 2025-11-30 13:45:35,060 | INFO     | current chi2=2.339252528736215 (change=0.06310671802689569 %)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,060 | INFO     | right removable region: 464
[2025-11-30 14:46:06] 2025-11-30 13:45:35,060 | INFO     | sum of square deviations: 32193636177.5
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | sum of deviations: 98750325220.50005
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | mean x: 1764495968.5
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | mean y: 2221035.168085106
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | intersect: -5410170090.175345
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | chi2: 1.1242769240172057
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | current chi2=1.1242769240172057 (change=65.37771202824572 %)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,062 | INFO     | sum of square deviations: 31177068280.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | sum of deviations: 76320378689.00002
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | mean x: 1764496121.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | mean y: 2224384.664516129
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | intersect: -4317200743.463393
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | chi2: 0.9565970378888893
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | current chi2=0.9565970378888893 (change=14.914464803668807 %)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | left removable region: 20
[2025-11-30 14:46:06] 2025-11-30 13:45:35,064 | INFO     | sum of square deviations: 27140955395.0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,066 | INFO     | sum of deviations: 106450624474.5
[2025-11-30 14:46:06] 2025-11-30 13:45:35,066 | INFO     | mean x: 1764496090.5
[2025-11-30 14:46:06] 2025-11-30 13:45:35,066 | INFO     | mean y: 2233050.5157657657
[2025-11-30 14:46:06] 2025-11-30 13:45:35,066 | INFO     | intersect: -6918367495.15043
[2025-11-30 14:46:06] 2025-11-30 13:45:35,066 | INFO     | chi2: 0.03866347811672788
[2025-11-30 14:46:06] 2025-11-30 13:45:35,066 | INFO     | current memory leak: 3.92 B/s (using 444 data points, chi2=0.04)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | could have reported an average CPU frequency of 3955 MHz (19 samples)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | ..............................
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . Timing measurements:
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . get job = 0 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . initial setup = 1 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . payload setup = 2 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . stage-in = 0 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . payload execution = 28969 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . stage-out = 0 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | . log creation = 0 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,067 | INFO     | ..............................
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | 
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | job summary report
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | --------------------------------------------------
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | PanDA job id: 6898214409
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | task id: 47556173
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | errors: (none)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | pilot state: finished 
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | transexitcode: 0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | exeerrorcode: 0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | exeerrordiag: 
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | exitcode: 0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | exitmsg: OK
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | cpuconsumptiontime: 85596 s
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | nevents: 1000
[2025-11-30 14:46:06] 2025-11-30 13:45:35,408 | INFO     | neventsw: 0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | pid: 2422090
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | pgrp: 2422090
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | corecount: 3
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | event service: False
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | sizes: {0: 2284267, 2: 2284529, 10: 2284557, 28975: 2323524, 28977: 2332524, 28978: 2332580, 28981: 2332954}
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | --------------------------------------------------
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | 
[2025-11-30 14:46:06] 2025-11-30 13:45:35,409 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-30 14:46:06] 2025-11-30 13:45:35,424 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,424 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,424 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | job 6898214409 has completed (purged errors)
[2025-11-30 14:46:06] 2025-11-30 13:45:35,425 | INFO     | overall cleanup function is called
[2025-11-30 14:46:06] 2025-11-30 13:45:36,434 | INFO     | --- collectZombieJob: --- 10, [2422090]
[2025-11-30 14:46:06] 2025-11-30 13:45:36,434 | INFO     | zombie collector waiting for pid 2422090
[2025-11-30 14:46:06] 2025-11-30 13:45:36,434 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 14:46:06] 2025-11-30 13:45:36,434 | INFO     | collected zombie processes
[2025-11-30 14:46:06] 2025-11-30 13:45:36,434 | INFO     | will attempt to kill all subprocesses of pid=2422090
[2025-11-30 14:46:06] 2025-11-30 13:45:36,475 | INFO     | process IDs to be killed: [2422090] (in reverse order)
[2025-11-30 14:46:06] 2025-11-30 13:45:36,499 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 14:46:06] 2025-11-30 13:45:36,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 14:46:06] 2025-11-30 13:45:36,500 | INFO     | did not find any defunct processes belonging to 2422090
[2025-11-30 14:46:06] 2025-11-30 13:45:36,501 | INFO     | did not find any defunct processes belonging to 2422090
[2025-11-30 14:46:06] 2025-11-30 13:45:36,502 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 14:46:06] 2025-11-30 13:45:36,502 | INFO     | ready for new job
[2025-11-30 14:46:06] 2025-11-30 13:45:36,502 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 14:46:06] 2025-11-30 13:45:36,503 | INFO     | ***************************************
[2025-11-30 14:46:06] 2025-11-30 13:45:36,503 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 14:46:06] 2025-11-30 13:45:36,503 | INFO     | ***************************************
[2025-11-30 14:46:06] 2025-11-30 13:45:36,503 | INFO     | 
[2025-11-30 14:46:06] 2025-11-30 13:45:36,504 | INFO     | architecture information:
[2025-11-30 14:46:06] 2025-11-30 13:45:36,504 | INFO     | executing command: cat /etc/os-release
[2025-11-30 14:46:06] 2025-11-30 13:45:36,512 | INFO     | cat /etc/os-release:
[2025-11-30 14:46:06] NAME="CentOS Linux"
[2025-11-30 14:46:06] VERSION="7 (Core)"
[2025-11-30 14:46:06] ID="centos"
[2025-11-30 14:46:06] ID_LIKE="rhel fedora"
[2025-11-30 14:46:06] VERSION_ID="7"
[2025-11-30 14:46:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 14:46:06] ANSI_COLOR="0;31"
[2025-11-30 14:46:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 14:46:06] HOME_URL="https://www.centos.org/"
[2025-11-30 14:46:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 14:46:06] 
[2025-11-30 14:46:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 14:46:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 14:46:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 14:46:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 14:46:06] 
[2025-11-30 14:46:06] 2025-11-30 13:45:36,513 | INFO     | ***************************************
[2025-11-30 14:46:06] 2025-11-30 13:45:37,016 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-30 14:46:06] 2025-11-30 13:45:37,028 | INFO     | sufficient remaining disk space (334963408896 B)
[2025-11-30 14:46:06] 2025-11-30 13:45:37,029 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 14:46:06] 2025-11-30 13:45:37,029 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 14:46:06] 2025-11-30 13:45:37,029 | INFO     | update_server=False
[2025-11-30 14:46:06] 2025-11-30 13:45:37,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 14:46:06] 2025-11-30 13:45:37,029 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 14:46:06] 2025-11-30 13:45:37,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 14:46:06] 2025-11-30 13:45:37,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 14:46:06] 2025-11-30 13:45:37,296 | INFO     | aborting loop
[2025-11-30 14:46:06] 2025-11-30 13:45:37,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 14:46:06] 2025-11-30 13:45:38,030 | INFO     | [job] queue monitor thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,031 | INFO     | [job] retrieve thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,042 | INFO     | [job] validate thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,056 | INFO     | all job control threads have been joined
[2025-11-30 14:46:06] 2025-11-30 13:45:38,071 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,135 | INFO     | all data control threads have been joined
[2025-11-30 14:46:06] 2025-11-30 13:45:38,208 | INFO     | all payload control threads have been joined
[2025-11-30 14:46:06] 2025-11-30 13:45:38,292 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,301 | INFO     | [job] job monitor thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,658 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,908 | INFO     | [data] copytool_in thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:38,990 | INFO     | [payload] failed_post thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:39,035 | INFO     | [data] copytool_out thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:39,061 | INFO     | [job] control thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:39,141 | INFO     | [data] control thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:39,214 | INFO     | [payload] control thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:39,520 | INFO     | [payload] validate_post thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:41,792 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:47,742 | INFO     | job.realtimelogging is not enabled
[2025-11-30 14:46:06] 2025-11-30 13:45:48,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 14:46:06] 2025-11-30 13:45:52,913 | INFO     | [monitor] cgroup control has ended
[2025-11-30 14:46:06] 2025-11-30 13:45:54,305 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140123696256832)>', '<ExcThread(monitor, started 140123341567744)>']
[2025-11-30 14:46:06] 2025-11-30 13:45:59,331 | INFO     | all workflow threads have been joined
[2025-11-30 14:46:06] 2025-11-30 13:45:59,332 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 14:46:06] 2025-11-30 13:45:59,332 | INFO     | traces error code: 0
[2025-11-30 14:46:06] 2025-11-30 13:45:59,332 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 14:46:06] 2025-11-30 13:46:06,713 | INFO     | PID=2415649 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 14:46:06] 2025-11-30 13:46:06,714 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 14:46:06] 2025-11-30 13:46:06,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 14:46:06] 2025-11-30 13:46:06,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 14:46:06] 2025-11-30 13:46:06,714 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 14:46:06] 2025-11-30 13:46:06,714 | INFO     | [monitor] control thread has ended
[2025-11-30 14:46:06] 2025-11-30 13:46:06,761 [wrapper] ==== pilot stdout END ====
[2025-11-30 14:46:06] 2025-11-30 13:46:06,764 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 14:46:06] 2025-11-30 13:46:06,766 [wrapper] pilotpid: 2415649
[2025-11-30 14:46:06] 2025-11-30 13:46:06,768 [wrapper] Pilot exit status: 0
[2025-11-30 14:46:06] 2025-11-30 13:46:06,776 [wrapper] pandaids: 6898214409
[2025-11-30 14:46:06] 2025-11-30 13:46:06,791 [wrapper] cleanup supervisor_pilot 2473143 2415650
[2025-11-30 14:46:06] 2025-11-30 13:46:06,794 [wrapper] Test setup, not cleaning
[2025-11-30 14:46:06] 2025-11-30 13:46:06,796 [wrapper] apfmon messages muted
[2025-11-30 14:46:06] 2025-11-30 13:46:06,798 [wrapper] ==== wrapper stdout END ====
[2025-11-30 14:46:06] 2025-11-30 13:46:06,801 [wrapper] ==== wrapper stderr END ====
[2025-11-30 14:46:06]  *** Error codes and diagnostics ***
[2025-11-30 14:46:06]     "exeErrorCode": 0,
[2025-11-30 14:46:06]     "exeErrorDiag": "",
[2025-11-30 14:46:06]     "pilotErrorCode": 0,
[2025-11-30 14:46:06]     "pilotErrorDiag": "",
[2025-11-30 14:46:06]  *** Listing of results directory ***
[2025-11-30 14:46:06] total 1307820
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc    576529 Nov 26 05:39 pilot3.tar.gz
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc      5112 Nov 26 05:42 queuedata.json
[2025-11-30 14:46:06] -rwx------ 1 boinc boinc     36292 Nov 26 05:42 runpilot2-wrapper.sh
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc       100 Nov 30 06:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 14:46:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 06:42 run_atlas
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc       105 Nov 30 06:42 job.xml
[2025-11-30 14:46:06] -rw-r--r-- 2 boinc boinc 407528081 Nov 30 06:42 EVNT.47483658._003181.pool.root.1
[2025-11-30 14:46:06] -rw-r--r-- 2 boinc boinc    590102 Nov 30 06:42 input.tar.gz
[2025-11-30 14:46:06] -rw-r--r-- 2 boinc boinc     15847 Nov 30 06:42 start_atlas.sh
[2025-11-30 14:46:06] drwxrwx--x 2 boinc boinc      4096 Nov 30 06:42 shared
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc         0 Nov 30 06:42 boinc_setup_complete
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc      6442 Nov 30 06:42 init_data.xml
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc         0 Nov 30 06:42 boinc_lockfile
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc      2785 Nov 30 06:42 pandaJob.out
[2025-11-30 14:46:06] -rw------- 1 boinc boinc    991116 Nov 30 06:42 agis_schedconf.cvmfs.json
[2025-11-30 14:46:06] drwx------ 5 boinc boinc      4096 Nov 30 06:42 pilot3
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc       531 Nov 30 14:42 boinc_task_state.xml
[2025-11-30 14:46:06] -rw------- 1 boinc boinc 917279494 Nov 30 14:45 HITS.47556173._001373.pool.root.1
[2025-11-30 14:46:06] -rw------- 1 boinc boinc      1025 Nov 30 14:45 memory_monitor_summary.json
[2025-11-30 14:46:06] -rw------- 1 boinc boinc   1516240 Nov 30 14:45 agis_ddmendpoints.agis.ALL.json
[2025-11-30 14:46:06] -rw------- 1 boinc boinc   1160506 Nov 30 14:45 log.47556173._001373.job.log.tgz.1
[2025-11-30 14:46:06] -rw------- 1 boinc boinc      8569 Nov 30 14:45 heartbeat.json
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc        28 Nov 30 14:45 wrapper_checkpoint.txt
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc      8192 Nov 30 14:45 boinc_mmap_file
[2025-11-30 14:46:06] -rw------- 1 boinc boinc       747 Nov 30 14:46 pilotlog.txt
[2025-11-30 14:46:06] -rw------- 1 boinc boinc        95 Nov 30 14:46 pilot_heartbeat.json
[2025-11-30 14:46:06] -rw------- 1 boinc boinc   4080558 Nov 30 14:46 log.47556173._001373.job.log.1
[2025-11-30 14:46:06] -rw------- 1 boinc boinc       353 Nov 30 14:46 output.list
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc       620 Nov 30 14:46 runtime_log
[2025-11-30 14:46:06] -rw------- 1 boinc boinc   5263360 Nov 30 14:46 result.tar.gz
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc      8908 Nov 30 14:46 runtime_log.err
[2025-11-30 14:46:06] -rw------- 1 boinc boinc       667 Nov 30 14:46 3KxLDmuXMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmpyMKDmX6Blpm.diag
[2025-11-30 14:46:06] -rw-r--r-- 1 boinc boinc     21234 Nov 30 14:46 stderr.txt
[2025-11-30 14:46:06] HITS file was successfully produced:
[2025-11-30 14:46:06] -rw------- 1 boinc boinc 917279494 Nov 30 14:45 shared/HITS.pool.root.1
[2025-11-30 14:46:06]  *** Contents of shared directory: ***
[2025-11-30 14:46:06] total 1299508
[2025-11-30 14:46:06] -rw-r--r-- 2 boinc boinc 407528081 Nov 30 06:42 ATLAS.root_0
[2025-11-30 14:46:06] -rw-r--r-- 2 boinc boinc    590102 Nov 30 06:42 input.tar.gz
[2025-11-30 14:46:06] -rw-r--r-- 2 boinc boinc     15847 Nov 30 06:42 start_atlas.sh
[2025-11-30 14:46:06] -rw------- 1 boinc boinc 917279494 Nov 30 14:45 HITS.pool.root.1
[2025-11-30 14:46:06] -rw------- 1 boinc boinc   5263360 Nov 30 14:46 result.tar.gz
14:46:08 (2411933): run_atlas exited; CPU time 85622.642722
14:46:08 (2411933): called boinc_finish(0)

</stderr_txt>
]]>

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