Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:54:35 (19687): wrapper (7.7.26015): starting
01:54:35 (19687): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:54:35] Arguments: --nthreads 8
[2025-11-27 01:54:35] Threads: 8
[2025-11-27 01:54:35] Checking for CVMFS
[2025-11-27 01:54:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:54:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:54:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:54:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:54:36] 2.11.2.0 2954 74051 85660 153350 2 81 10716895 20275200 1 130560 0 22261361 99.945 3094524 29978 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:54:36] CVMFS is ok
[2025-11-27 01:54:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:54:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:54:36] Further information can be found at the LHC@home message board.
[2025-11-27 01:54:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:54:36] Checking for apptainer binary...
[2025-11-27 01:54:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:54:36] Running /usr/bin/apptainer --version
[2025-11-27 01:54:36] apptainer version 1.3.2-1.el7
[2025-11-27 01:54:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:54:37] c-115-12.aglt2.org
[2025-11-27 01:54:37] apptainer works
[2025-11-27 01:54:37] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:54:37] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:54:37] Starting ATLAS job with PandaID=6898214261
[2025-11-27 01:54:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:29:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:29:09] 2025-11-27 18:28:12,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:29:09] 2025-11-27 18:28:14,547 | INFO     | time since job start (41599s) is within the limit (172800.0s)
[2025-11-27 13:29:09] 2025-11-27 18:28:15,301 | INFO     | monitor loop #3036: job 0:6898214261 is in state 'finished'
[2025-11-27 13:29:09] 2025-11-27 18:28:15,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,313 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 13:29:09] 2025-11-27 18:28:16,319 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1762.375
[2025-11-27 13:29:09] 2025-11-27 18:28:16,321 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898214261/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,322 | INFO     | extracted standard info from prmon json
[2025-11-27 13:29:09] 2025-11-27 18:28:16,322 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:29:09] 2025-11-27 18:28:16,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:29:09] 2025-11-27 18:28:16,333 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:29:09] 2025-11-27 18:28:16,333 | INFO     | sum of square deviations: 98362563991.44414
[2025-11-27 13:29:09] 2025-11-27 18:28:16,342 | INFO     | sum of deviations: 820905225942.2723
[2025-11-27 13:29:09] 2025-11-27 18:28:16,342 | INFO     | mean x: 1764247297.1510265
[2025-11-27 13:29:09] 2025-11-27 18:28:16,342 | INFO     | mean y: 2913095.1818181816
[2025-11-27 13:29:09] 2025-11-27 18:28:16,342 | INFO     | intersect: -14720979484.639326
[2025-11-27 13:29:09] 2025-11-27 18:28:16,343 | INFO     | chi2: 5.317452046385467
[2025-11-27 13:29:09] 2025-11-27 18:28:16,344 | INFO     | sum of square deviations: 96215114956.80937
[2025-11-27 13:29:09] 2025-11-27 18:28:16,352 | INFO     | sum of deviations: 1029449450603.4976
[2025-11-27 13:29:09] 2025-11-27 18:28:16,353 | INFO     | mean x: 1764247144.6558347
[2025-11-27 13:29:09] 2025-11-27 18:28:16,353 | INFO     | mean y: 2927890.658788774
[2025-11-27 13:29:09] 2025-11-27 18:28:16,353 | INFO     | intersect: -18873557936.02266
[2025-11-27 13:29:09] 2025-11-27 18:28:16,353 | INFO     | chi2: 2.605984945135704
[2025-11-27 13:29:09] 2025-11-27 18:28:16,354 | INFO     | current chi2=2.605984945135704 (change=50.991848682356824 %)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,354 | INFO     | sum of square deviations: 94099113831.96286
[2025-11-27 13:29:09] 2025-11-27 18:28:16,363 | INFO     | sum of deviations: 1052982984182.4663
[2025-11-27 13:29:09] 2025-11-27 18:28:16,363 | INFO     | mean x: 1764246992.1592262
[2025-11-27 13:29:09] 2025-11-27 18:28:16,363 | INFO     | mean y: 2929578.59375
[2025-11-27 13:29:09] 2025-11-27 18:28:16,363 | INFO     | intersect: -19739254879.765575
[2025-11-27 13:29:09] 2025-11-27 18:28:16,364 | INFO     | chi2: 2.473088284016117
[2025-11-27 13:29:09] 2025-11-27 18:28:16,364 | INFO     | current chi2=2.473088284016117 (change=5.099671100082518 %)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,364 | INFO     | right removable region: 671
[2025-11-27 13:29:09] 2025-11-27 18:28:16,365 | INFO     | sum of square deviations: 96214844116.80946
[2025-11-27 13:29:09] 2025-11-27 18:28:16,373 | INFO     | sum of deviations: 635357850730.2493
[2025-11-27 13:29:09] 2025-11-27 18:28:16,373 | INFO     | mean x: 1764247449.6558347
[2025-11-27 13:29:09] 2025-11-27 18:28:16,374 | INFO     | mean y: 2926244.443131462
[2025-11-27 13:29:09] 2025-11-27 18:28:16,374 | INFO     | intersect: -11647339138.815126
[2025-11-27 13:29:09] 2025-11-27 18:28:16,374 | INFO     | chi2: 3.096093784682542
[2025-11-27 13:29:09] 2025-11-27 18:28:16,375 | INFO     | current chi2=3.096093784682542 (change=41.7748621393378 %)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,375 | INFO     | sum of square deviations: 94098695799.27953
[2025-11-27 13:29:09] 2025-11-27 18:28:16,384 | INFO     | sum of deviations: 593597385965.8064
[2025-11-27 13:29:09] 2025-11-27 18:28:16,384 | INFO     | mean x: 1764247602.1577382
[2025-11-27 13:29:09] 2025-11-27 18:28:16,384 | INFO     | mean y: 2929252.162202381
[2025-11-27 13:29:09] 2025-11-27 18:28:16,385 | INFO     | intersect: -11126372338.490595
[2025-11-27 13:29:09] 2025-11-27 18:28:16,385 | INFO     | chi2: 3.0544328323173406
[2025-11-27 13:29:09] 2025-11-27 18:28:16,385 | INFO     | current chi2=3.0544328323173406 (change=1.3455972351778382 %)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,385 | INFO     | left removable region: 20
[2025-11-27 13:29:09] 2025-11-27 18:28:16,386 | INFO     | sum of square deviations: 85549894833.99257
[2025-11-27 13:29:09] 2025-11-27 18:28:16,394 | INFO     | sum of deviations: 745371629955.82
[2025-11-27 13:29:09] 2025-11-27 18:28:16,394 | INFO     | mean x: 1764247571.6697388
[2025-11-27 13:29:09] 2025-11-27 18:28:16,394 | INFO     | mean y: 2951976.757296467
[2025-11-27 13:29:09] 2025-11-27 18:28:16,394 | INFO     | intersect: -15368429726.199022
[2025-11-27 13:29:09] 2025-11-27 18:28:16,395 | INFO     | chi2: 0.13224802860465118
[2025-11-27 13:29:09] 2025-11-27 18:28:16,396 | INFO     | current memory leak: 8.71 B/s (using 651 data points, chi2=0.13)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,396 | INFO     | could have reported an average CPU frequency of 2415 MHz (26 samples)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,396 | INFO     | ..............................
[2025-11-27 13:29:09] 2025-11-27 18:28:16,396 | INFO     | . Timing measurements:
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . get job = 0 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . initial setup = 2 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . payload setup = 8 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . stage-in = 0 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . payload execution = 41562 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . stage-out = 3 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | . log creation = 0 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,397 | INFO     | ..............................
[2025-11-27 13:29:09] 2025-11-27 18:28:16,477 | INFO     | 
[2025-11-27 13:29:09] 2025-11-27 18:28:16,478 | INFO     | job summary report
[2025-11-27 13:29:09] 2025-11-27 18:28:16,478 | INFO     | --------------------------------------------------
[2025-11-27 13:29:09] 2025-11-27 18:28:16,478 | INFO     | PanDA job id: 6898214261
[2025-11-27 13:29:09] 2025-11-27 18:28:16,478 | INFO     | task id: 47556161
[2025-11-27 13:29:09] 2025-11-27 18:28:16,478 | INFO     | errors: (none)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | pilot state: finished 
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | transexitcode: 0
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | exeerrorcode: 0
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | exeerrordiag: 
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | exitcode: 0
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | exitmsg: OK
[2025-11-27 13:29:09] 2025-11-27 18:28:16,479 | INFO     | cpuconsumptiontime: 324639 s
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | nevents: 1000
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | neventsw: 0
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | pid: 29975
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | pgrp: 29975
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | corecount: 8
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | event service: False
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | sizes: {0: 2284264, 6: 2284526, 11: 2284554, 41574: 2328680, 41577: 2337730, 41584: 2337920}
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | --------------------------------------------------
[2025-11-27 13:29:09] 2025-11-27 18:28:16,480 | INFO     | 
[2025-11-27 13:29:09] 2025-11-27 18:28:16,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 13:29:09] 2025-11-27 18:28:16,510 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,510 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,511 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,511 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,511 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,511 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,511 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,511 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,512 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,512 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,512 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,512 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,512 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,512 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:29:09] 2025-11-27 18:28:16,514 | INFO     | job 6898214261 has completed (purged errors)
[2025-11-27 13:29:09] 2025-11-27 18:28:16,514 | INFO     | overall cleanup function is called
[2025-11-27 13:29:09] 2025-11-27 18:28:17,529 | INFO     | --- collectZombieJob: --- 10, [29975]
[2025-11-27 13:29:09] 2025-11-27 18:28:17,529 | INFO     | zombie collector waiting for pid 29975
[2025-11-27 13:29:09] 2025-11-27 18:28:17,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:29:09] 2025-11-27 18:28:17,530 | INFO     | collected zombie processes
[2025-11-27 13:29:09] 2025-11-27 18:28:17,530 | INFO     | will attempt to kill all subprocesses of pid=29975
[2025-11-27 13:29:09] 2025-11-27 18:28:17,617 | INFO     | process IDs to be killed: [29975] (in reverse order)
[2025-11-27 13:29:09] 2025-11-27 18:28:17,674 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:29:09] 2025-11-27 18:28:17,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:29:09] 2025-11-27 18:28:17,679 | INFO     | did not find any defunct processes belonging to 29975
[2025-11-27 13:29:09] 2025-11-27 18:28:17,681 | INFO     | did not find any defunct processes belonging to 29975
[2025-11-27 13:29:09] 2025-11-27 18:28:17,684 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:29:09] 2025-11-27 18:28:17,684 | INFO     | ready for new job
[2025-11-27 13:29:09] 2025-11-27 18:28:17,684 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:29:09] 2025-11-27 18:28:17,687 | INFO     | ***************************************
[2025-11-27 13:29:09] 2025-11-27 18:28:17,687 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:29:09] 2025-11-27 18:28:17,687 | INFO     | ***************************************
[2025-11-27 13:29:09] 2025-11-27 18:28:17,687 | INFO     | 
[2025-11-27 13:29:09] 2025-11-27 18:28:17,688 | INFO     | architecture information:
[2025-11-27 13:29:09] 2025-11-27 18:28:17,689 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:29:09] 2025-11-27 18:28:17,709 | INFO     | cat /etc/os-release:
[2025-11-27 13:29:09] NAME="CentOS Linux"
[2025-11-27 13:29:09] VERSION="7 (Core)"
[2025-11-27 13:29:09] ID="centos"
[2025-11-27 13:29:09] ID_LIKE="rhel fedora"
[2025-11-27 13:29:09] VERSION_ID="7"
[2025-11-27 13:29:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:29:09] ANSI_COLOR="0;31"
[2025-11-27 13:29:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:29:09] HOME_URL="https://www.centos.org/"
[2025-11-27 13:29:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:29:09] 
[2025-11-27 13:29:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:29:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:29:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:29:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:29:09] 
[2025-11-27 13:29:09] 2025-11-27 18:28:17,709 | INFO     | ***************************************
[2025-11-27 13:29:09] 2025-11-27 18:28:18,212 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 13:29:09] 2025-11-27 18:28:18,235 | INFO     | sufficient remaining disk space (17589862400 B)
[2025-11-27 13:29:09] 2025-11-27 18:28:18,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:29:09] 2025-11-27 18:28:18,235 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:29:09] 2025-11-27 18:28:18,236 | INFO     | update_server=False
[2025-11-27 13:29:09] 2025-11-27 18:28:18,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:29:09] 2025-11-27 18:28:18,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:29:09] 2025-11-27 18:28:18,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:29:09] 2025-11-27 18:28:18,292 | INFO     | all data control threads have been joined
[2025-11-27 13:29:09] 2025-11-27 18:28:18,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:29:09] 2025-11-27 18:28:18,810 | INFO     | aborting loop
[2025-11-27 13:29:09] 2025-11-27 18:28:18,921 | INFO     | all payload control threads have been joined
[2025-11-27 13:29:09] 2025-11-27 18:28:19,241 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,242 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,249 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,293 | INFO     | [data] control thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,300 | INFO     | all job control threads have been joined
[2025-11-27 13:29:09] 2025-11-27 18:28:19,346 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,567 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,663 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,700 | INFO     | [job] validate thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,816 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:19,926 | INFO     | [payload] control thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:20,241 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:20,306 | INFO     | [job] control thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:20,394 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:20,413 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:20,463 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:20,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:29:09] 2025-11-27 18:28:24,667 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:29:09] 2025-11-27 18:28:47,754 | INFO     | PID=23367 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 13:29:09] 2025-11-27 18:28:47,755 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:29:09] 2025-11-27 18:28:47,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:29:09] 2025-11-27 18:28:47,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:29:09] 2025-11-27 18:29:04,104 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:29:09] 2025-11-27 18:29:04,375 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140004826670912)>', '<ExcThread(monitor, started 140004114294528)>']
[2025-11-27 13:29:09] 2025-11-27 18:29:04,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:29:09] 2025-11-27 18:29:04,832 | INFO     | [monitor] control thread has ended
[2025-11-27 13:29:09] 2025-11-27 18:29:09,400 | INFO     | all workflow threads have been joined
[2025-11-27 13:29:09] 2025-11-27 18:29:09,400 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:29:09] 2025-11-27 18:29:09,401 | INFO     | traces error code: 0
[2025-11-27 13:29:09] 2025-11-27 18:29:09,401 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:29:09] 2025-11-27 18:29:09,516 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:29:09] 2025-11-27 18:29:09,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:29:09] 2025-11-27 18:29:09,525 [wrapper] pilotpid: 23367
[2025-11-27 13:29:09] 2025-11-27 18:29:09,530 [wrapper] Pilot exit status: 0
[2025-11-27 13:29:09] 2025-11-27 18:29:09,544 [wrapper] pandaids: 6898214261
[2025-11-27 13:29:09] 2025-11-27 18:29:09,587 [wrapper] cleanup supervisor_pilot 31438 23368
[2025-11-27 13:29:09] 2025-11-27 18:29:09,592 [wrapper] Test setup, not cleaning
[2025-11-27 13:29:09] 2025-11-27 18:29:09,597 [wrapper] apfmon messages muted
[2025-11-27 13:29:09] 2025-11-27 18:29:09,602 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:29:09] 2025-11-27 18:29:09,608 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:29:09]  *** Error codes and diagnostics ***
[2025-11-27 13:29:09]     "exeErrorCode": 0,
[2025-11-27 13:29:09]     "exeErrorDiag": "",
[2025-11-27 13:29:09]     "pilotErrorCode": 0,
[2025-11-27 13:29:09]     "pilotErrorDiag": "",
[2025-11-27 13:29:09]  *** Listing of results directory ***
[2025-11-27 13:29:09] total 1331024
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:31 queuedata.json
[2025-11-27 13:29:09] -rwx------ 1 boincer umatlas     36292 Nov 25 23:31 runpilot2-wrapper.sh
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas       100 Nov 27 01:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:29:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 01:54 run_atlas
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas       105 Nov 27 01:54 job.xml
[2025-11-27 13:29:09] -rw-r--r-- 2 boincer umatlas 411285683 Nov 27 01:54 EVNT.47483658._002491.pool.root.1
[2025-11-27 13:29:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:54 start_atlas.sh
[2025-11-27 13:29:09] drwxrwx--x 2 boincer umatlas      4096 Nov 27 01:54 shared
[2025-11-27 13:29:09] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 01:54 input.tar.gz
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas         0 Nov 27 01:54 boinc_lockfile
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 01:54 pandaJob.out
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas        57 Nov 27 01:54 setup.sh.local
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas    991554 Nov 27 01:54 agis_schedconf.cvmfs.json
[2025-11-27 13:29:09] drwx------ 5 boincer umatlas      4096 Nov 27 01:54 pilot3
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas       533 Nov 27 13:19 boinc_task_state.xml
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas 932421883 Nov 27 13:27 HITS.47556161._004732.pool.root.1
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas      1064 Nov 27 13:28 memory_monitor_summary.json
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas   1516240 Nov 27 13:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas   1946742 Nov 27 13:28 log.47556161._004732.job.log.tgz.1
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas      8672 Nov 27 13:28 heartbeat.json
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 13:28 init_data.xml
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas        95 Nov 27 13:28 pilot_heartbeat.json
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 13:28 boinc_mmap_file
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas        29 Nov 27 13:28 wrapper_checkpoint.txt
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas      4746 Nov 27 13:29 pilotlog.txt
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas   5719164 Nov 27 13:29 log.47556161._004732.job.log.1
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas       353 Nov 27 13:29 output.list
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas       620 Nov 27 13:29 runtime_log
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas   7690240 Nov 27 13:29 result.tar.gz
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 13:29 runtime_log.err
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas       668 Nov 27 13:29 NDaKDm0MMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCxMKDmYZdIQn.diag
[2025-11-27 13:29:09] -rw-r--r-- 1 boincer umatlas     21295 Nov 27 13:29 stderr.txt
[2025-11-27 13:29:09] HITS file was successfully produced:
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas 932421883 Nov 27 13:27 shared/HITS.pool.root.1
[2025-11-27 13:29:09]  *** Contents of shared directory: ***
[2025-11-27 13:29:09] total 1320332
[2025-11-27 13:29:09] -rw-r--r-- 2 boincer umatlas 411285683 Nov 27 01:54 ATLAS.root_0
[2025-11-27 13:29:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:54 start_atlas.sh
[2025-11-27 13:29:09] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 01:54 input.tar.gz
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas 932421883 Nov 27 13:27 HITS.pool.root.1
[2025-11-27 13:29:09] -rw------- 1 boincer umatlas   7690240 Nov 27 13:29 result.tar.gz
13:29:11 (19687): run_atlas exited; CPU time 322172.108197
13:29:11 (19687): called boinc_finish(0)

</stderr_txt>
]]>

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