Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 07:28:23 (31344): vboxwrapper version 26210
2025-11-27 07:28:23 (31344): BOINC client version: 8.0.2
2025-11-27 07:28:24 (31344): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-27 07:28:24 (31344): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 07:28:24 (31344): Create VM. (boinc_d0cc2e228df84f66, slot#1)
2025-11-27 07:28:25 (31344): Setting Memory Size for VM. (6200MB)
2025-11-27 07:28:25 (31344): Setting CPU Count for VM. (4)
2025-11-27 07:28:25 (31344): Setting Chipset Options for VM.
2025-11-27 07:28:26 (31344): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 07:28:26 (31344): Setting Boot Options for VM.
2025-11-27 07:28:27 (31344): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 07:28:27 (31344): Enabling VM Network Access.
2025-11-27 07:28:27 (31344): Disabling USB Support for VM.
2025-11-27 07:28:27 (31344): Disabling COM Port Support for VM.
2025-11-27 07:28:28 (31344): Disabling LPT Port Support for VM.
2025-11-27 07:28:28 (31344): Disabling Audio Support for VM.
2025-11-27 07:28:28 (31344): Disabling Clipboard Support for VM.
2025-11-27 07:28:28 (31344): Disabling Drag and Drop Support for VM.
2025-11-27 07:28:29 (31344): Adding storage controller(s) to VM.
2025-11-27 07:28:29 (31344): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 07:28:29 (31344): Adding VirtualBox Guest Additions to VM.
2025-11-27 07:28:30 (31344): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 07:28:30 (31344): forwarding host port 55922 to guest port 80
2025-11-27 07:28:30 (31344): Enabling remote desktop for VM.
2025-11-27 07:28:31 (31344): Enabling shared directory for VM.
2025-11-27 07:28:31 (31344): Starting VM using VBoxManage interface. (boinc_d0cc2e228df84f66, slot#1)
2025-11-27 07:28:37 (31344): Successfully started VM. (PID = '32600')
2025-11-27 07:28:37 (31344): Reporting VM Process ID to BOINC.
2025-11-27 07:28:37 (31344): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-27 07:28:37 (31344): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 07:28:37 (31344): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 07:28:37 (31344): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 07:28:37 (31344): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 07:28:37 (31344): Detected: Web Application Enabled (http://localhost:55922)
2025-11-27 07:28:37 (31344): Detected: Remote Desktop Enabled (localhost:55923)
2025-11-27 07:28:37 (31344): Preference change detected
2025-11-27 07:28:37 (31344): Setting CPU throttle for VM. (100%)
2025-11-27 07:28:37 (31344): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 07:28:39 (31344): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 07:28:39 (31344): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 07:28:41 (31344): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 07:28:41 (31344): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 07:28:41 (31344): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 07:28:47 (31344): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 07:28:47 (31344): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 07:28:50 (31344): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000083 main     Log opened 2025-11-27T07:28:48.875705000Z
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000146 main     OS Product: Linux
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000174 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000193 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000211 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000211 main     Process ID: 1360
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.000212 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 07:28:50 (31344): Guest Log: 00:00:00.001109 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 07:28:51 (31344): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 07:28:51 (31344): Guest Log: [INFO] Mounting shared directory
2025-11-27 07:28:51 (31344): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 07:29:01 (31344): Guest Log: 00:00:10.091719 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 759 655 000ns (GuestNow=1 764 224 940 117 823 000 ns GuestLast=1 764 228 528 877 478 000 ns fSetTimeLastLoop=true )
2025-11-27 07:29:42 (31344): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 07:29:42 (31344): Guest Log: [INFO] Detected branch: prod
2025-11-27 07:29:43 (31344): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 07:29:43 (31344): Guest Log: Copying input files
2025-11-27 07:29:44 (31344): Guest Log: Copied input files into RunAtlas.
2025-11-27 07:29:45 (31344): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-11-27 07:29:53 (31344): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 07:29:53 (31344): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 07:29:53 (31344): Guest Log: 2.6.3.0 1658 0 31628 153350 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-11-27 07:29:53 (31344): Guest Log: copied the webapp to /var/www
2025-11-27 07:29:53 (31344): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-27 07:29:53 (31344): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-27 07:29:53 (31344): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 07:29:53 (31344): Guest Log:  *** Starting ATLAS job. (PandaID=6897507569 taskID=47556161) ***
2025-11-27 09:08:41 (31344): Status Report: Elapsed Time: '6000.000000'
2025-11-27 09:08:41 (31344): Status Report: CPU Time: '22551.359375'
2025-11-27 10:48:45 (31344): Status Report: Elapsed Time: '12000.000000'
2025-11-27 10:48:45 (31344): Status Report: CPU Time: '46482.359375'
2025-11-27 12:28:50 (31344): Status Report: Elapsed Time: '18000.000000'
2025-11-27 12:28:50 (31344): Status Report: CPU Time: '70420.046875'
2025-11-27 14:08:54 (31344): Status Report: Elapsed Time: '24000.000000'
2025-11-27 14:08:54 (31344): Status Report: CPU Time: '94357.468750'
2025-11-27 14:24:06 (31344): Guest Log:  *** Job finished ***
2025-11-27 14:24:06 (31344): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:02,883 | INFO     | PID=6053 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:02,883 | INFO     | found 0 job(s) in 20 queues
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:02,883 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:02,883 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:02,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:02,884 | INFO     | [monitor] control thread has ended
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,640 | INFO     | all workflow threads have been joined
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,640 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,640 | INFO     | traces error code: 0
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,640 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,682 [wrapper] ==== pilot stdout END ====
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,685 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,688 [wrapper] pilotpid: 6053
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,691 [wrapper] Pilot exit status: 0
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,701 [wrapper] pandaids: 6897507569
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,723 [wrapper] cleanup supervisor_pilot   397 6054
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,727 [wrapper] Test setup, not cleaning
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,730 [wrapper] apfmon messages muted
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,732 [wrapper] ==== wrapper stdout END ====
2025-11-27 14:24:06 (31344): Guest Log: 2025-11-27 13:24:05,735 [wrapper] ==== wrapper stderr END ====
2025-11-27 14:24:06 (31344): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 14:24:06 (31344): Guest Log:     "exeErrorCode": 0,
2025-11-27 14:24:06 (31344): Guest Log:     "exeErrorDiag": "",
2025-11-27 14:24:06 (31344): Guest Log:     "pilotErrorCode": 0,
2025-11-27 14:24:06 (31344): Guest Log:     "pilotErrorDiag": "",
2025-11-27 14:24:06 (31344): Guest Log:  *** Listing of results directory ***
2025-11-27 14:24:06 (31344): Guest Log: total 911540
2025-11-27 14:24:06 (31344): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 16:48 pilot3.tar.gz
2025-11-27 14:24:06 (31344): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 17:01 runpilot2-wrapper.sh
2025-11-27 14:24:06 (31344): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 17:02 queuedata.json
2025-11-27 14:24:06 (31344): Guest Log: -rwxr-xr-x. 1 atlas atlas      9331 Nov 27 06:29 init_data.xml
2025-11-27 14:24:06 (31344): Guest Log: -rwxr-xr-x. 1 atlas atlas    590109 Nov 27 06:29 input.tar.gz
2025-11-27 14:24:06 (31344): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 06:29 start_atlas.sh
2025-11-27 14:24:06 (31344): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 06:29 EVNT.47483658._002276.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 14:24:06 (31344): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 27 06:29 pandaJob.out
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas        49 Nov 27 06:29 setup.sh.local
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas    991554 Nov 27 06:30 agis_schedconf.cvmfs.json
2025-11-27 14:24:06 (31344): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 06:30 pilot3
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas 920467396 Nov 27 13:23 HITS.47556161._002597.pool.root.1
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas      1042 Nov 27 13:23 memory_monitor_summary.json
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 13:23 agis_ddmendpoints.agis.ALL.json
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas   1246878 Nov 27 13:23 log.47556161._002597.job.log.tgz.1
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas      8659 Nov 27 13:23 heartbeat.json
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 13:24 pilot_heartbeat.json
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 27 13:24 pilotlog.txt
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas   3304083 Nov 27 13:24 log.47556161._002597.job.log.1
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 13:24 output.list
2025-11-27 14:24:06 (31344): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 13:24 runtime_log
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas   4567040 Nov 27 13:24 result.tar.gz
2025-11-27 14:24:06 (31344): Guest Log: -rw-r--r--. 1 atlas atlas      9210 Nov 27 13:24 runtime_log.err
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas       652 Nov 27 13:24 nwqNDm5aBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmefJKDmfTED2n.diag
2025-11-27 14:24:06 (31344): Guest Log: Looking for outputfile HITS.47556161._002597.pool.root.1
2025-11-27 14:24:06 (31344): Guest Log: HITS file was successfully produced
2025-11-27 14:24:06 (31344): Guest Log: -rw-------. 1 atlas atlas 920467396 Nov 27 13:23 /home/atlas/RunAtlas/HITS.47556161._002597.pool.root.1
2025-11-27 14:24:09 (31344): Guest Log: Successfully finished the ATLAS job!
2025-11-27 14:24:09 (31344): Guest Log: Copying the results back to the shared directory!
2025-11-27 14:24:09 (31344): Guest Log:  *** Contents of shared directory: ***
2025-11-27 14:24:09 (31344): Guest Log: total 1308055
2025-11-27 14:24:09 (31344): Guest Log: -rwxrwxrwx. 1 root root 413796208 Nov 27 06:28 ATLAS.root_0
2025-11-27 14:24:09 (31344): Guest Log: -rwxrwxrwx. 1 root root 920467396 Nov 27 13:24 HITS.pool.root.1
2025-11-27 14:24:09 (31344): Guest Log: -rwxrwxrwx. 1 root root      9331 Nov 27 06:28 init_data.xml
2025-11-27 14:24:09 (31344): Guest Log: -rwxrwxrwx. 1 root root    590109 Nov 27 06:27 input.tar.gz
2025-11-27 14:24:09 (31344): Guest Log: -rwxrwxrwx. 1 root root   4567040 Nov 27 13:24 result.tar.gz
2025-11-27 14:24:09 (31344): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 27 06:27 start_atlas.sh
2025-11-27 14:24:09 (31344): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 14:24:09 (31344): VM Completion File Detected.
2025-11-27 14:24:09 (31344): Powering off VM.
2025-11-27 14:24:09 (31344): Successfully stopped VM.
2025-11-27 14:24:09 (31344): Deregistering VM. (boinc_d0cc2e228df84f66, slot#1)
2025-11-27 14:24:09 (31344): Removing network bandwidth throttle group from VM.
2025-11-27 14:24:10 (31344): Removing VM from VirtualBox.
2025-11-27 14:24:15 (31344): called boinc_finish(0)

</stderr_txt>
]]>

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