Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:21:28 (26241): wrapper (7.7.26015): starting
01:21:28 (26241): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 01:21:28] Arguments: --nthreads 12
[2025-11-27 01:21:28] Threads: 12
[2025-11-27 01:21:28] Checking for CVMFS
[2025-11-27 01:21:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:21:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:21:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:21:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:21:28] 2.11.2.0 2979 288769 93652 153349 0 82 18425113 20275200 1 130560 1 129191757 99.975 16083051 13910 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:21:28] CVMFS is ok
[2025-11-27 01:21:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:21:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:21:28] Further information can be found at the LHC@home message board.
[2025-11-27 01:21:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:21:28] Checking for apptainer binary...
[2025-11-27 01:21:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:21:28] Running /usr/bin/apptainer --version
[2025-11-27 01:21:28] apptainer version 1.3.2-1.el7
[2025-11-27 01:21:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:21:29] c-205-21.aglt2.org
[2025-11-27 01:21:29] apptainer works
[2025-11-27 01:21:29] Set ATHENA_PROC_NUMBER=12
[2025-11-27 01:21:29] Set ATHENA_CORE_NUMBER=12
[2025-11-27 01:21:29] Starting ATLAS job with PandaID=6898214307
[2025-11-27 01:21:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:26:39]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:26:39] 2025-11-27 13:26:07,131 | INFO     | monitor loop #1908: job 0:6898214307 is in state 'finished'
[2025-11-27 08:26:39] 2025-11-27 13:26:07,132 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,473 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 08:26:39] 2025-11-27 13:26:07,477 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2025-11-27 08:26:39] 2025-11-27 13:26:07,480 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898214307/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,481 | INFO     | extracted standard info from prmon json
[2025-11-27 08:26:39] 2025-11-27 13:26:07,481 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:26:39] 2025-11-27 13:26:07,481 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:26:39] 2025-11-27 13:26:07,488 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:26:39] 2025-11-27 13:26:07,489 | INFO     | sum of square deviations: 22484797599.453194
[2025-11-27 08:26:39] 2025-11-27 13:26:07,492 | INFO     | sum of deviations: 329018232877.525
[2025-11-27 08:26:39] 2025-11-27 13:26:07,492 | INFO     | mean x: 1764237223.266187
[2025-11-27 08:26:39] 2025-11-27 13:26:07,493 | INFO     | mean y: 3434534.6258992804
[2025-11-27 08:26:39] 2025-11-27 13:26:07,493 | INFO     | intersect: -25812506703.373447
[2025-11-27 08:26:39] 2025-11-27 13:26:07,493 | INFO     | chi2: 5.331170877509373
[2025-11-27 08:26:39] 2025-11-27 13:26:07,494 | INFO     | sum of square deviations: 21685690889.094578
[2025-11-27 08:26:39] 2025-11-27 13:26:07,497 | INFO     | sum of deviations: 474624873068.32983
[2025-11-27 08:26:39] 2025-11-27 13:26:07,498 | INFO     | mean x: 1764237070.7694175
[2025-11-27 08:26:39] 2025-11-27 13:26:07,498 | INFO     | mean y: 3462287.708737864
[2025-11-27 08:26:39] 2025-11-27 13:26:07,498 | INFO     | intersect: -38609593669.73223
[2025-11-27 08:26:39] 2025-11-27 13:26:07,498 | INFO     | chi2: 2.766174167064402
[2025-11-27 08:26:39] 2025-11-27 13:26:07,498 | INFO     | current chi2=2.766174167064402 (change=48.11319631989158 %)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,499 | INFO     | sum of square deviations: 20905747328.72727
[2025-11-27 08:26:39] 2025-11-27 13:26:07,502 | INFO     | sum of deviations: 524706095840.7268
[2025-11-27 08:26:39] 2025-11-27 13:26:07,503 | INFO     | mean x: 1764236918.2727273
[2025-11-27 08:26:39] 2025-11-27 13:26:07,503 | INFO     | mean y: 3472036.1646191645
[2025-11-27 08:26:39] 2025-11-27 13:26:07,503 | INFO     | intersect: -44276498010.776276
[2025-11-27 08:26:39] 2025-11-27 13:26:07,503 | INFO     | chi2: 2.2579374903494327
[2025-11-27 08:26:39] 2025-11-27 13:26:07,503 | INFO     | current chi2=2.2579374903494327 (change=18.37327102415733 %)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,503 | INFO     | right removable region: 406
[2025-11-27 08:26:39] 2025-11-27 13:26:07,504 | INFO     | sum of square deviations: 21685623179.09458
[2025-11-27 08:26:39] 2025-11-27 13:26:07,508 | INFO     | sum of deviations: 201262840552.09717
[2025-11-27 08:26:39] 2025-11-27 13:26:07,508 | INFO     | mean x: 1764237375.7694175
[2025-11-27 08:26:39] 2025-11-27 13:26:07,508 | INFO     | mean y: 3458825.7378640776
[2025-11-27 08:26:39] 2025-11-27 13:26:07,508 | INFO     | intersect: -16370312069.52657
[2025-11-27 08:26:39] 2025-11-27 13:26:07,508 | INFO     | chi2: 3.197000813688442
[2025-11-27 08:26:39] 2025-11-27 13:26:07,509 | INFO     | current chi2=3.197000813688442 (change=40.03192005764364 %)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,509 | INFO     | sum of square deviations: 20905611908.72727
[2025-11-27 08:26:39] 2025-11-27 13:26:07,513 | INFO     | sum of deviations: 170364493021.18234
[2025-11-27 08:26:39] 2025-11-27 13:26:07,513 | INFO     | mean x: 1764237528.2727273
[2025-11-27 08:26:39] 2025-11-27 13:26:07,513 | INFO     | mean y: 3464860.0073710075
[2025-11-27 08:26:39] 2025-11-27 13:26:07,513 | INFO     | intersect: -14373700151.252293
[2025-11-27 08:26:39] 2025-11-27 13:26:07,513 | INFO     | chi2: 3.14401233783574
[2025-11-27 08:26:39] 2025-11-27 13:26:07,514 | INFO     | current chi2=3.14401233783574 (change=1.6574433020418389 %)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,514 | INFO     | left removable region: 20
[2025-11-27 08:26:39] 2025-11-27 13:26:07,514 | INFO     | sum of square deviations: 17833751244.282234
[2025-11-27 08:26:39] 2025-11-27 13:26:07,517 | INFO     | sum of deviations: 324508174473.45874
[2025-11-27 08:26:39] 2025-11-27 13:26:07,517 | INFO     | mean x: 1764237497.7797928
[2025-11-27 08:26:39] 2025-11-27 13:26:07,518 | INFO     | mean y: 3511855.981865285
[2025-11-27 08:26:39] 2025-11-27 13:26:07,518 | INFO     | intersect: -32099071717.157204
[2025-11-27 08:26:39] 2025-11-27 13:26:07,518 | INFO     | chi2: 0.02859934075141993
[2025-11-27 08:26:39] 2025-11-27 13:26:07,518 | INFO     | current memory leak: 18.20 B/s (using 386 data points, chi2=0.03)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | could have reported an average CPU frequency of 2366 MHz (18 samples)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | ..............................
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | . Timing measurements:
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | . get job = 0 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | . initial setup = 2 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | . payload setup = 8 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | . stage-in = 0 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,519 | INFO     | . payload execution = 25421 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,520 | INFO     | . stage-out = 3 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,520 | INFO     | . log creation = 0 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,520 | INFO     | ..............................
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | 
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | job summary report
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | --------------------------------------------------
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | PanDA job id: 6898214307
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | task id: 47556161
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | errors: (none)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | pilot state: finished 
[2025-11-27 08:26:39] 2025-11-27 13:26:07,603 | INFO     | transexitcode: 0
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | exeerrorcode: 0
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | exeerrordiag: 
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | exitcode: 0
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | exitmsg: OK
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | cpuconsumptiontime: 291795 s
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | nevents: 1000
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | neventsw: 0
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | pid: 5048
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | pgrp: 5048
[2025-11-27 08:26:39] 2025-11-27 13:26:07,604 | INFO     | corecount: 12
[2025-11-27 08:26:39] 2025-11-27 13:26:07,605 | INFO     | event service: False
[2025-11-27 08:26:39] 2025-11-27 13:26:07,605 | INFO     | sizes: {0: 2283436, 1: 2284292, 6: 2284554, 12: 2284582, 25433: 2321706, 25437: 2330700, 25439: 2330884, 25447: 2331130}
[2025-11-27 08:26:39] 2025-11-27 13:26:07,605 | INFO     | --------------------------------------------------
[2025-11-27 08:26:39] 2025-11-27 13:26:07,605 | INFO     | 
[2025-11-27 08:26:39] 2025-11-27 13:26:07,605 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 08:26:39] 2025-11-27 13:26:07,628 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,629 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,629 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,629 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,629 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,629 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,630 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,630 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,630 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,630 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,630 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,630 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:26:39] 2025-11-27 13:26:07,632 | INFO     | job 6898214307 has completed (purged errors)
[2025-11-27 08:26:39] 2025-11-27 13:26:07,632 | INFO     | overall cleanup function is called
[2025-11-27 08:26:39] 2025-11-27 13:26:08,660 | INFO     | --- collectZombieJob: --- 10, [5048]
[2025-11-27 08:26:39] 2025-11-27 13:26:08,660 | INFO     | zombie collector waiting for pid 5048
[2025-11-27 08:26:39] 2025-11-27 13:26:08,661 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:26:39] 2025-11-27 13:26:08,661 | INFO     | collected zombie processes
[2025-11-27 08:26:39] 2025-11-27 13:26:08,661 | INFO     | will attempt to kill all subprocesses of pid=5048
[2025-11-27 08:26:39] 2025-11-27 13:26:08,754 | INFO     | process IDs to be killed: [5048] (in reverse order)
[2025-11-27 08:26:39] 2025-11-27 13:26:08,808 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:26:39] 2025-11-27 13:26:08,809 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:26:39] 2025-11-27 13:26:08,812 | INFO     | did not find any defunct processes belonging to 5048
[2025-11-27 08:26:39] 2025-11-27 13:26:08,814 | INFO     | did not find any defunct processes belonging to 5048
[2025-11-27 08:26:39] 2025-11-27 13:26:08,816 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:26:39] 2025-11-27 13:26:08,816 | INFO     | ready for new job
[2025-11-27 08:26:39] 2025-11-27 13:26:08,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:26:39] 2025-11-27 13:26:08,818 | INFO     | ***************************************
[2025-11-27 08:26:39] 2025-11-27 13:26:08,818 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:26:39] 2025-11-27 13:26:08,818 | INFO     | ***************************************
[2025-11-27 08:26:39] 2025-11-27 13:26:08,818 | INFO     | 
[2025-11-27 08:26:39] 2025-11-27 13:26:08,819 | INFO     | architecture information:
[2025-11-27 08:26:39] 2025-11-27 13:26:08,820 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:26:39] 2025-11-27 13:26:08,834 | INFO     | cat /etc/os-release:
[2025-11-27 08:26:39] NAME="CentOS Linux"
[2025-11-27 08:26:39] VERSION="7 (Core)"
[2025-11-27 08:26:39] ID="centos"
[2025-11-27 08:26:39] ID_LIKE="rhel fedora"
[2025-11-27 08:26:39] VERSION_ID="7"
[2025-11-27 08:26:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:26:39] ANSI_COLOR="0;31"
[2025-11-27 08:26:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:26:39] HOME_URL="https://www.centos.org/"
[2025-11-27 08:26:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:26:39] 
[2025-11-27 08:26:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:26:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:26:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:26:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:26:39] 
[2025-11-27 08:26:39] 2025-11-27 13:26:08,835 | INFO     | ***************************************
[2025-11-27 08:26:39] 2025-11-27 13:26:09,338 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 08:26:39] 2025-11-27 13:26:09,355 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-27 08:26:39] 2025-11-27 13:26:09,356 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:26:39] 2025-11-27 13:26:09,356 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:26:39] 2025-11-27 13:26:09,356 | INFO     | update_server=False
[2025-11-27 08:26:39] 2025-11-27 13:26:09,356 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:26:39] 2025-11-27 13:26:09,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:26:39] 2025-11-27 13:26:09,635 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:26:39] 2025-11-27 13:26:09,635 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:26:39] 2025-11-27 13:26:09,635 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:26:39] 2025-11-27 13:26:09,635 | INFO     | will abort loop
[2025-11-27 08:26:39] 2025-11-27 13:26:10,065 | INFO     | all payload control threads have been joined
[2025-11-27 08:26:39] 2025-11-27 13:26:10,200 | INFO     | all data control threads have been joined
[2025-11-27 08:26:39] 2025-11-27 13:26:10,362 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:10,362 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:10,473 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:10,487 | INFO     | [job] validate thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:10,573 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:10,600 | INFO     | all job control threads have been joined
[2025-11-27 08:26:39] 2025-11-27 13:26:10,641 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:10,700 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:26:39] 2025-11-27 13:26:10,819 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:26:39] 2025-11-27 13:26:11,068 | INFO     | [payload] control thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,188 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,206 | INFO     | [data] control thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,344 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,351 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,605 | INFO     | [job] control thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,664 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:11,734 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:12,825 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:14,706 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:26:39] 2025-11-27 13:26:26,367 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:26:39] 2025-11-27 13:26:26,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140365268170560)>', '<ExcThread(monitor, started 140364522432256)>']
[2025-11-27 08:26:39] 2025-11-27 13:26:32,001 | INFO     | all workflow threads have been joined
[2025-11-27 08:26:39] 2025-11-27 13:26:32,009 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:26:39] 2025-11-27 13:26:32,009 | INFO     | traces error code: 0
[2025-11-27 08:26:39] 2025-11-27 13:26:32,010 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:26:39] 2025-11-27 13:26:38,969 | INFO     | PID=30022 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 08:26:39] 2025-11-27 13:26:38,969 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:26:39] 2025-11-27 13:26:38,969 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:26:39] 2025-11-27 13:26:38,969 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:26:39] 2025-11-27 13:26:38,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:26:39] 2025-11-27 13:26:38,970 | INFO     | [monitor] control thread has ended
[2025-11-27 08:26:39] 2025-11-27 13:26:39,054 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:26:39] 2025-11-27 13:26:39,058 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:26:39] 2025-11-27 13:26:39,062 [wrapper] pilotpid: 30022
[2025-11-27 08:26:39] 2025-11-27 13:26:39,065 [wrapper] Pilot exit status: 0
[2025-11-27 08:26:39] 2025-11-27 13:26:39,081 [wrapper] pandaids: 6898214307
[2025-11-27 08:26:39] 2025-11-27 13:26:39,123 [wrapper] cleanup supervisor_pilot 28820 30023
[2025-11-27 08:26:39] 2025-11-27 13:26:39,127 [wrapper] Test setup, not cleaning
[2025-11-27 08:26:39] 2025-11-27 13:26:39,131 [wrapper] apfmon messages muted
[2025-11-27 08:26:39] 2025-11-27 13:26:39,135 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:26:39] 2025-11-27 13:26:39,139 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:26:39]  *** Error codes and diagnostics ***
[2025-11-27 08:26:39]     "exeErrorCode": 0,
[2025-11-27 08:26:39]     "exeErrorDiag": "",
[2025-11-27 08:26:39]     "pilotErrorCode": 0,
[2025-11-27 08:26:39]     "pilotErrorDiag": "",
[2025-11-27 08:26:39]  *** Listing of results directory ***
[2025-11-27 08:26:39] total 1306704
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 08:26:39] -rwx------ 1 boincer umatlas     36292 Nov 25 23:28 runpilot2-wrapper.sh
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:28 queuedata.json
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas       100 Nov 27 01:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:26:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 01:21 run_atlas
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas       105 Nov 27 01:21 job.xml
[2025-11-27 08:26:39] -rw-r--r-- 2 boincer umatlas 410844293 Nov 27 01:21 EVNT.47483658._002493.pool.root.1
[2025-11-27 08:26:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:21 start_atlas.sh
[2025-11-27 08:26:39] drwxrwx--x 2 boincer umatlas      4096 Nov 27 01:21 shared
[2025-11-27 08:26:39] -rw-r--r-- 2 boincer umatlas    590107 Nov 27 01:21 input.tar.gz
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas         0 Nov 27 01:21 boinc_lockfile
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 01:21 pandaJob.out
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas        57 Nov 27 01:21 setup.sh.local
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas    991554 Nov 27 01:21 agis_schedconf.cvmfs.json
[2025-11-27 08:26:39] drwx------ 5 boincer umatlas      4096 Nov 27 01:21 pilot3
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas       532 Nov 27 08:16 boinc_task_state.xml
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas      5956 Nov 27 08:20 init_data.xml
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas 911809194 Nov 27 08:25 HITS.47556161._004758.pool.root.1
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas      1062 Nov 27 08:25 memory_monitor_summary.json
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas        95 Nov 27 08:25 pilot_heartbeat.json
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas   1516240 Nov 27 08:25 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas   2184633 Nov 27 08:25 log.47556161._004758.job.log.tgz.1
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas      8678 Nov 27 08:26 heartbeat.json
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 08:26 boinc_mmap_file
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas        29 Nov 27 08:26 wrapper_checkpoint.txt
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas       745 Nov 27 08:26 pilotlog.txt
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas   3561154 Nov 27 08:26 log.47556161._004758.job.log.1
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas       353 Nov 27 08:26 output.list
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas       620 Nov 27 08:26 runtime_log
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas   5765120 Nov 27 08:26 result.tar.gz
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas       670 Nov 27 08:26 S1hNDmtJMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAwJKDmjoaw1n.diag
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 08:26 runtime_log.err
[2025-11-27 08:26:39] -rw-r--r-- 1 boincer umatlas     21315 Nov 27 08:26 stderr.txt
[2025-11-27 08:26:39] HITS file was successfully produced:
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas 911809194 Nov 27 08:25 shared/HITS.pool.root.1
[2025-11-27 08:26:39]  *** Contents of shared directory: ***
[2025-11-27 08:26:39] total 1297892
[2025-11-27 08:26:39] -rw-r--r-- 2 boincer umatlas 410844293 Nov 27 01:21 ATLAS.root_0
[2025-11-27 08:26:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:21 start_atlas.sh
[2025-11-27 08:26:39] -rw-r--r-- 2 boincer umatlas    590107 Nov 27 01:21 input.tar.gz
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas 911809194 Nov 27 08:25 HITS.pool.root.1
[2025-11-27 08:26:39] -rw------- 1 boincer umatlas   5765120 Nov 27 08:26 result.tar.gz
08:26:41 (26241): run_atlas exited; CPU time 285389.392656
08:26:41 (26241): called boinc_finish(0)

</stderr_txt>
]]>

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