Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:17:29 (9928): wrapper (7.7.26015): starting
01:17:29 (9928): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 01:17:29] Arguments: --nthreads 12
[2025-11-27 01:17:29] Threads: 12
[2025-11-27 01:17:29] Checking for CVMFS
[2025-11-27 01:17:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:17:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:17:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:17:30] 2.11.2.0 3081 288704 94956 153349 3 82 10215029 20275200 1 130560 1 130082727 99.965 16902192 14379 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:17:30] CVMFS is ok
[2025-11-27 01:17:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:17:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:17:30] Further information can be found at the LHC@home message board.
[2025-11-27 01:17:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:17:30] Checking for apptainer binary...
[2025-11-27 01:17:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:17:30] Running /usr/bin/apptainer --version
[2025-11-27 01:17:30] apptainer version 1.3.2-1.el7
[2025-11-27 01:17:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:17:31] c-205-29.aglt2.org
[2025-11-27 01:17:31] apptainer works
[2025-11-27 01:17:31] Set ATHENA_PROC_NUMBER=12
[2025-11-27 01:17:31] Set ATHENA_CORE_NUMBER=12
[2025-11-27 01:17:31] Starting ATLAS job with PandaID=6898214245
[2025-11-27 01:17:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:35:34]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:35:34] 2025-11-27 13:34:55,644 | INFO     | time since job start (26229s) is within the limit (172800.0s)
[2025-11-27 08:35:34] 2025-11-27 13:34:56,285 | INFO     | monitor loop #1966: job 0:6898214245 is in state 'finished'
[2025-11-27 08:35:34] 2025-11-27 13:34:56,285 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:35:34] 2025-11-27 13:34:57,649 | INFO     | time since job start (26231s) is within the limit (172800.0s)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,139 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 08:35:34] 2025-11-27 13:34:58,142 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1729.0833333333333
[2025-11-27 08:35:34] 2025-11-27 13:34:58,144 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898214245/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,145 | INFO     | extracted standard info from prmon json
[2025-11-27 08:35:34] 2025-11-27 13:34:58,145 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:35:34] 2025-11-27 13:34:58,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:35:34] 2025-11-27 13:34:58,151 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:35:34] 2025-11-27 13:34:58,152 | INFO     | sum of square deviations: 24653614564.87448
[2025-11-27 08:35:34] 2025-11-27 13:34:58,156 | INFO     | sum of deviations: 398316848751.36285
[2025-11-27 08:35:34] 2025-11-27 13:34:58,156 | INFO     | mean x: 1764237379.7488372
[2025-11-27 08:35:34] 2025-11-27 13:34:58,156 | INFO     | mean y: 3464193.2255813954
[2025-11-27 08:35:34] 2025-11-27 13:34:58,156 | INFO     | intersect: -28500488916.844307
[2025-11-27 08:35:34] 2025-11-27 13:34:58,157 | INFO     | chi2: 6.782048929482748
[2025-11-27 08:35:34] 2025-11-27 13:34:58,157 | INFO     | sum of square deviations: 23803594052.061195
[2025-11-27 08:35:34] 2025-11-27 13:34:58,161 | INFO     | sum of deviations: 578908752032.3083
[2025-11-27 08:35:34] 2025-11-27 13:34:58,161 | INFO     | mean x: 1764237227.2517648
[2025-11-27 08:35:34] 2025-11-27 13:34:58,161 | INFO     | mean y: 3496565.9223529412
[2025-11-27 08:35:34] 2025-11-27 13:34:58,162 | INFO     | intersect: -42903148929.85815
[2025-11-27 08:35:34] 2025-11-27 13:34:58,162 | INFO     | chi2: 3.2736977362009663
[2025-11-27 08:35:34] 2025-11-27 13:34:58,162 | INFO     | current chi2=3.2736977362009663 (change=51.72995992450553 %)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,163 | INFO     | sum of square deviations: 22973341351.74052
[2025-11-27 08:35:34] 2025-11-27 13:34:58,166 | INFO     | sum of deviations: 633788737337.2837
[2025-11-27 08:35:34] 2025-11-27 13:34:58,167 | INFO     | mean x: 1764237074.754762
[2025-11-27 08:35:34] 2025-11-27 13:34:58,167 | INFO     | mean y: 3506605.9833333334
[2025-11-27 08:35:34] 2025-11-27 13:34:58,167 | INFO     | intersect: -48668280873.80046
[2025-11-27 08:35:34] 2025-11-27 13:34:58,167 | INFO     | chi2: 2.71477538713053
[2025-11-27 08:35:34] 2025-11-27 13:34:58,167 | INFO     | current chi2=2.71477538713053 (change=17.073120187297746 %)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,168 | INFO     | right removable region: 419
[2025-11-27 08:35:34] 2025-11-27 13:34:58,168 | INFO     | sum of square deviations: 23803528782.061184
[2025-11-27 08:35:34] 2025-11-27 13:34:58,172 | INFO     | sum of deviations: 246591679467.32495
[2025-11-27 08:35:34] 2025-11-27 13:34:58,172 | INFO     | mean x: 1764237532.2517648
[2025-11-27 08:35:34] 2025-11-27 13:34:58,172 | INFO     | mean y: 3491342.5670588235
[2025-11-27 08:35:34] 2025-11-27 13:34:58,172 | INFO     | intersect: -18273054964.51289
[2025-11-27 08:35:34] 2025-11-27 13:34:58,173 | INFO     | chi2: 4.31521168363605
[2025-11-27 08:35:34] 2025-11-27 13:34:58,173 | INFO     | current chi2=4.31521168363605 (change=36.37303817026337 %)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,173 | INFO     | sum of square deviations: 22973236614.247566
[2025-11-27 08:35:34] 2025-11-27 13:34:58,177 | INFO     | sum of deviations: 205040317142.98105
[2025-11-27 08:35:34] 2025-11-27 13:34:58,177 | INFO     | mean x: 1764237684.7523808
[2025-11-27 08:35:34] 2025-11-27 13:34:58,177 | INFO     | mean y: 3498967.269047619
[2025-11-27 08:35:34] 2025-11-27 13:34:58,177 | INFO     | intersect: -15742643401.407145
[2025-11-27 08:35:34] 2025-11-27 13:34:58,178 | INFO     | chi2: 4.219389951382789
[2025-11-27 08:35:34] 2025-11-27 13:34:58,178 | INFO     | current chi2=4.219389951382789 (change=2.2205569338957685 %)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,178 | INFO     | left removable region: 20
[2025-11-27 08:35:34] 2025-11-27 13:34:58,179 | INFO     | sum of square deviations: 19696810282.937107
[2025-11-27 08:35:34] 2025-11-27 13:34:58,182 | INFO     | sum of deviations: 380698743957.89734
[2025-11-27 08:35:34] 2025-11-27 13:34:58,182 | INFO     | mean x: 1764237654.2506266
[2025-11-27 08:35:34] 2025-11-27 13:34:58,182 | INFO     | mean y: 3554178.411027569
[2025-11-27 08:35:34] 2025-11-27 13:34:58,182 | INFO     | intersect: -34095523254.35836
[2025-11-27 08:35:34] 2025-11-27 13:34:58,183 | INFO     | chi2: 0.06063560578729644
[2025-11-27 08:35:34] 2025-11-27 13:34:58,183 | INFO     | current memory leak: 19.33 B/s (using 399 data points, chi2=0.06)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | could have reported an average CPU frequency of 2427 MHz (18 samples)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | ..............................
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . Timing measurements:
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . get job = 0 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . initial setup = 2 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . payload setup = 7 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . stage-in = 0 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . payload execution = 26195 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,184 | INFO     | . stage-out = 3 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,185 | INFO     | . log creation = 0 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,185 | INFO     | ..............................
[2025-11-27 08:35:34] 2025-11-27 13:34:58,747 | INFO     | 
[2025-11-27 08:35:34] 2025-11-27 13:34:58,747 | INFO     | job summary report
[2025-11-27 08:35:34] 2025-11-27 13:34:58,747 | INFO     | --------------------------------------------------
[2025-11-27 08:35:34] 2025-11-27 13:34:58,748 | INFO     | PanDA job id: 6898214245
[2025-11-27 08:35:34] 2025-11-27 13:34:58,748 | INFO     | task id: 47556161
[2025-11-27 08:35:34] 2025-11-27 13:34:58,748 | INFO     | errors: (none)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:35:34] 2025-11-27 13:34:58,748 | INFO     | pilot state: finished 
[2025-11-27 08:35:34] 2025-11-27 13:34:58,748 | INFO     | transexitcode: 0
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | exeerrorcode: 0
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | exeerrordiag: 
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | exitcode: 0
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | exitmsg: OK
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | cpuconsumptiontime: 300399 s
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | nevents: 1000
[2025-11-27 08:35:34] 2025-11-27 13:34:58,749 | INFO     | neventsw: 0
[2025-11-27 08:35:34] 2025-11-27 13:34:58,750 | INFO     | pid: 20081
[2025-11-27 08:35:34] 2025-11-27 13:34:58,750 | INFO     | pgrp: 20081
[2025-11-27 08:35:34] 2025-11-27 13:34:58,750 | INFO     | corecount: 12
[2025-11-27 08:35:34] 2025-11-27 13:34:58,750 | INFO     | event service: False
[2025-11-27 08:35:34] 2025-11-27 13:34:58,750 | INFO     | sizes: {0: 2284264, 5: 2284526, 11: 2284582, 26207: 2321987, 26211: 2331037, 26217: 2331227}
[2025-11-27 08:35:34] 2025-11-27 13:34:58,750 | INFO     | --------------------------------------------------
[2025-11-27 08:35:34] 2025-11-27 13:34:58,751 | INFO     | 
[2025-11-27 08:35:34] 2025-11-27 13:34:58,751 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 08:35:34] 2025-11-27 13:34:58,799 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,799 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,799 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,799 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,800 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,800 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,800 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,800 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,800 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,800 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,801 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,801 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,801 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,801 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,801 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,801 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,802 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,802 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,802 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,802 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:35:34] 2025-11-27 13:34:58,802 | INFO     | job 6898214245 has completed (purged errors)
[2025-11-27 08:35:34] 2025-11-27 13:34:58,803 | INFO     | overall cleanup function is called
[2025-11-27 08:35:34] 2025-11-27 13:34:59,818 | INFO     | --- collectZombieJob: --- 10, [20081]
[2025-11-27 08:35:34] 2025-11-27 13:34:59,818 | INFO     | zombie collector waiting for pid 20081
[2025-11-27 08:35:34] 2025-11-27 13:34:59,825 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:35:34] 2025-11-27 13:34:59,825 | INFO     | collected zombie processes
[2025-11-27 08:35:34] 2025-11-27 13:34:59,825 | INFO     | will attempt to kill all subprocesses of pid=20081
[2025-11-27 08:35:34] 2025-11-27 13:34:59,922 | INFO     | process IDs to be killed: [20081] (in reverse order)
[2025-11-27 08:35:34] 2025-11-27 13:34:59,979 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:35:34] 2025-11-27 13:34:59,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:35:34] 2025-11-27 13:34:59,983 | INFO     | did not find any defunct processes belonging to 20081
[2025-11-27 08:35:34] 2025-11-27 13:34:59,986 | INFO     | did not find any defunct processes belonging to 20081
[2025-11-27 08:35:34] 2025-11-27 13:34:59,988 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:35:34] 2025-11-27 13:34:59,989 | INFO     | ready for new job
[2025-11-27 08:35:34] 2025-11-27 13:34:59,989 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:35:34] 2025-11-27 13:34:59,992 | INFO     | ***************************************
[2025-11-27 08:35:34] 2025-11-27 13:34:59,992 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:35:34] 2025-11-27 13:34:59,992 | INFO     | ***************************************
[2025-11-27 08:35:34] 2025-11-27 13:34:59,992 | INFO     | 
[2025-11-27 08:35:34] 2025-11-27 13:34:59,993 | INFO     | architecture information:
[2025-11-27 08:35:34] 2025-11-27 13:34:59,994 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:35:34] 2025-11-27 13:35:00,010 | INFO     | cat /etc/os-release:
[2025-11-27 08:35:34] NAME="CentOS Linux"
[2025-11-27 08:35:34] VERSION="7 (Core)"
[2025-11-27 08:35:34] ID="centos"
[2025-11-27 08:35:34] ID_LIKE="rhel fedora"
[2025-11-27 08:35:34] VERSION_ID="7"
[2025-11-27 08:35:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:35:34] ANSI_COLOR="0;31"
[2025-11-27 08:35:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:35:34] HOME_URL="https://www.centos.org/"
[2025-11-27 08:35:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:35:34] 
[2025-11-27 08:35:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:35:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:35:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:35:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:35:34] 
[2025-11-27 08:35:34] 2025-11-27 13:35:00,010 | INFO     | ***************************************
[2025-11-27 08:35:34] 2025-11-27 13:35:00,512 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 08:35:34] 2025-11-27 13:35:00,531 | INFO     | sufficient remaining disk space (28220325888 B)
[2025-11-27 08:35:34] 2025-11-27 13:35:00,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:35:34] 2025-11-27 13:35:00,532 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:35:34] 2025-11-27 13:35:00,532 | INFO     | update_server=False
[2025-11-27 08:35:34] 2025-11-27 13:35:00,532 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:35:34] 2025-11-27 13:35:00,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:35:34] 2025-11-27 13:35:00,532 | INFO     | aborting loop
[2025-11-27 08:35:34] 2025-11-27 13:35:00,722 | INFO     | all payload control threads have been joined
[2025-11-27 08:35:34] 2025-11-27 13:35:00,875 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:35:34] 2025-11-27 13:35:01,097 | INFO     | all data control threads have been joined
[2025-11-27 08:35:34] 2025-11-27 13:35:01,403 | INFO     | all job control threads have been joined
[2025-11-27 08:35:34] 2025-11-27 13:35:01,537 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:01,538 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:01,624 | INFO     | [job] validate thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:01,727 | INFO     | [payload] control thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:01,923 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:01,932 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:01,938 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,103 | INFO     | [data] control thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,103 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,128 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,408 | INFO     | [job] control thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,726 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:02,881 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:03,273 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:35:34] 2025-11-27 13:35:03,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:35:34] 2025-11-27 13:35:04,278 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:07,460 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:35:34] 2025-11-27 13:35:28,324 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:35:34] 2025-11-27 13:35:29,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998598289216)>', '<ExcThread(monitor, started 139997898315520)>']
[2025-11-27 08:35:34] 2025-11-27 13:35:30,844 | INFO     | PID=13641 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 08:35:34] 2025-11-27 13:35:30,845 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:35:34] 2025-11-27 13:35:30,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:35:34] 2025-11-27 13:35:30,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:35:34] 2025-11-27 13:35:30,845 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:35:34] 2025-11-27 13:35:30,845 | INFO     | [monitor] control thread has ended
[2025-11-27 08:35:34] 2025-11-27 13:35:34,278 | INFO     | all workflow threads have been joined
[2025-11-27 08:35:34] 2025-11-27 13:35:34,279 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:35:34] 2025-11-27 13:35:34,279 | INFO     | traces error code: 0
[2025-11-27 08:35:34] 2025-11-27 13:35:34,280 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:35:34] 2025-11-27 13:35:34,383 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:35:34] 2025-11-27 13:35:34,387 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:35:34] 2025-11-27 13:35:34,391 [wrapper] pilotpid: 13641
[2025-11-27 08:35:34] 2025-11-27 13:35:34,394 [wrapper] Pilot exit status: 0
[2025-11-27 08:35:34] 2025-11-27 13:35:34,409 [wrapper] pandaids: 6898214245
[2025-11-27 08:35:34] 2025-11-27 13:35:34,449 [wrapper] cleanup supervisor_pilot 18536 13642
[2025-11-27 08:35:34] 2025-11-27 13:35:34,453 [wrapper] Test setup, not cleaning
[2025-11-27 08:35:34] 2025-11-27 13:35:34,457 [wrapper] apfmon messages muted
[2025-11-27 08:35:34] 2025-11-27 13:35:34,461 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:35:34] 2025-11-27 13:35:34,465 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:35:34]  *** Error codes and diagnostics ***
[2025-11-27 08:35:34]     "exeErrorCode": 0,
[2025-11-27 08:35:34]     "exeErrorDiag": "",
[2025-11-27 08:35:34]     "pilotErrorCode": 0,
[2025-11-27 08:35:34]     "pilotErrorDiag": "",
[2025-11-27 08:35:34]  *** Listing of results directory ***
[2025-11-27 08:35:34] total 1337528
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:31 queuedata.json
[2025-11-27 08:35:34] -rwx------ 1 boincer umatlas     36292 Nov 25 23:31 runpilot2-wrapper.sh
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas       100 Nov 27 01:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:35:34] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 01:17 run_atlas
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas       105 Nov 27 01:17 job.xml
[2025-11-27 08:35:34] -rw-r--r-- 2 boincer umatlas 411629125 Nov 27 01:17 EVNT.47483658._002489.pool.root.1
[2025-11-27 08:35:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:17 start_atlas.sh
[2025-11-27 08:35:34] drwxrwx--x 2 boincer umatlas      4096 Nov 27 01:17 shared
[2025-11-27 08:35:34] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 01:17 input.tar.gz
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas         0 Nov 27 01:17 boinc_lockfile
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 01:17 pandaJob.out
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas        57 Nov 27 01:17 setup.sh.local
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas    991578 Nov 27 01:17 agis_schedconf.cvmfs.json
[2025-11-27 08:35:34] drwx------ 5 boincer umatlas      4096 Nov 27 01:17 pilot3
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas       532 Nov 27 08:25 boinc_task_state.xml
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas      5955 Nov 27 08:27 init_data.xml
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas 942321154 Nov 27 08:34 HITS.47556161._004716.pool.root.1
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas      1060 Nov 27 08:34 memory_monitor_summary.json
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas   1516240 Nov 27 08:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas   2199078 Nov 27 08:34 log.47556161._004716.job.log.tgz.1
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas      8666 Nov 27 08:34 heartbeat.json
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 08:35 boinc_mmap_file
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas        29 Nov 27 08:35 wrapper_checkpoint.txt
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas        95 Nov 27 08:35 pilot_heartbeat.json
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas      4746 Nov 27 08:35 pilotlog.txt
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas   3681318 Nov 27 08:35 log.47556161._004716.job.log.1
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas       353 Nov 27 08:35 output.list
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas       620 Nov 27 08:35 runtime_log
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas   5898240 Nov 27 08:35 result.tar.gz
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas       670 Nov 27 08:35 V8GKDm0MMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmywMKDmQDSGgn.diag
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas      9345 Nov 27 08:35 runtime_log.err
[2025-11-27 08:35:34] -rw-r--r-- 1 boincer umatlas     21304 Nov 27 08:35 stderr.txt
[2025-11-27 08:35:34] HITS file was successfully produced:
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas 942321154 Nov 27 08:34 shared/HITS.pool.root.1
[2025-11-27 08:35:34]  *** Contents of shared directory: ***
[2025-11-27 08:35:34] total 1328584
[2025-11-27 08:35:34] -rw-r--r-- 2 boincer umatlas 411629125 Nov 27 01:17 ATLAS.root_0
[2025-11-27 08:35:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:17 start_atlas.sh
[2025-11-27 08:35:34] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 01:17 input.tar.gz
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas 942321154 Nov 27 08:34 HITS.pool.root.1
[2025-11-27 08:35:34] -rw------- 1 boincer umatlas   5898240 Nov 27 08:35 result.tar.gz
08:35:36 (9928): run_atlas exited; CPU time 293448.194100
08:35:36 (9928): called boinc_finish(0)

</stderr_txt>
]]>

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