Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
04:35:57 (261505): wrapper (7.7.26015): starting
04:35:57 (261505): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 04:35:57] Arguments: --nthreads 8
[2025-11-27 04:35:57] Threads: 8
[2025-11-27 04:35:57] Checking for CVMFS
[2025-11-27 04:35:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:35:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:35:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:35:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:35:57] 2.11.3.0 1658007 5573 86524 153362 3 253 3361001 4096001 2817 130560 0 9131290 99.919 674527 714 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-27 04:35:57] CVMFS is ok
[2025-11-27 04:35:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:35:57] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-27 04:35:57] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-27 04:35:57] Further information can be found at the LHC@home message board.
[2025-11-27 04:35:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:35:57] Checking for apptainer binary...
[2025-11-27 04:35:57] apptainer is not installed, using version from CVMFS
[2025-11-27 04:35:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:35:57] officedc-System-Product-Name
[2025-11-27 04:35:57] apptainer works
[2025-11-27 04:35:57] Set ATHENA_PROC_NUMBER=8
[2025-11-27 04:35:57] Set ATHENA_CORE_NUMBER=8
[2025-11-27 04:35:57] Starting ATLAS job with PandaID=6898214340
[2025-11-27 04:35:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:14:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:14:47] 2025-11-27 17:13:55,522 | INFO     | monitor loop #1500: job 0:6898214340 is in state 'finished'
[2025-11-27 10:14:47] 2025-11-27 17:13:55,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:14:47] 2025-11-27 17:13:55,604 | INFO     | time since job start (20267s) is within the limit (172800.0s)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,329 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 10:14:47] 2025-11-27 17:13:57,333 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3943.6740937499994
[2025-11-27 10:14:47] 2025-11-27 17:13:57,337 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6898214340/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,338 | INFO     | extracted standard info from prmon json
[2025-11-27 10:14:47] 2025-11-27 17:13:57,338 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:14:47] 2025-11-27 17:13:57,338 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:14:47] 2025-11-27 17:13:57,342 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:14:47] 2025-11-27 17:13:57,342 | INFO     | sum of square deviations: 11347015720.2741
[2025-11-27 10:14:47] 2025-11-27 17:13:57,344 | INFO     | sum of deviations: 154588776029.31625
[2025-11-27 10:14:47] 2025-11-27 17:13:57,344 | INFO     | mean x: 1764253485.8042169
[2025-11-27 10:14:47] 2025-11-27 17:13:57,344 | INFO     | mean y: 2867263.7740963856
[2025-11-27 10:14:47] 2025-11-27 17:13:57,345 | INFO     | intersect: -24032861045.707825
[2025-11-27 10:14:47] 2025-11-27 17:13:57,345 | INFO     | chi2: 4.29854680634362
[2025-11-27 10:14:47] 2025-11-27 17:13:57,345 | INFO     | sum of square deviations: 10842031001.418985
[2025-11-27 10:14:47] 2025-11-27 17:13:57,347 | INFO     | sum of deviations: 228677080036.74628
[2025-11-27 10:14:47] 2025-11-27 17:13:57,347 | INFO     | mean x: 1764253333.3058105
[2025-11-27 10:14:47] 2025-11-27 17:13:57,347 | INFO     | mean y: 2889522.7125382265
[2025-11-27 10:14:47] 2025-11-27 17:13:57,347 | INFO     | intersect: -37208247454.5445
[2025-11-27 10:14:47] 2025-11-27 17:13:57,348 | INFO     | chi2: 2.151061768280397
[2025-11-27 10:14:47] 2025-11-27 17:13:57,348 | INFO     | current chi2=2.151061768280397 (change=49.95839605361636 %)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,348 | INFO     | sum of square deviations: 10352275573.444115
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | sum of deviations: 221982202720.14597
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | mean x: 1764253180.810559
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | mean y: 2887438.133540373
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | intersect: -37827713617.05639
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | chi2: 2.150820914592755
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | current chi2=2.150820914592755 (change=0.011196967525237276 %)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,350 | INFO     | right removable region: 321
[2025-11-27 10:14:47] 2025-11-27 17:13:57,351 | INFO     | sum of square deviations: 10841989399.804329
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | sum of deviations: 69347492793.11922
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | mean x: 1764253638.3088684
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | mean y: 2892900.889908257
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | intersect: -11281619743.078058
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | chi2: 2.230390265406103
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | current chi2=2.230390265406103 (change=48.11292360212098 %)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,353 | INFO     | sum of square deviations: 10352212682.062143
[2025-11-27 10:14:47] 2025-11-27 17:13:57,355 | INFO     | sum of deviations: 58685909871.391304
[2025-11-27 10:14:47] 2025-11-27 17:13:57,355 | INFO     | mean x: 1764253790.8074534
[2025-11-27 10:14:47] 2025-11-27 17:13:57,355 | INFO     | mean y: 2896212.586956522
[2025-11-27 10:14:47] 2025-11-27 17:13:57,355 | INFO     | intersect: -9998524946.098349
[2025-11-27 10:14:47] 2025-11-27 17:13:57,356 | INFO     | chi2: 2.219924536706786
[2025-11-27 10:14:47] 2025-11-27 17:13:57,356 | INFO     | current chi2=2.219924536706786 (change=0.46923306928133973 %)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,356 | INFO     | left removable region: 20
[2025-11-27 10:14:47] 2025-11-27 17:13:57,356 | INFO     | sum of square deviations: 8456035027.488378
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | sum of deviations: 114720644679.37209
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | mean x: 1764253760.3023255
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | mean y: 2921560.7541528237
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | intersect: -23932212116.193867
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | chi2: 0.0302614326497554
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | current memory leak: 13.57 B/s (using 301 data points, chi2=0.03)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,358 | INFO     | could have reported an average CPU frequency of 3977 MHz (15 samples)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | ..............................
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . Timing measurements:
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . get job = 0 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . initial setup = 5 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . payload setup = 4 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . stage-in = 0 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . payload execution = 20238 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . stage-out = 3 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | . log creation = 0 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,359 | INFO     | ..............................
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | 
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | job summary report
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | --------------------------------------------------
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | PanDA job id: 6898214340
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | task id: 47556173
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | errors: (none)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,423 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | pilot state: finished 
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | transexitcode: 0
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | exeerrorcode: 0
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | exeerrordiag: 
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | exitcode: 0
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | exitmsg: OK
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | cpuconsumptiontime: 153085 s
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | nevents: 1000
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | neventsw: 0
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | pid: 272011
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | pgrp: 272011
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | corecount: 8
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | event service: False
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | sizes: {0: 2284157, 1: 2284299, 3: 2284561, 11: 2284589, 20245: 2319008, 20249: 2328016, 20251: 2328200, 20255: 2328446}
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | --------------------------------------------------
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | 
[2025-11-27 10:14:47] 2025-11-27 17:13:57,424 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-11-27 10:14:47] 2025-11-27 17:13:57,440 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,441 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,442 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,442 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,442 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:14:47] 2025-11-27 17:13:57,442 | INFO     | job 6898214340 has completed (purged errors)
[2025-11-27 10:14:47] 2025-11-27 17:13:57,442 | INFO     | overall cleanup function is called
[2025-11-27 10:14:47] 2025-11-27 17:13:58,457 | INFO     | --- collectZombieJob: --- 10, [272011]
[2025-11-27 10:14:47] 2025-11-27 17:13:58,457 | INFO     | zombie collector waiting for pid 272011
[2025-11-27 10:14:47] 2025-11-27 17:13:58,457 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:14:47] 2025-11-27 17:13:58,457 | INFO     | collected zombie processes
[2025-11-27 10:14:47] 2025-11-27 17:13:58,457 | INFO     | will attempt to kill all subprocesses of pid=272011
[2025-11-27 10:14:47] 2025-11-27 17:13:58,588 | INFO     | process IDs to be killed: [272011] (in reverse order)
[2025-11-27 10:14:47] 2025-11-27 17:13:58,639 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:14:47] 2025-11-27 17:13:58,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:14:47] 2025-11-27 17:13:58,643 | INFO     | did not find any defunct processes belonging to 272011
[2025-11-27 10:14:47] 2025-11-27 17:13:58,646 | INFO     | did not find any defunct processes belonging to 272011
[2025-11-27 10:14:47] 2025-11-27 17:13:58,647 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:14:47] 2025-11-27 17:13:58,647 | INFO     | ready for new job
[2025-11-27 10:14:47] 2025-11-27 17:13:58,647 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:14:47] 2025-11-27 17:13:58,649 | INFO     | ***************************************
[2025-11-27 10:14:47] 2025-11-27 17:13:58,649 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:14:47] 2025-11-27 17:13:58,649 | INFO     | ***************************************
[2025-11-27 10:14:47] 2025-11-27 17:13:58,649 | INFO     | 
[2025-11-27 10:14:47] 2025-11-27 17:13:58,651 | INFO     | architecture information:
[2025-11-27 10:14:47] 2025-11-27 17:13:58,651 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:14:47] 2025-11-27 17:13:58,661 | INFO     | cat /etc/os-release:
[2025-11-27 10:14:47] NAME="CentOS Linux"
[2025-11-27 10:14:47] VERSION="7 (Core)"
[2025-11-27 10:14:47] ID="centos"
[2025-11-27 10:14:47] ID_LIKE="rhel fedora"
[2025-11-27 10:14:47] VERSION_ID="7"
[2025-11-27 10:14:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:14:47] ANSI_COLOR="0;31"
[2025-11-27 10:14:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:14:47] HOME_URL="https://www.centos.org/"
[2025-11-27 10:14:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:14:47] 
[2025-11-27 10:14:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:14:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:14:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:14:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:14:47] 
[2025-11-27 10:14:47] 2025-11-27 17:13:58,661 | INFO     | ***************************************
[2025-11-27 10:14:47] 2025-11-27 17:13:59,164 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-11-27 10:14:47] 2025-11-27 17:13:59,178 | INFO     | sufficient remaining disk space (379526840320 B)
[2025-11-27 10:14:47] 2025-11-27 17:13:59,178 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:14:47] 2025-11-27 17:13:59,178 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:14:47] 2025-11-27 17:13:59,178 | INFO     | update_server=False
[2025-11-27 10:14:47] 2025-11-27 17:13:59,178 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:14:47] 2025-11-27 17:13:59,179 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:14:47] 2025-11-27 17:13:59,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:14:47] 2025-11-27 17:13:59,179 | INFO     | aborting loop
[2025-11-27 10:14:47] 2025-11-27 17:13:59,419 | INFO     | all job control threads have been joined
[2025-11-27 10:14:47] 2025-11-27 17:13:59,604 | INFO     | all data control threads have been joined
[2025-11-27 10:14:47] 2025-11-27 17:13:59,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:14:47] 2025-11-27 17:13:59,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:14:47] 2025-11-27 17:14:00,179 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,183 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,184 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,189 | INFO     | all payload control threads have been joined
[2025-11-27 10:14:47] 2025-11-27 17:14:00,424 | INFO     | [job] control thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,585 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,608 | INFO     | [data] control thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,840 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:00,995 | INFO     | [job] validate thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,027 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,094 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,095 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,173 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,194 | INFO     | [payload] control thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,450 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:01,752 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:03,715 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:14:47] 2025-11-27 17:14:28,830 | INFO     | PID=265347 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 10:14:47] 2025-11-27 17:14:28,831 | INFO     | .. there are 4 such processes running
[2025-11-27 10:14:47] 2025-11-27 17:14:28,831 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:14:47] 2025-11-27 17:14:28,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:14:47] 2025-11-27 17:14:28,831 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:14:47] 2025-11-27 17:14:41,503 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:14:47] 2025-11-27 17:14:41,905 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 124025829721920)>', '<ExcThread(monitor, started 124025133053696)>']
[2025-11-27 10:14:47] 2025-11-27 17:14:42,892 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:14:47] 2025-11-27 17:14:42,892 | INFO     | [monitor] control thread has ended
[2025-11-27 10:14:47] 2025-11-27 17:14:46,930 | INFO     | all workflow threads have been joined
[2025-11-27 10:14:47] 2025-11-27 17:14:46,930 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:14:47] 2025-11-27 17:14:46,931 | INFO     | traces error code: 0
[2025-11-27 10:14:47] 2025-11-27 17:14:46,931 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:14:47] 2025-11-27 17:14:47,005 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:14:47] 2025-11-27 17:14:47,007 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:14:47] 2025-11-27 17:14:47,009 [wrapper] pilotpid: 265347
[2025-11-27 10:14:47] 2025-11-27 17:14:47,010 [wrapper] Pilot exit status: 0
[2025-11-27 10:14:47] 2025-11-27 17:14:47,018 [wrapper] pandaids: 6898214340
[2025-11-27 10:14:47] 2025-11-27 17:14:47,051 [wrapper] cleanup supervisor_pilot  442423 265348
[2025-11-27 10:14:47] 2025-11-27 17:14:47,053 [wrapper] Test setup, not cleaning
[2025-11-27 10:14:47] 2025-11-27 17:14:47,054 [wrapper] apfmon messages muted
[2025-11-27 10:14:47] 2025-11-27 17:14:47,056 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:14:47] 2025-11-27 17:14:47,058 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:14:47]  *** Error codes and diagnostics ***
[2025-11-27 10:14:47]     "exeErrorCode": 0,
[2025-11-27 10:14:47]     "exeErrorDiag": "",
[2025-11-27 10:14:47]     "pilotErrorCode": 0,
[2025-11-27 10:14:47]     "pilotErrorDiag": "",
[2025-11-27 10:14:47]  *** Listing of results directory ***
[2025-11-27 10:14:47] total 1315056
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc    576529 Nov 25 20:33 pilot3.tar.gz
[2025-11-27 10:14:47] -rwx------ 1 boinc boinc     36292 Nov 25 21:28 runpilot2-wrapper.sh
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc      5112 Nov 25 21:28 queuedata.json
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc       100 Nov 27 04:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:14:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 04:35 run_atlas
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc       105 Nov 27 04:35 job.xml
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc      9772 Nov 27 04:35 init_data.xml
[2025-11-27 10:14:47] -rw-r--r-- 2 boinc boinc 408914674 Nov 27 04:35 EVNT.47483658._003179.pool.root.1
[2025-11-27 10:14:47] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:35 start_atlas.sh
[2025-11-27 10:14:47] drwxrwx--x 2 boinc boinc      4096 Nov 27 04:35 shared
[2025-11-27 10:14:47] -rw-r--r-- 2 boinc boinc    590106 Nov 27 04:35 input.tar.gz
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:35 boinc_lockfile
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc      2785 Nov 27 04:35 pandaJob.out
[2025-11-27 10:14:47] -rw------- 1 boinc boinc    991572 Nov 27 04:36 agis_schedconf.cvmfs.json
[2025-11-27 10:14:47] drwx------ 5 boinc boinc      4096 Nov 27 04:36 pilot3
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc       532 Nov 27 10:09 boinc_task_state.xml
[2025-11-27 10:14:47] -rw------- 1 boinc boinc 924665120 Nov 27 10:13 HITS.47556173._001358.pool.root.1
[2025-11-27 10:14:47] -rw------- 1 boinc boinc      1036 Nov 27 10:13 memory_monitor_summary.json
[2025-11-27 10:14:47] -rw------- 1 boinc boinc        95 Nov 27 10:13 pilot_heartbeat.json
[2025-11-27 10:14:47] -rw------- 1 boinc boinc   1516240 Nov 27 10:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:14:47] -rw------- 1 boinc boinc   1639930 Nov 27 10:13 log.47556173._001358.job.log.tgz.1
[2025-11-27 10:14:47] -rw------- 1 boinc boinc      8592 Nov 27 10:13 heartbeat.json
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc      8192 Nov 27 10:14 boinc_mmap_file
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc        29 Nov 27 10:14 wrapper_checkpoint.txt
[2025-11-27 10:14:47] -rw------- 1 boinc boinc      4830 Nov 27 10:14 pilotlog.txt
[2025-11-27 10:14:47] -rw------- 1 boinc boinc   2913778 Nov 27 10:14 log.47556173._001358.job.log.1
[2025-11-27 10:14:47] -rw------- 1 boinc boinc       353 Nov 27 10:14 output.list
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc       620 Nov 27 10:14 runtime_log
[2025-11-27 10:14:47] -rw------- 1 boinc boinc   4577280 Nov 27 10:14 result.tar.gz
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc      8968 Nov 27 10:14 runtime_log.err
[2025-11-27 10:14:47] -rw------- 1 boinc boinc       663 Nov 27 10:14 p1DODmtJMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYwJKDmaO5gLm.diag
[2025-11-27 10:14:47] -rw-r--r-- 1 boinc boinc     21450 Nov 27 10:14 stderr.txt
[2025-11-27 10:14:47] HITS file was successfully produced:
[2025-11-27 10:14:47] -rw------- 1 boinc boinc 924665120 Nov 27 10:13 shared/HITS.pool.root.1
[2025-11-27 10:14:47]  *** Contents of shared directory: ***
[2025-11-27 10:14:47] total 1307404
[2025-11-27 10:14:47] -rw-r--r-- 2 boinc boinc 408914674 Nov 27 04:35 ATLAS.root_0
[2025-11-27 10:14:47] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:35 start_atlas.sh
[2025-11-27 10:14:47] -rw-r--r-- 2 boinc boinc    590106 Nov 27 04:35 input.tar.gz
[2025-11-27 10:14:47] -rw------- 1 boinc boinc 924665120 Nov 27 10:13 HITS.pool.root.1
[2025-11-27 10:14:47] -rw------- 1 boinc boinc   4577280 Nov 27 10:14 result.tar.gz
10:14:48 (261505): run_atlas exited; CPU time 152934.528524
10:14:48 (261505): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN