Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:35:14 (7811): wrapper (7.7.26015): starting
01:35:14 (7811): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:35:14] Arguments: --nthreads 8
[2025-11-27 01:35:14] Threads: 8
[2025-11-27 01:35:14] Checking for CVMFS
[2025-11-27 01:35:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:35:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:35:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:35:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:35:15] 2.11.2.0 2795 48504 88912 153350 1 81 19743389 20275200 1 130560 0 7561248 99.677 3098443 28794 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:35:15] CVMFS is ok
[2025-11-27 01:35:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:35:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:35:15] Further information can be found at the LHC@home message board.
[2025-11-27 01:35:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:35:15] Checking for apptainer binary...
[2025-11-27 01:35:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:35:15] Running /usr/bin/apptainer --version
[2025-11-27 01:35:15] apptainer version 1.3.2-1.el7
[2025-11-27 01:35:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:35:16] c-204-18.aglt2.org
[2025-11-27 01:35:16] apptainer works
[2025-11-27 01:35:16] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:35:16] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:35:16] Starting ATLAS job with PandaID=6897488874
[2025-11-27 01:35:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:59:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:59:55] 2025-11-27 18:59:12,788 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:59:55] 2025-11-27 18:59:12,833 | INFO     | time since job start (44618s) is within the limit (172800.0s)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,269 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 13:59:55] 2025-11-27 18:59:13,273 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-27 13:59:55] 2025-11-27 18:59:13,275 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897488874/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,276 | INFO     | extracted standard info from prmon json
[2025-11-27 13:59:55] 2025-11-27 18:59:13,276 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:59:55] 2025-11-27 18:59:13,277 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:59:55] 2025-11-27 18:59:13,290 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:59:55] 2025-11-27 18:59:13,291 | INFO     | sum of square deviations: 121123665743.54578
[2025-11-27 13:59:55] 2025-11-27 18:59:13,302 | INFO     | sum of deviations: 785580071451.7688
[2025-11-27 13:59:55] 2025-11-27 18:59:13,302 | INFO     | mean x: 1764247632.6703146
[2025-11-27 13:59:55] 2025-11-27 18:59:13,302 | INFO     | mean y: 3187670.9616963062
[2025-11-27 13:59:55] 2025-11-27 18:59:13,302 | INFO     | intersect: -11439314277.965754
[2025-11-27 13:59:55] 2025-11-27 18:59:13,303 | INFO     | chi2: 5.791421571492013
[2025-11-27 13:59:55] 2025-11-27 18:59:13,304 | INFO     | sum of square deviations: 118655331698.78375
[2025-11-27 13:59:55] 2025-11-27 18:59:13,314 | INFO     | sum of deviations: 1036597295727.8761
[2025-11-27 13:59:55] 2025-11-27 18:59:13,315 | INFO     | mean x: 1764247480.174931
[2025-11-27 13:59:55] 2025-11-27 18:59:13,315 | INFO     | mean y: 3203173.0482093664
[2025-11-27 13:59:55] 2025-11-27 18:59:13,315 | INFO     | intersect: -15409624390.290009
[2025-11-27 13:59:55] 2025-11-27 18:59:13,316 | INFO     | chi2: 3.047174550973321
[2025-11-27 13:59:55] 2025-11-27 18:59:13,316 | INFO     | current chi2=3.047174550973321 (change=47.38468762189776 %)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,317 | INFO     | sum of square deviations: 116220765728.99004
[2025-11-27 13:59:55] 2025-11-27 18:59:13,328 | INFO     | sum of deviations: 1137980803122.5156
[2025-11-27 13:59:55] 2025-11-27 18:59:13,328 | INFO     | mean x: 1764247327.6796117
[2025-11-27 13:59:55] 2025-11-27 18:59:13,328 | INFO     | mean y: 3209510.8377253814
[2025-11-27 13:59:55] 2025-11-27 18:59:13,328 | INFO     | intersect: -17271496762.748646
[2025-11-27 13:59:55] 2025-11-27 18:59:13,329 | INFO     | chi2: 2.4006855886582565
[2025-11-27 13:59:55] 2025-11-27 18:59:13,329 | INFO     | current chi2=2.4006855886582565 (change=21.216013441322694 %)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,329 | INFO     | right removable region: 720
[2025-11-27 13:59:55] 2025-11-27 18:59:13,330 | INFO     | sum of square deviations: 118655032798.78387
[2025-11-27 13:59:55] 2025-11-27 18:59:13,340 | INFO     | sum of deviations: 563239073612.4242
[2025-11-27 13:59:55] 2025-11-27 18:59:13,340 | INFO     | mean x: 1764247785.174931
[2025-11-27 13:59:55] 2025-11-27 18:59:13,341 | INFO     | mean y: 3201384.484848485
[2025-11-27 13:59:55] 2025-11-27 18:59:13,341 | INFO     | intersect: -8371439494.253201
[2025-11-27 13:59:55] 2025-11-27 18:59:13,342 | INFO     | chi2: 3.552508155265371
[2025-11-27 13:59:55] 2025-11-27 18:59:13,342 | INFO     | current chi2=3.552508155265371 (change=38.659133834214096 %)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,342 | INFO     | sum of square deviations: 116220211971.34807
[2025-11-27 13:59:55] 2025-11-27 18:59:13,353 | INFO     | sum of deviations: 520611703104.1404
[2025-11-27 13:59:55] 2025-11-27 18:59:13,353 | INFO     | mean x: 1764247937.6782248
[2025-11-27 13:59:55] 2025-11-27 18:59:13,353 | INFO     | mean y: 3204052.7031900138
[2025-11-27 13:59:55] 2025-11-27 18:59:13,353 | INFO     | intersect: -7899794125.953239
[2025-11-27 13:59:55] 2025-11-27 18:59:13,354 | INFO     | chi2: 3.5167175945324676
[2025-11-27 13:59:55] 2025-11-27 18:59:13,354 | INFO     | current chi2=3.5167175945324676 (change=1.0074730069192386 %)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,354 | INFO     | left removable region: 20
[2025-11-27 13:59:55] 2025-11-27 18:59:13,355 | INFO     | sum of square deviations: 106358282550.48424
[2025-11-27 13:59:55] 2025-11-27 18:59:13,365 | INFO     | sum of deviations: 831343091979.6246
[2025-11-27 13:59:55] 2025-11-27 18:59:13,365 | INFO     | mean x: 1764247907.1871428
[2025-11-27 13:59:55] 2025-11-27 18:59:13,366 | INFO     | mean y: 3230006.247142857
[2025-11-27 13:59:55] 2025-11-27 18:59:13,366 | INFO     | intersect: -13786907207.404804
[2025-11-27 13:59:55] 2025-11-27 18:59:13,366 | INFO     | chi2: 0.07852793554117836
[2025-11-27 13:59:55] 2025-11-27 18:59:13,367 | INFO     | current memory leak: 7.82 B/s (using 700 data points, chi2=0.08)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,367 | INFO     | could have reported an average CPU frequency of 2172 MHz (28 samples)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,367 | INFO     | ..............................
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . Timing measurements:
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . get job = 0 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . initial setup = 2 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . payload setup = 9 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . stage-in = 0 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . payload execution = 44575 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . stage-out = 3 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | . log creation = 0 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,368 | INFO     | ..............................
[2025-11-27 13:59:55] 2025-11-27 18:59:13,464 | INFO     | 
[2025-11-27 13:59:55] 2025-11-27 18:59:13,464 | INFO     | job summary report
[2025-11-27 13:59:55] 2025-11-27 18:59:13,464 | INFO     | --------------------------------------------------
[2025-11-27 13:59:55] 2025-11-27 18:59:13,464 | INFO     | PanDA job id: 6897488874
[2025-11-27 13:59:55] 2025-11-27 18:59:13,465 | INFO     | task id: 47556161
[2025-11-27 13:59:55] 2025-11-27 18:59:13,465 | INFO     | errors: (none)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,465 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:59:55] 2025-11-27 18:59:13,465 | INFO     | pilot state: finished 
[2025-11-27 13:59:55] 2025-11-27 18:59:13,465 | INFO     | transexitcode: 0
[2025-11-27 13:59:55] 2025-11-27 18:59:13,465 | INFO     | exeerrorcode: 0
[2025-11-27 13:59:55] 2025-11-27 18:59:13,466 | INFO     | exeerrordiag: 
[2025-11-27 13:59:55] 2025-11-27 18:59:13,466 | INFO     | exitcode: 0
[2025-11-27 13:59:55] 2025-11-27 18:59:13,466 | INFO     | exitmsg: OK
[2025-11-27 13:59:55] 2025-11-27 18:59:13,466 | INFO     | cpuconsumptiontime: 345815 s
[2025-11-27 13:59:55] 2025-11-27 18:59:13,466 | INFO     | nevents: 1000
[2025-11-27 13:59:55] 2025-11-27 18:59:13,466 | INFO     | neventsw: 0
[2025-11-27 13:59:55] 2025-11-27 18:59:13,467 | INFO     | pid: 17946
[2025-11-27 13:59:55] 2025-11-27 18:59:13,467 | INFO     | pgrp: 17946
[2025-11-27 13:59:55] 2025-11-27 18:59:13,467 | INFO     | corecount: 8
[2025-11-27 13:59:55] 2025-11-27 18:59:13,467 | INFO     | event service: False
[2025-11-27 13:59:55] 2025-11-27 18:59:13,467 | INFO     | sizes: {0: 2284094, 1: 2284293, 7: 2284555, 11: 2284583, 44588: 2330341, 44593: 2339335, 44595: 2339519, 44602: 2339765}
[2025-11-27 13:59:55] 2025-11-27 18:59:13,468 | INFO     | --------------------------------------------------
[2025-11-27 13:59:55] 2025-11-27 18:59:13,468 | INFO     | 
[2025-11-27 13:59:55] 2025-11-27 18:59:13,468 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 13:59:55] 2025-11-27 18:59:13,496 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,497 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,497 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,497 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,497 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,500 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,500 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,500 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:59:55] 2025-11-27 18:59:13,501 | INFO     | job 6897488874 has completed (purged errors)
[2025-11-27 13:59:55] 2025-11-27 18:59:13,501 | INFO     | overall cleanup function is called
[2025-11-27 13:59:55] 2025-11-27 18:59:14,517 | INFO     | --- collectZombieJob: --- 10, [17946]
[2025-11-27 13:59:55] 2025-11-27 18:59:14,518 | INFO     | zombie collector waiting for pid 17946
[2025-11-27 13:59:55] 2025-11-27 18:59:14,518 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:59:55] 2025-11-27 18:59:14,519 | INFO     | collected zombie processes
[2025-11-27 13:59:55] 2025-11-27 18:59:14,519 | INFO     | will attempt to kill all subprocesses of pid=17946
[2025-11-27 13:59:55] 2025-11-27 18:59:14,613 | INFO     | process IDs to be killed: [17946] (in reverse order)
[2025-11-27 13:59:55] 2025-11-27 18:59:14,676 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:59:55] 2025-11-27 18:59:14,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:59:55] 2025-11-27 18:59:14,682 | INFO     | did not find any defunct processes belonging to 17946
[2025-11-27 13:59:55] 2025-11-27 18:59:14,685 | INFO     | did not find any defunct processes belonging to 17946
[2025-11-27 13:59:55] 2025-11-27 18:59:14,688 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:59:55] 2025-11-27 18:59:14,689 | INFO     | ready for new job
[2025-11-27 13:59:55] 2025-11-27 18:59:14,689 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:59:55] 2025-11-27 18:59:14,693 | INFO     | ***************************************
[2025-11-27 13:59:55] 2025-11-27 18:59:14,693 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:59:55] 2025-11-27 18:59:14,694 | INFO     | ***************************************
[2025-11-27 13:59:55] 2025-11-27 18:59:14,694 | INFO     | 
[2025-11-27 13:59:55] 2025-11-27 18:59:14,694 | INFO     | architecture information:
[2025-11-27 13:59:55] 2025-11-27 18:59:14,695 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:59:55] 2025-11-27 18:59:14,713 | INFO     | cat /etc/os-release:
[2025-11-27 13:59:55] NAME="CentOS Linux"
[2025-11-27 13:59:55] VERSION="7 (Core)"
[2025-11-27 13:59:55] ID="centos"
[2025-11-27 13:59:55] ID_LIKE="rhel fedora"
[2025-11-27 13:59:55] VERSION_ID="7"
[2025-11-27 13:59:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:59:55] ANSI_COLOR="0;31"
[2025-11-27 13:59:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:59:55] HOME_URL="https://www.centos.org/"
[2025-11-27 13:59:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:59:55] 
[2025-11-27 13:59:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:59:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:59:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:59:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:59:55] 
[2025-11-27 13:59:55] 2025-11-27 18:59:14,713 | INFO     | ***************************************
[2025-11-27 13:59:55] 2025-11-27 18:59:15,217 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 13:59:55] 2025-11-27 18:59:15,238 | INFO     | sufficient remaining disk space (17447256064 B)
[2025-11-27 13:59:55] 2025-11-27 18:59:15,238 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:59:55] 2025-11-27 18:59:15,238 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:59:55] 2025-11-27 18:59:15,239 | INFO     | update_server=False
[2025-11-27 13:59:55] 2025-11-27 18:59:15,239 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:59:55] 2025-11-27 18:59:15,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:59:55] 2025-11-27 18:59:15,240 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:59:55] 2025-11-27 18:59:15,291 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 13:59:55] 2025-11-27 18:59:15,292 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 13:59:55] 2025-11-27 18:59:15,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:59:55] 2025-11-27 18:59:15,292 | INFO     | will abort loop
[2025-11-27 13:59:55] 2025-11-27 18:59:15,537 | INFO     | all payload control threads have been joined
[2025-11-27 13:59:55] 2025-11-27 18:59:16,016 | INFO     | all job control threads have been joined
[2025-11-27 13:59:55] 2025-11-27 18:59:16,245 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,246 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,298 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,317 | INFO     | all data control threads have been joined
[2025-11-27 13:59:55] 2025-11-27 18:59:16,454 | INFO     | [job] validate thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,542 | INFO     | [payload] control thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,568 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,665 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,705 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,781 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:16,958 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:17,022 | INFO     | [job] control thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:17,119 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:17,246 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:17,323 | INFO     | [data] control thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:17,529 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:17,869 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:59:55] 2025-11-27 18:59:21,875 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:59:55] 2025-11-27 18:59:46,030 | INFO     | PID=11501 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 13:59:55] 2025-11-27 18:59:46,032 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:59:55] 2025-11-27 18:59:46,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:59:55] 2025-11-27 18:59:46,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:59:55] 2025-11-27 18:59:48,386 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:59:55] 2025-11-27 18:59:49,998 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139890241378112)>', '<ExcThread(monitor, started 139889265850112)>']
[2025-11-27 13:59:55] 2025-11-27 18:59:50,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:59:55] 2025-11-27 18:59:50,048 | INFO     | [monitor] control thread has ended
[2025-11-27 13:59:55] 2025-11-27 18:59:55,000 | INFO     | all workflow threads have been joined
[2025-11-27 13:59:55] 2025-11-27 18:59:55,000 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:59:55] 2025-11-27 18:59:55,001 | INFO     | traces error code: 0
[2025-11-27 13:59:55] 2025-11-27 18:59:55,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:59:55] 2025-11-27 18:59:55,120 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:59:55] 2025-11-27 18:59:55,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:59:55] 2025-11-27 18:59:55,130 [wrapper] pilotpid: 11501
[2025-11-27 13:59:55] 2025-11-27 18:59:55,135 [wrapper] Pilot exit status: 0
[2025-11-27 13:59:55] 2025-11-27 18:59:55,153 [wrapper] pandaids: 6897488874
[2025-11-27 13:59:55] 2025-11-27 18:59:55,204 [wrapper] cleanup supervisor_pilot 19219 11502
[2025-11-27 13:59:55] 2025-11-27 18:59:55,210 [wrapper] Test setup, not cleaning
[2025-11-27 13:59:55] 2025-11-27 18:59:55,215 [wrapper] apfmon messages muted
[2025-11-27 13:59:55] 2025-11-27 18:59:55,220 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:59:55] 2025-11-27 18:59:55,225 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:59:55]  *** Error codes and diagnostics ***
[2025-11-27 13:59:55]     "exeErrorCode": 0,
[2025-11-27 13:59:55]     "exeErrorDiag": "",
[2025-11-27 13:59:55]     "pilotErrorCode": 0,
[2025-11-27 13:59:55]     "pilotErrorDiag": "",
[2025-11-27 13:59:55]  *** Listing of results directory ***
[2025-11-27 13:59:55] total 1308092
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 13:59:55] -rwx------ 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas       100 Nov 27 01:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:59:55] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 01:35 run_atlas
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas       105 Nov 27 01:35 job.xml
[2025-11-27 13:59:55] -rw-r--r-- 2 boincer umatlas 407606594 Nov 27 01:35 EVNT.47483658._002268.pool.root.1
[2025-11-27 13:59:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:35 start_atlas.sh
[2025-11-27 13:59:55] drwxrwx--x 2 boincer umatlas      4096 Nov 27 01:35 shared
[2025-11-27 13:59:55] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 01:35 input.tar.gz
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas         0 Nov 27 01:35 boinc_lockfile
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas      2786 Nov 27 01:35 pandaJob.out
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas        57 Nov 27 01:35 setup.sh.local
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas    991554 Nov 27 01:35 agis_schedconf.cvmfs.json
[2025-11-27 13:59:55] drwx------ 5 boincer umatlas      4096 Nov 27 01:35 pilot3
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas       533 Nov 27 13:47 boinc_task_state.xml
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas      5912 Nov 27 13:56 init_data.xml
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas 911737745 Nov 27 13:58 HITS.47556161._002517.pool.root.1
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas      1061 Nov 27 13:58 memory_monitor_summary.json
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas   1516240 Nov 27 13:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas   1977271 Nov 27 13:59 log.47556161._002517.job.log.tgz.1
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas      8657 Nov 27 13:59 heartbeat.json
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas        29 Nov 27 13:59 wrapper_checkpoint.txt
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 13:59 boinc_mmap_file
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas        95 Nov 27 13:59 pilot_heartbeat.json
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas      4932 Nov 27 13:59 pilotlog.txt
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas   6134751 Nov 27 13:59 log.47556161._002517.job.log.1
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas       353 Nov 27 13:59 output.list
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas       620 Nov 27 13:59 runtime_log
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas   8130560 Nov 27 13:59 result.tar.gz
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas       668 Nov 27 13:59 WxfLDmtaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVZMKDmNc9nUn.diag
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 13:59 runtime_log.err
[2025-11-27 13:59:55] -rw-r--r-- 1 boincer umatlas     21308 Nov 27 13:59 stderr.txt
[2025-11-27 13:59:55] HITS file was successfully produced:
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas 911737745 Nov 27 13:58 shared/HITS.pool.root.1
[2025-11-27 13:59:55]  *** Contents of shared directory: ***
[2025-11-27 13:59:55] total 1296968
[2025-11-27 13:59:55] -rw-r--r-- 2 boincer umatlas 407606594 Nov 27 01:35 ATLAS.root_0
[2025-11-27 13:59:55] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:35 start_atlas.sh
[2025-11-27 13:59:55] -rw-r--r-- 2 boincer umatlas    590110 Nov 27 01:35 input.tar.gz
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas 911737745 Nov 27 13:58 HITS.pool.root.1
[2025-11-27 13:59:55] -rw------- 1 boincer umatlas   8130560 Nov 27 13:59 result.tar.gz
13:59:57 (7811): run_atlas exited; CPU time 343495.620051
13:59:57 (7811): called boinc_finish(0)

</stderr_txt>
]]>

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