Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:42:56 (16924): wrapper (7.7.26015): starting
00:42:56 (16924): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:42:56] Arguments: --nthreads 8
[2025-11-27 00:42:56] Threads: 8
[2025-11-27 00:42:56] Checking for CVMFS
[2025-11-27 00:42:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:42:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:42:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:42:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:42:56] 2.11.2.0 1598 282037 115388 153349 0 82 19907660 20275201 943 130560 1 265436527 99.981 15745344 13276 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:42:56] CVMFS is ok
[2025-11-27 00:42:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:42:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:42:56] Further information can be found at the LHC@home message board.
[2025-11-27 00:42:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:42:56] Checking for apptainer binary...
[2025-11-27 00:42:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:42:56] Running /usr/bin/apptainer --version
[2025-11-27 00:42:56] apptainer version 1.3.2-1.el7
[2025-11-27 00:42:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:42:57] c-205-36.aglt2.org
[2025-11-27 00:42:57] apptainer works
[2025-11-27 00:42:57] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:42:57] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:42:57] Starting ATLAS job with PandaID=6898214303
[2025-11-27 00:42:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:03:52]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:03:52] 2025-11-27 12:02:59,536 | INFO     | time since job start (22790s) is within the limit (172800.0s)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,591 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 07:03:52] 2025-11-27 12:02:59,595 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1992.7730625000004
[2025-11-27 07:03:52] 2025-11-27 12:02:59,599 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898214303/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,600 | INFO     | extracted standard info from prmon json
[2025-11-27 07:03:52] 2025-11-27 12:02:59,600 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:03:52] 2025-11-27 12:02:59,600 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:03:52] 2025-11-27 12:02:59,607 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:03:52] 2025-11-27 12:02:59,608 | INFO     | sum of square deviations: 16221652217.828896
[2025-11-27 07:03:52] 2025-11-27 12:02:59,612 | INFO     | sum of deviations: 165056725128.95715
[2025-11-27 07:03:52] 2025-11-27 12:02:59,612 | INFO     | mean x: 1764233590.566845
[2025-11-27 07:03:52] 2025-11-27 12:02:59,612 | INFO     | mean y: 3262839.64171123
[2025-11-27 07:03:52] 2025-11-27 12:02:59,612 | INFO     | intersect: -17947967707.725975
[2025-11-27 07:03:52] 2025-11-27 12:02:59,613 | INFO     | chi2: 4.356456868656039
[2025-11-27 07:03:52] 2025-11-27 12:02:59,613 | INFO     | sum of square deviations: 15579722225.306267
[2025-11-27 07:03:52] 2025-11-27 12:02:59,617 | INFO     | sum of deviations: 285662155089.65857
[2025-11-27 07:03:52] 2025-11-27 12:02:59,617 | INFO     | mean x: 1764233438.0677507
[2025-11-27 07:03:52] 2025-11-27 12:02:59,617 | INFO     | mean y: 3291411.8536585364
[2025-11-27 07:03:52] 2025-11-27 12:02:59,617 | INFO     | intersect: -32344828709.380672
[2025-11-27 07:03:52] 2025-11-27 12:02:59,618 | INFO     | chi2: 1.7904985664997148
[2025-11-27 07:03:52] 2025-11-27 12:02:59,618 | INFO     | current chi2=1.7904985664997148 (change=58.9001195126699 %)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,618 | INFO     | sum of square deviations: 14954955345.283007
[2025-11-27 07:03:52] 2025-11-27 12:02:59,622 | INFO     | sum of deviations: 280689430383.0196
[2025-11-27 07:03:52] 2025-11-27 12:02:59,622 | INFO     | mean x: 1764233285.5686812
[2025-11-27 07:03:52] 2025-11-27 12:02:59,622 | INFO     | mean y: 3290191.019230769
[2025-11-27 07:03:52] 2025-11-27 12:02:59,622 | INFO     | intersect: -33109589423.511314
[2025-11-27 07:03:52] 2025-11-27 12:02:59,623 | INFO     | chi2: 1.784030696318613
[2025-11-27 07:03:52] 2025-11-27 12:02:59,623 | INFO     | current chi2=1.784030696318613 (change=0.3612329159104564 %)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,623 | INFO     | right removable region: 363
[2025-11-27 07:03:52] 2025-11-27 12:02:59,623 | INFO     | sum of square deviations: 15579706975.306265
[2025-11-27 07:03:52] 2025-11-27 12:02:59,627 | INFO     | sum of deviations: 72610289635.01086
[2025-11-27 07:03:52] 2025-11-27 12:02:59,627 | INFO     | mean x: 1764233743.0677507
[2025-11-27 07:03:52] 2025-11-27 12:02:59,627 | INFO     | mean y: 3284694.6395663954
[2025-11-27 07:03:52] 2025-11-27 12:02:59,627 | INFO     | intersect: -8219047296.010118
[2025-11-27 07:03:52] 2025-11-27 12:02:59,628 | INFO     | chi2: 2.63789194472682
[2025-11-27 07:03:52] 2025-11-27 12:02:59,628 | INFO     | current chi2=2.63789194472682 (change=39.448684464065266 %)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,628 | INFO     | sum of square deviations: 14954924845.283007
[2025-11-27 07:03:52] 2025-11-27 12:02:59,631 | INFO     | sum of deviations: 59845036866.843445
[2025-11-27 07:03:52] 2025-11-27 12:02:59,631 | INFO     | mean x: 1764233895.5686812
[2025-11-27 07:03:52] 2025-11-27 12:02:59,632 | INFO     | mean y: 3287803.986263736
[2025-11-27 07:03:52] 2025-11-27 12:02:59,632 | INFO     | intersect: -7056636843.869401
[2025-11-27 07:03:52] 2025-11-27 12:02:59,632 | INFO     | chi2: 2.6279804911328797
[2025-11-27 07:03:52] 2025-11-27 12:02:59,632 | INFO     | current chi2=2.6279804911328797 (change=0.37573387392738106 %)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,632 | INFO     | left removable region: 20
[2025-11-27 07:03:52] 2025-11-27 12:02:59,633 | INFO     | sum of square deviations: 12513046167.177788
[2025-11-27 07:03:52] 2025-11-27 12:02:59,636 | INFO     | sum of deviations: 158530842044.5305
[2025-11-27 07:03:52] 2025-11-27 12:02:59,636 | INFO     | mean x: 1764233865.0728862
[2025-11-27 07:03:52] 2025-11-27 12:02:59,636 | INFO     | mean y: 3320503.93877551
[2025-11-27 07:03:52] 2025-11-27 12:02:59,636 | INFO     | intersect: -22348189788.343792
[2025-11-27 07:03:52] 2025-11-27 12:02:59,636 | INFO     | chi2: 0.020790053249891003
[2025-11-27 07:03:52] 2025-11-27 12:02:59,636 | INFO     | current memory leak: 12.67 B/s (using 343 data points, chi2=0.02)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | could have reported an average CPU frequency of 2450 MHz (16 samples)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | ..............................
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | . Timing measurements:
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | . get job = 0 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | . initial setup = 2 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | . payload setup = 5 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,637 | INFO     | . stage-in = 0 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,638 | INFO     | . payload execution = 22757 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,638 | INFO     | . stage-out = 2 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,638 | INFO     | . log creation = 0 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,638 | INFO     | ..............................
[2025-11-27 07:03:52] 2025-11-27 12:02:59,704 | INFO     | 
[2025-11-27 07:03:52] 2025-11-27 12:02:59,704 | INFO     | job summary report
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | --------------------------------------------------
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | PanDA job id: 6898214303
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | task id: 47556161
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | errors: (none)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | pilot state: finished 
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | transexitcode: 0
[2025-11-27 07:03:52] 2025-11-27 12:02:59,705 | INFO     | exeerrorcode: 0
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | exeerrordiag: 
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | exitcode: 0
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | exitmsg: OK
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | cpuconsumptiontime: 177570 s
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | nevents: 1000
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | neventsw: 0
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | pid: 27006
[2025-11-27 07:03:52] 2025-11-27 12:02:59,706 | INFO     | pgrp: 27006
[2025-11-27 07:03:52] 2025-11-27 12:02:59,707 | INFO     | corecount: 8
[2025-11-27 07:03:52] 2025-11-27 12:02:59,707 | INFO     | event service: False
[2025-11-27 07:03:52] 2025-11-27 12:02:59,707 | INFO     | sizes: {0: 2284093, 1: 2284292, 5: 2284554, 11: 2284610, 22766: 2320198, 22770: 2329376, 22776: 2329566}
[2025-11-27 07:03:52] 2025-11-27 12:02:59,707 | INFO     | --------------------------------------------------
[2025-11-27 07:03:52] 2025-11-27 12:02:59,707 | INFO     | 
[2025-11-27 07:03:52] 2025-11-27 12:02:59,707 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 07:03:52] 2025-11-27 12:02:59,725 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,725 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,726 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,728 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:03:52] 2025-11-27 12:02:59,728 | INFO     | job 6898214303 has completed (purged errors)
[2025-11-27 07:03:52] 2025-11-27 12:02:59,728 | INFO     | overall cleanup function is called
[2025-11-27 07:03:52] 2025-11-27 12:03:00,679 | INFO     | PID=20647 has CPU usage=11.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 07:03:52] 2025-11-27 12:03:00,679 | INFO     | .. there are 2 such processes running
[2025-11-27 07:03:52] 2025-11-27 12:03:00,743 | INFO     | --- collectZombieJob: --- 10, [27006]
[2025-11-27 07:03:52] 2025-11-27 12:03:00,744 | INFO     | zombie collector waiting for pid 27006
[2025-11-27 07:03:52] 2025-11-27 12:03:00,744 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:03:52] 2025-11-27 12:03:00,744 | INFO     | collected zombie processes
[2025-11-27 07:03:52] 2025-11-27 12:03:00,744 | INFO     | will attempt to kill all subprocesses of pid=27006
[2025-11-27 07:03:52] 2025-11-27 12:03:00,861 | INFO     | process IDs to be killed: [27006] (in reverse order)
[2025-11-27 07:03:52] 2025-11-27 12:03:00,906 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:03:52] 2025-11-27 12:03:00,907 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:03:52] 2025-11-27 12:03:00,910 | INFO     | did not find any defunct processes belonging to 27006
[2025-11-27 07:03:52] 2025-11-27 12:03:00,914 | INFO     | did not find any defunct processes belonging to 27006
[2025-11-27 07:03:52] 2025-11-27 12:03:00,916 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:03:52] 2025-11-27 12:03:00,916 | INFO     | ready for new job
[2025-11-27 07:03:52] 2025-11-27 12:03:00,916 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:03:52] 2025-11-27 12:03:00,919 | INFO     | ***************************************
[2025-11-27 07:03:52] 2025-11-27 12:03:00,919 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:03:52] 2025-11-27 12:03:00,919 | INFO     | ***************************************
[2025-11-27 07:03:52] 2025-11-27 12:03:00,919 | INFO     | 
[2025-11-27 07:03:52] 2025-11-27 12:03:00,920 | INFO     | architecture information:
[2025-11-27 07:03:52] 2025-11-27 12:03:00,921 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:03:52] 2025-11-27 12:03:00,935 | INFO     | cat /etc/os-release:
[2025-11-27 07:03:52] NAME="CentOS Linux"
[2025-11-27 07:03:52] VERSION="7 (Core)"
[2025-11-27 07:03:52] ID="centos"
[2025-11-27 07:03:52] ID_LIKE="rhel fedora"
[2025-11-27 07:03:52] VERSION_ID="7"
[2025-11-27 07:03:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:03:52] ANSI_COLOR="0;31"
[2025-11-27 07:03:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:03:52] HOME_URL="https://www.centos.org/"
[2025-11-27 07:03:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:03:52] 
[2025-11-27 07:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:03:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:03:52] 
[2025-11-27 07:03:52] 2025-11-27 12:03:00,936 | INFO     | ***************************************
[2025-11-27 07:03:52] 2025-11-27 12:03:01,436 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 07:03:52] 2025-11-27 12:03:01,453 | INFO     | sufficient remaining disk space (31187795968 B)
[2025-11-27 07:03:52] 2025-11-27 12:03:01,453 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:03:52] 2025-11-27 12:03:01,454 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:03:52] 2025-11-27 12:03:01,454 | INFO     | update_server=False
[2025-11-27 07:03:52] 2025-11-27 12:03:01,454 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:03:52] 2025-11-27 12:03:01,454 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:03:52] 2025-11-27 12:03:01,455 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:03:52] 2025-11-27 12:03:01,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:03:52] 2025-11-27 12:03:01,455 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 07:03:52] 2025-11-27 12:03:01,456 | INFO     | aborting loop
[2025-11-27 07:03:52] 2025-11-27 12:03:01,456 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:03:52] 2025-11-27 12:03:01,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:03:52] 2025-11-27 12:03:01,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:03:52] 2025-11-27 12:03:01,634 | INFO     | all job control threads have been joined
[2025-11-27 07:03:52] 2025-11-27 12:03:01,677 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:03:52] 2025-11-27 12:03:02,103 | INFO     | all payload control threads have been joined
[2025-11-27 07:03:52] 2025-11-27 12:03:02,455 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:02,460 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:02,461 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:02,489 | INFO     | all data control threads have been joined
[2025-11-27 07:03:52] 2025-11-27 12:03:02,640 | INFO     | [job] control thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:02,878 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:02,932 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,108 | INFO     | [payload] control thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,331 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,398 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,399 | INFO     | [job] validate thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,405 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,494 | INFO     | [data] control thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,601 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:03,682 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:05,460 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:11,823 | INFO     | job.realtimelogging is not enabled
[2025-11-27 07:03:52] 2025-11-27 12:03:12,828 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:03:52] 2025-11-27 12:03:46,438 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:03:52] 2025-11-27 12:03:47,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163440248640)>', '<ExcThread(monitor, started 140163019691776)>']
[2025-11-27 07:03:52] 2025-11-27 12:03:47,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:03:52] 2025-11-27 12:03:47,668 | INFO     | [monitor] control thread has ended
[2025-11-27 07:03:52] 2025-11-27 12:03:52,667 | INFO     | all workflow threads have been joined
[2025-11-27 07:03:52] 2025-11-27 12:03:52,667 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:03:52] 2025-11-27 12:03:52,668 | INFO     | traces error code: 0
[2025-11-27 07:03:52] 2025-11-27 12:03:52,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:03:52] 2025-11-27 12:03:52,765 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:03:52] 2025-11-27 12:03:52,768 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:03:52] 2025-11-27 12:03:52,771 [wrapper] pilotpid: 20647
[2025-11-27 07:03:52] 2025-11-27 12:03:52,775 [wrapper] Pilot exit status: 0
[2025-11-27 07:03:52] 2025-11-27 12:03:52,785 [wrapper] pandaids: 6898214303
[2025-11-27 07:03:52] 2025-11-27 12:03:52,829 [wrapper] cleanup supervisor_pilot  1923 20648
[2025-11-27 07:03:52] 2025-11-27 12:03:52,832 [wrapper] Test setup, not cleaning
[2025-11-27 07:03:52] 2025-11-27 12:03:52,835 [wrapper] apfmon messages muted
[2025-11-27 07:03:52] 2025-11-27 12:03:52,839 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:03:52] 2025-11-27 12:03:52,843 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:03:52]  *** Error codes and diagnostics ***
[2025-11-27 07:03:52]     "exeErrorCode": 0,
[2025-11-27 07:03:52]     "exeErrorDiag": "",
[2025-11-27 07:03:52]     "pilotErrorCode": 0,
[2025-11-27 07:03:52]     "pilotErrorDiag": "",
[2025-11-27 07:03:52]  *** Listing of results directory ***
[2025-11-27 07:03:52] total 1308628
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 07:03:52] -rwx------ 1 boincer umatlas     36292 Nov 25 23:28 runpilot2-wrapper.sh
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:28 queuedata.json
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas       100 Nov 27 00:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:03:52] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 00:42 run_atlas
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas       105 Nov 27 00:42 job.xml
[2025-11-27 07:03:52] -rw-r--r-- 2 boincer umatlas 410844293 Nov 27 00:42 EVNT.47483658._002493.pool.root.1
[2025-11-27 07:03:52] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 00:42 start_atlas.sh
[2025-11-27 07:03:52] drwxrwx--x 2 boincer umatlas      4096 Nov 27 00:42 shared
[2025-11-27 07:03:52] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 00:42 input.tar.gz
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas         0 Nov 27 00:42 boinc_lockfile
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 00:42 pandaJob.out
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas        57 Nov 27 00:42 setup.sh.local
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas    991578 Nov 27 00:43 agis_schedconf.cvmfs.json
[2025-11-27 07:03:52] drwx------ 5 boincer umatlas      4096 Nov 27 00:43 pilot3
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas      6137 Nov 27 06:57 init_data.xml
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas       533 Nov 27 06:58 boinc_task_state.xml
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas        95 Nov 27 07:02 pilot_heartbeat.json
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas 915414869 Nov 27 07:02 HITS.47556161._004754.pool.root.1
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas      1060 Nov 27 07:02 memory_monitor_summary.json
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas   1516240 Nov 27 07:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas   1691116 Nov 27 07:02 log.47556161._004754.job.log.tgz.1
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas      8656 Nov 27 07:02 heartbeat.json
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas        29 Nov 27 07:03 wrapper_checkpoint.txt
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 07:03 boinc_mmap_file
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas      4624 Nov 27 07:03 pilotlog.txt
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas   3240304 Nov 27 07:03 log.47556161._004754.job.log.1
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas       353 Nov 27 07:03 output.list
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas       620 Nov 27 07:03 runtime_log
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas   4945920 Nov 27 07:03 result.tar.gz
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas       666 Nov 27 07:03 Z7YNDmtJMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7vJKDm3DudJm.diag
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 07:03 runtime_log.err
[2025-11-27 07:03:52] -rw-r--r-- 1 boincer umatlas     21277 Nov 27 07:03 stderr.txt
[2025-11-27 07:03:52] HITS file was successfully produced:
[2025-11-27 07:03:52] -rw------- 1 boincer umatlas 915414869 Nov 27 07:02 shared/HITS.pool.root.1
[2025-11-27 07:03:52]  *** Contents of shared directory: ***
[2025-11-27 07:03:53] total 1300608
[2025-11-27 07:03:53] -rw-r--r-- 2 boincer umatlas 410844293 Nov 27 00:42 ATLAS.root_0
[2025-11-27 07:03:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 00:42 start_atlas.sh
[2025-11-27 07:03:53] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 00:42 input.tar.gz
[2025-11-27 07:03:53] -rw------- 1 boincer umatlas 915414869 Nov 27 07:02 HITS.pool.root.1
[2025-11-27 07:03:53] -rw------- 1 boincer umatlas   4945920 Nov 27 07:03 result.tar.gz
07:03:54 (16924): run_atlas exited; CPU time 177016.961624
07:03:54 (16924): called boinc_finish(0)

</stderr_txt>
]]>

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