Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:36:06 (1339577): wrapper (7.7.26015): starting
03:36:06 (1339577): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 03:36:06] Arguments: --nthreads 8
[2025-11-27 03:36:06] Threads: 8
[2025-11-27 03:36:06] Checking for CVMFS
[2025-11-27 03:36:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 03:36:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 03:36:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 03:36:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 03:36:06] 2.13.3.0 11314 31259 226900 153356 2 373 25763859 32935937 64572 16776704 0 253264093 99.661 240045091 33607 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 03:36:06] CVMFS is ok
[2025-11-27 03:36:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:36:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:36:06] Further information can be found at the LHC@home message board.
[2025-11-27 03:36:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:36:06] Checking for apptainer binary...
[2025-11-27 03:36:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 03:36:06] Running /usr/bin/apptainer --version
[2025-11-27 03:36:06] apptainer version 1.4.4-1.el9
[2025-11-27 03:36:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:36:07] c7-2-10.aglt2.org
[2025-11-27 03:36:07] apptainer works
[2025-11-27 03:36:07] Set ATHENA_PROC_NUMBER=8
[2025-11-27 03:36:07] Set ATHENA_CORE_NUMBER=8
[2025-11-27 03:36:07] Starting ATLAS job with PandaID=6897864769
[2025-11-27 03:36:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:59:13]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:59:13] 2025-11-28 00:58:19,055 | INFO     | monitor loop #3307: job 0:6897864769 is in state 'finished'
[2025-11-27 19:59:13] 2025-11-28 00:58:19,055 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:59:13] 2025-11-28 00:58:19,675 | INFO     | time since job start (58916s) is within the limit (172800.0s)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,016 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 19:59:13] 2025-11-28 00:58:20,028 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3392.842552083333
[2025-11-27 19:59:13] 2025-11-28 00:58:20,041 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897864769/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,042 | INFO     | extracted standard info from prmon json
[2025-11-27 19:59:13] 2025-11-28 00:58:20,042 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:59:13] 2025-11-28 00:58:20,042 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:59:13] 2025-11-28 00:58:20,224 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:59:13] 2025-11-28 00:58:20,225 | INFO     | sum of square deviations: 278660460173.4571
[2025-11-27 19:59:13] 2025-11-28 00:58:20,260 | INFO     | sum of deviations: 2865044008031.6626
[2025-11-27 19:59:13] 2025-11-28 00:58:20,260 | INFO     | mean x: 1764262026.1626942
[2025-11-27 19:59:13] 2025-11-28 00:58:20,260 | INFO     | mean y: 2960386.6518134717
[2025-11-27 19:59:13] 2025-11-28 00:58:20,260 | INFO     | intersect: -18136277392.21659
[2025-11-27 19:59:13] 2025-11-28 00:58:20,261 | INFO     | chi2: 6.994360536803716
[2025-11-27 19:59:13] 2025-11-28 00:58:20,266 | INFO     | sum of square deviations: 274351847166.6627
[2025-11-27 19:59:13] 2025-11-28 00:58:20,302 | INFO     | sum of deviations: 3216904204580.899
[2025-11-27 19:59:13] 2025-11-28 00:58:20,302 | INFO     | mean x: 1764261873.66875
[2025-11-27 19:59:13] 2025-11-28 00:58:20,302 | INFO     | mean y: 2972844.3833333333
[2025-11-27 19:59:13] 2025-11-28 00:58:20,302 | INFO     | intersect: -20683825870.476635
[2025-11-27 19:59:13] 2025-11-28 00:58:20,303 | INFO     | chi2: 3.4844465566125296
[2025-11-27 19:59:13] 2025-11-28 00:58:20,303 | INFO     | current chi2=3.4844465566125296 (change=50.18205684025473 %)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,304 | INFO     | sum of square deviations: 270087769408.49243
[2025-11-27 19:59:13] 2025-11-28 00:58:20,343 | INFO     | sum of deviations: 3271350818082.6694
[2025-11-27 19:59:13] 2025-11-28 00:58:20,343 | INFO     | mean x: 1764261721.1727748
[2025-11-27 19:59:13] 2025-11-28 00:58:20,343 | INFO     | mean y: 2974783.2565445025
[2025-11-27 19:59:13] 2025-11-28 00:58:20,343 | INFO     | intersect: -21366075127.853645
[2025-11-27 19:59:13] 2025-11-28 00:58:20,344 | INFO     | chi2: 3.1213279310167144
[2025-11-27 19:59:13] 2025-11-28 00:58:20,344 | INFO     | current chi2=3.1213279310167144 (change=10.421127708407955 %)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,344 | INFO     | right removable region: 954
[2025-11-27 19:59:13] 2025-11-28 00:58:20,345 | INFO     | sum of square deviations: 274351162746.66257
[2025-11-27 19:59:13] 2025-11-28 00:58:20,379 | INFO     | sum of deviations: 2535747061432.195
[2025-11-27 19:59:13] 2025-11-28 00:58:20,379 | INFO     | mean x: 1764262178.66875
[2025-11-27 19:59:13] 2025-11-28 00:58:20,380 | INFO     | mean y: 2972033.9
[2025-11-27 19:59:13] 2025-11-28 00:58:20,380 | INFO     | intersect: -16303584097.908
[2025-11-27 19:59:13] 2025-11-28 00:58:20,380 | INFO     | chi2: 4.215348406472284
[2025-11-27 19:59:13] 2025-11-28 00:58:20,381 | INFO     | current chi2=4.215348406472284 (change=39.73218303100779 %)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,381 | INFO     | sum of square deviations: 270086692637.83624
[2025-11-27 19:59:13] 2025-11-28 00:58:20,440 | INFO     | sum of deviations: 2449141020986.8833
[2025-11-27 19:59:13] 2025-11-28 00:58:20,440 | INFO     | mean x: 1764262331.1717277
[2025-11-27 19:59:13] 2025-11-28 00:58:20,440 | INFO     | mean y: 2975130.403141361
[2025-11-27 19:59:13] 2025-11-28 00:58:20,440 | INFO     | intersect: -15995322323.106083
[2025-11-27 19:59:13] 2025-11-28 00:58:20,441 | INFO     | chi2: 4.152133471100923
[2025-11-27 19:59:13] 2025-11-28 00:58:20,441 | INFO     | current chi2=4.152133471100923 (change=1.4996372606900146 %)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,441 | INFO     | left removable region: 20
[2025-11-27 19:59:13] 2025-11-28 00:58:20,442 | INFO     | sum of square deviations: 252659386105.45627
[2025-11-27 19:59:13] 2025-11-28 00:58:20,477 | INFO     | sum of deviations: 2703712780556.9395
[2025-11-27 19:59:13] 2025-11-28 00:58:20,477 | INFO     | mean x: 1764262300.6852248
[2025-11-27 19:59:13] 2025-11-28 00:58:20,478 | INFO     | mean y: 2994844.118843683
[2025-11-27 19:59:13] 2025-11-28 00:58:20,478 | INFO     | intersect: -18876408783.603424
[2025-11-27 19:59:13] 2025-11-28 00:58:20,478 | INFO     | chi2: 0.19199075439928995
[2025-11-27 19:59:13] 2025-11-28 00:58:20,479 | INFO     | current memory leak: 10.70 B/s (using 934 data points, chi2=0.19)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | could have reported an average CPU frequency of 3405 MHz (36 samples)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | ..............................
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . Timing measurements:
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . get job = 0 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . initial setup = 2 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . payload setup = 12 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . stage-in = 0 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . payload execution = 58861 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . stage-out = 5 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | . log creation = 1 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,484 | INFO     | ..............................
[2025-11-27 19:59:13] 2025-11-28 00:58:20,663 | INFO     | 
[2025-11-27 19:59:13] 2025-11-28 00:58:20,663 | INFO     | job summary report
[2025-11-27 19:59:13] 2025-11-28 00:58:20,663 | INFO     | --------------------------------------------------
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | PanDA job id: 6897864769
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | task id: 47556161
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | errors: (none)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | pilot state: finished 
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | transexitcode: 0
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | exeerrorcode: 0
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | exeerrordiag: 
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | exitcode: 0
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | exitmsg: OK
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | cpuconsumptiontime: 181119 s
[2025-11-27 19:59:13] 2025-11-28 00:58:20,664 | INFO     | nevents: 1000
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | neventsw: 0
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | pid: 1364288
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | pgrp: 1364288
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | corecount: 8
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | event service: False
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | sizes: {0: 2284265, 8: 2284527, 11: 2284555, 58877: 2336207, 58878: 2336206, 58885: 2345256, 58886: 2345440, 58898: 2345686}
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | --------------------------------------------------
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | 
[2025-11-27 19:59:13] 2025-11-28 00:58:20,665 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 19:59:13] 2025-11-28 00:58:20,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | job 6897864769 has completed (purged errors)
[2025-11-27 19:59:13] 2025-11-28 00:58:20,707 | INFO     | overall cleanup function is called
[2025-11-27 19:59:13] 2025-11-28 00:58:21,723 | INFO     | --- collectZombieJob: --- 10, [1364288]
[2025-11-27 19:59:13] 2025-11-28 00:58:21,723 | INFO     | zombie collector waiting for pid 1364288
[2025-11-27 19:59:13] 2025-11-28 00:58:21,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:59:13] 2025-11-28 00:58:21,724 | INFO     | collected zombie processes
[2025-11-27 19:59:13] 2025-11-28 00:58:21,724 | INFO     | will attempt to kill all subprocesses of pid=1364288
[2025-11-27 19:59:13] 2025-11-28 00:58:23,488 | INFO     | process IDs to be killed: [1364288] (in reverse order)
[2025-11-27 19:59:13] 2025-11-28 00:58:23,787 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:59:13] 2025-11-28 00:58:23,787 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:59:13] 2025-11-28 00:58:23,839 | INFO     | did not find any defunct processes belonging to 1364288
[2025-11-27 19:59:13] 2025-11-28 00:58:23,904 | INFO     | did not find any defunct processes belonging to 1364288
[2025-11-27 19:59:13] 2025-11-28 00:58:23,905 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:59:13] 2025-11-28 00:58:23,905 | INFO     | ready for new job
[2025-11-27 19:59:13] 2025-11-28 00:58:23,905 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:59:13] 2025-11-28 00:58:23,909 | INFO     | ***************************************
[2025-11-27 19:59:13] 2025-11-28 00:58:23,909 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:59:13] 2025-11-28 00:58:23,909 | INFO     | ***************************************
[2025-11-27 19:59:13] 2025-11-28 00:58:23,909 | INFO     | 
[2025-11-27 19:59:13] 2025-11-28 00:58:23,914 | INFO     | architecture information:
[2025-11-27 19:59:13] 2025-11-28 00:58:23,915 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:59:13] 2025-11-28 00:58:23,951 | INFO     | cat /etc/os-release:
[2025-11-27 19:59:13] NAME="CentOS Linux"
[2025-11-27 19:59:13] VERSION="7 (Core)"
[2025-11-27 19:59:13] ID="centos"
[2025-11-27 19:59:13] ID_LIKE="rhel fedora"
[2025-11-27 19:59:13] VERSION_ID="7"
[2025-11-27 19:59:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:59:13] ANSI_COLOR="0;31"
[2025-11-27 19:59:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:59:13] HOME_URL="https://www.centos.org/"
[2025-11-27 19:59:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:59:13] 
[2025-11-27 19:59:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:59:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:59:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:59:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:59:13] 
[2025-11-27 19:59:13] 2025-11-28 00:58:23,951 | INFO     | ***************************************
[2025-11-27 19:59:13] 2025-11-28 00:58:24,454 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 19:59:13] 2025-11-28 00:58:24,491 | INFO     | sufficient remaining disk space (67283976192 B)
[2025-11-27 19:59:13] 2025-11-28 00:58:24,491 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:59:13] 2025-11-28 00:58:24,491 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:59:13] 2025-11-28 00:58:24,491 | INFO     | update_server=False
[2025-11-27 19:59:13] 2025-11-28 00:58:24,491 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:59:13] 2025-11-28 00:58:24,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:59:13] 2025-11-28 00:58:24,492 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:59:13] 2025-11-28 00:58:24,870 | INFO     | all job control threads have been joined
[2025-11-27 19:59:13] 2025-11-28 00:58:25,135 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:59:13] 2025-11-28 00:58:25,135 | INFO     | aborting loop
[2025-11-27 19:59:13] 2025-11-28 00:58:25,497 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:25,544 | INFO     | all data control threads have been joined
[2025-11-27 19:59:13] 2025-11-28 00:58:25,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:59:13] 2025-11-28 00:58:25,703 | INFO     | all payload control threads have been joined
[2025-11-27 19:59:13] 2025-11-28 00:58:25,765 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:25,884 | INFO     | [job] control thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,062 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,141 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,288 | INFO     | [job] validate thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,440 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,503 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,551 | INFO     | [data] control thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,674 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,684 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,709 | INFO     | [payload] control thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,716 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,786 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:26,813 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:28,503 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:59:13] 2025-11-28 00:58:53,889 | INFO     | PID=1347040 has CPU usage=10.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 19:59:13] 2025-11-28 00:58:53,889 | INFO     | .. there are 89 such processes running
[2025-11-27 19:59:13] 2025-11-28 00:58:53,893 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:59:13] 2025-11-28 00:58:53,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:59:13] 2025-11-28 00:58:53,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:59:13] 2025-11-28 00:59:07,104 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:59:13] 2025-11-28 00:59:07,839 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532103894848)>', '<ExcThread(monitor, started 140531757721344)>']
[2025-11-27 19:59:13] 2025-11-28 00:59:08,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:59:13] 2025-11-28 00:59:08,039 | INFO     | [monitor] control thread has ended
[2025-11-27 19:59:13] 2025-11-28 00:59:12,865 | INFO     | all workflow threads have been joined
[2025-11-27 19:59:13] 2025-11-28 00:59:12,865 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:59:13] 2025-11-28 00:59:12,869 | INFO     | traces error code: 0
[2025-11-27 19:59:13] 2025-11-28 00:59:12,869 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:59:13] 2025-11-28 00:59:13,095 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:59:13] 2025-11-28 00:59:13,101 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:59:13] 2025-11-28 00:59:13,111 [wrapper] pilotpid: 1347040
[2025-11-27 19:59:13] 2025-11-28 00:59:13,136 [wrapper] Pilot exit status: 0
[2025-11-27 19:59:13] 2025-11-28 00:59:13,162 [wrapper] pandaids: 6897864769
[2025-11-27 19:59:13] 2025-11-28 00:59:13,388 [wrapper] cleanup supervisor_pilot 2079965 1347041
[2025-11-27 19:59:13] 2025-11-28 00:59:13,392 [wrapper] Test setup, not cleaning
[2025-11-27 19:59:13] 2025-11-28 00:59:13,396 [wrapper] apfmon messages muted
[2025-11-27 19:59:13] 2025-11-28 00:59:13,399 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:59:13] 2025-11-28 00:59:13,402 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:59:13]  *** Error codes and diagnostics ***
[2025-11-27 19:59:13]     "exeErrorCode": 0,
[2025-11-27 19:59:13]     "exeErrorDiag": "",
[2025-11-27 19:59:13]     "pilotErrorCode": 0,
[2025-11-27 19:59:13]     "pilotErrorDiag": "",
[2025-11-27 19:59:13]  *** Listing of results directory ***
[2025-11-27 19:59:13] total 1314092
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 19:59:13] -rwx------. 1 boincer umatlas     36292 Nov 25 12:02 runpilot2-wrapper.sh
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas       100 Nov 27 03:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:59:13] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 03:36 run_atlas
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas       105 Nov 27 03:36 job.xml
[2025-11-27 19:59:13] -rw-r--r--. 2 boincer umatlas 410867847 Nov 27 03:36 EVNT.47483658._002342.pool.root.1
[2025-11-27 19:59:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 03:36 start_atlas.sh
[2025-11-27 19:59:13] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 03:36 shared
[2025-11-27 19:59:13] -rw-r--r--. 2 boincer umatlas    590112 Nov 27 03:36 input.tar.gz
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas         0 Nov 27 03:36 boinc_lockfile
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 03:36 pandaJob.out
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas        57 Nov 27 03:36 setup.sh.local
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas    991573 Nov 27 03:36 agis_schedconf.cvmfs.json
[2025-11-27 19:59:13] drwx------. 5 boincer umatlas      4096 Nov 27 03:36 pilot3
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:48 boinc_task_state.xml
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 19:56 init_data.xml
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas 912339631 Nov 27 19:57 HITS.47556161._003250.pool.root.1
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas      1070 Nov 27 19:57 memory_monitor_summary.json
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas   2089645 Nov 27 19:58 log.47556161._003250.job.log.tgz.1
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas      8627 Nov 27 19:58 heartbeat.json
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas        95 Nov 27 19:58 pilot_heartbeat.json
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:59 boinc_mmap_file
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:59 wrapper_checkpoint.txt
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas      4825 Nov 27 19:59 pilotlog.txt
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas   7157222 Nov 27 19:59 log.47556161._003250.job.log.1
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas       353 Nov 27 19:59 output.list
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:59 runtime_log
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas   9267200 Nov 27 19:59 result.tar.gz
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:59 runtime_log.err
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas       663 Nov 27 19:59 hhTLDmlbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqjJKDm1mB6Lo.diag
[2025-11-27 19:59:13] -rw-r--r--. 1 boincer umatlas     21340 Nov 27 19:59 stderr.txt
[2025-11-27 19:59:13] HITS file was successfully produced:
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas 912339631 Nov 27 19:57 shared/HITS.pool.root.1
[2025-11-27 19:59:13]  *** Contents of shared directory: ***
[2025-11-27 19:59:13] total 1301856
[2025-11-27 19:59:13] -rw-r--r--. 2 boincer umatlas 410867847 Nov 27 03:36 ATLAS.root_0
[2025-11-27 19:59:13] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 03:36 start_atlas.sh
[2025-11-27 19:59:13] -rw-r--r--. 2 boincer umatlas    590112 Nov 27 03:36 input.tar.gz
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas 912339631 Nov 27 19:57 HITS.pool.root.1
[2025-11-27 19:59:13] -rw-------. 1 boincer umatlas   9267200 Nov 27 19:59 result.tar.gz
19:59:35 (1339577): run_atlas exited; CPU time 182985.788026
19:59:35 (1339577): called boinc_finish(0)

</stderr_txt>
]]>

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