Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:26:12 (2752332): wrapper (7.7.26015): starting
06:26:12 (2752332): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 06:26:12] Arguments: --nthreads 3
[2025-11-27 06:26:12] Threads: 3
[2025-11-27 06:26:12] Checking for CVMFS
[2025-11-27 06:26:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:26:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:26:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:26:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:26:13] 2.9.2.0 2210343 116 63376 153349 3 88 35884919 36864001 0 130560 0 1627754 99.999 6758 20922 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 06:26:13] CVMFS is ok
[2025-11-27 06:26:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:26:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:26:13] Further information can be found at the LHC@home message board.
[2025-11-27 06:26:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:26:13] Checking for apptainer binary...
[2025-11-27 06:26:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:26:13] Running /usr/bin/apptainer --version
[2025-11-27 06:26:13] apptainer version 1.4.1-1.1
[2025-11-27 06:26:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:26:13] thA335
[2025-11-27 06:26:13] apptainer works
[2025-11-27 06:26:13] Set ATHENA_PROC_NUMBER=3
[2025-11-27 06:26:13] Set ATHENA_CORE_NUMBER=3
[2025-11-27 06:26:13] Starting ATLAS job with PandaID=6898178716
[2025-11-27 06:26:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:30:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:30:30] 2025-11-27 05:29:43,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:30:30] 2025-11-27 05:29:43,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:30:30] 2025-11-27 05:29:43,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:30:30] 2025-11-27 05:29:43,234 | INFO     | aborting loop
[2025-11-27 06:30:30] 2025-11-27 05:29:43,524 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:30:30] 2025-11-27 05:29:43,647 | INFO     | all job control threads have been joined
[2025-11-27 06:30:30] 2025-11-27 05:29:43,759 | INFO     | all data control threads have been joined
[2025-11-27 06:30:30] 2025-11-27 05:29:44,210 | INFO     | all payload control threads have been joined
[2025-11-27 06:30:30] 2025-11-27 05:29:44,239 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:44,240 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:44,241 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:44,506 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:44,653 | INFO     | [job] control thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:44,765 | INFO     | [data] control thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,064 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,075 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,143 | INFO     | [job] validate thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,216 | INFO     | [payload] control thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,222 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,296 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,408 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,531 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,744 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:29:45,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:30:30] 2025-11-27 05:29:49,838 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:30:30] 2025-11-27 05:30:12,805 | INFO     | PID=2756062 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:30:30] 2025-11-27 05:30:12,805 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:30:30] 2025-11-27 05:30:12,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:30:30] 2025-11-27 05:30:12,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:30:30] 2025-11-27 05:30:23,966 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:30:30] 2025-11-27 05:30:25,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140124160620352)>', '<ExcThread(monitor, started 140123299636992)>']
[2025-11-27 06:30:30] 2025-11-27 05:30:25,872 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:30:30] 2025-11-27 05:30:25,872 | INFO     | [monitor] control thread has ended
[2025-11-27 06:30:30] 2025-11-27 05:30:30,703 | INFO     | all workflow threads have been joined
[2025-11-27 06:30:30] 2025-11-27 05:30:30,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:30:30] 2025-11-27 05:30:30,703 | INFO     | traces error code: 0
[2025-11-27 06:30:30] 2025-11-27 05:30:30,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:30:30] 2025-11-27 05:30:30,751 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:30:30] 2025-11-27 05:30:30,754 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:30:30] 2025-11-27 05:30:30,757 [wrapper] pilotpid: 2756062
[2025-11-27 06:30:30] 2025-11-27 05:30:30,760 [wrapper] Pilot exit status: 0
[2025-11-27 06:30:30] 2025-11-27 05:30:30,767 [wrapper] pandaids: 6898178716
[2025-11-27 06:30:30] 2025-11-27 05:30:30,784 [wrapper] cleanup supervisor_pilot 2756068 2756063
[2025-11-27 06:30:30] 2025-11-27 05:30:30,787 [wrapper] Test setup, not cleaning
[2025-11-27 06:30:30] 2025-11-27 05:30:30,790 [wrapper] apfmon messages muted
[2025-11-27 06:30:30] 2025-11-27 05:30:30,792 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:30:30] 2025-11-27 05:30:30,795 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:30:30]  *** Error codes and diagnostics ***
[2025-11-27 06:30:30]     "exeErrorCode": 65,
[2025-11-27 06:30:30]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 06:30:30]     "pilotErrorCode": 1305,
[2025-11-27 06:30:30]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 06:30:30]  *** Listing of results directory ***
[2025-11-27 06:30:30] total 401968
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc    576529 Nov 26 04:33 pilot3.tar.gz
[2025-11-27 06:30:30] -rwx------ 1 boinc boinc     36292 Nov 26 05:15 runpilot2-wrapper.sh
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc      5112 Nov 26 05:15 queuedata.json
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc       100 Nov 27 06:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:30:30] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 06:26 run_atlas
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc       105 Nov 27 06:26 job.xml
[2025-11-27 06:30:30] -rw-r--r-- 2 boinc boinc 407414678 Nov 27 06:26 EVNT.47483658._003175.pool.root.1
[2025-11-27 06:30:30] -rw-r--r-- 2 boinc boinc    590100 Nov 27 06:26 input.tar.gz
[2025-11-27 06:30:30] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:26 start_atlas.sh
[2025-11-27 06:30:30] drwxrwx--x 2 boinc boinc      4096 Nov 27 06:26 shared
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:26 boinc_setup_complete
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc      6196 Nov 27 06:26 init_data.xml
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:26 boinc_lockfile
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc      2785 Nov 27 06:26 pandaJob.out
[2025-11-27 06:30:30] -rw------- 1 boinc boinc    991578 Nov 27 06:26 agis_schedconf.cvmfs.json
[2025-11-27 06:30:30] -rw------- 1 boinc boinc   1516240 Nov 27 06:26 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:30:30] drwx------ 5 boinc boinc      4096 Nov 27 06:26 pilot3
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc       522 Nov 27 06:27 boinc_task_state.xml
[2025-11-27 06:30:30] -rw------- 1 boinc boinc       951 Nov 27 06:27 memory_monitor_summary.json
[2025-11-27 06:30:30] -rw------- 1 boinc boinc     55804 Nov 27 06:27 log.47556173._001319.job.log.tgz.1
[2025-11-27 06:30:30] -rw------- 1 boinc boinc        95 Nov 27 06:29 pilot_heartbeat.json
[2025-11-27 06:30:30] -rw------- 1 boinc boinc      8412 Nov 27 06:29 heartbeat.json
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc      8192 Nov 27 06:30 boinc_mmap_file
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc        22 Nov 27 06:30 wrapper_checkpoint.txt
[2025-11-27 06:30:30] -rw------- 1 boinc boinc      4752 Nov 27 06:30 pilotlog.txt
[2025-11-27 06:30:30] -rw------- 1 boinc boinc     93899 Nov 27 06:30 log.47556173._001319.job.log.1
[2025-11-27 06:30:30] -rw------- 1 boinc boinc       186 Nov 27 06:30 output.list
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc       620 Nov 27 06:30 runtime_log
[2025-11-27 06:30:30] -rw------- 1 boinc boinc    174080 Nov 27 06:30 result.tar.gz
[2025-11-27 06:30:30] -rw------- 1 boinc boinc       649 Nov 27 06:30 sLFNDmq7Li8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJuJKDm5PzHUm.diag
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc      8744 Nov 27 06:30 runtime_log.err
[2025-11-27 06:30:30] -rw-r--r-- 1 boinc boinc      7710 Nov 27 06:30 stderr.txt
[2025-11-27 06:30:30] No HITS result produced
[2025-11-27 06:30:30]  *** Contents of shared directory: ***
[2025-11-27 06:30:30] total 398640
[2025-11-27 06:30:30] -rw-r--r-- 2 boinc boinc 407414678 Nov 27 06:26 ATLAS.root_0
[2025-11-27 06:30:30] -rw-r--r-- 2 boinc boinc    590100 Nov 27 06:26 input.tar.gz
[2025-11-27 06:30:30] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:26 start_atlas.sh
[2025-11-27 06:30:30] -rw------- 1 boinc boinc    174080 Nov 27 06:30 result.tar.gz
06:30:32 (2752332): run_atlas exited; CPU time 32.120892
06:30:32 (2752332): called boinc_finish(0)

</stderr_txt>
]]>

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