Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:12:09 (17313): wrapper (7.7.26015): starting
01:12:09 (17313): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:12:09] Arguments: --nthreads 8
[2025-11-27 01:12:09] Threads: 8
[2025-11-27 01:12:09] Checking for CVMFS
[2025-11-27 01:12:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:12:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:12:09] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:12:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:12:10] 2.11.2.0 2880 154461 88068 153349 3 82 12357326 20275200 1 130560 0 60241696 99.975 5470967 22186 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:12:10] CVMFS is ok
[2025-11-27 01:12:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:12:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:12:10] Further information can be found at the LHC@home message board.
[2025-11-27 01:12:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:12:10] Checking for apptainer binary...
[2025-11-27 01:12:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:12:10] Running /usr/bin/apptainer --version
[2025-11-27 01:12:10] apptainer version 1.3.2-1.el7
[2025-11-27 01:12:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:12:11] c-115-10.aglt2.org
[2025-11-27 01:12:11] apptainer works
[2025-11-27 01:12:11] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:12:11] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:12:11] Starting ATLAS job with PandaID=6898212815
[2025-11-27 01:12:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:24:41]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:24:41] 2025-11-27 17:23:46,448 | INFO     | monitor loop #2943: job 0:6898212815 is in state 'finished'
[2025-11-27 12:24:41] 2025-11-27 17:23:46,449 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,813 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 12:24:41] 2025-11-27 17:23:46,818 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-27 12:24:41] 2025-11-27 17:23:46,820 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6898212815/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,820 | INFO     | extracted standard info from prmon json
[2025-11-27 12:24:41] 2025-11-27 17:23:46,820 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:24:41] 2025-11-27 17:23:46,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:24:41] 2025-11-27 17:23:46,830 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:24:41] 2025-11-27 17:23:46,831 | INFO     | sum of square deviations: 89147208981.61208
[2025-11-27 12:24:41] 2025-11-27 17:23:46,839 | INFO     | sum of deviations: 687688586631.9208
[2025-11-27 12:24:41] 2025-11-27 17:23:46,839 | INFO     | mean x: 1764244079.1575758
[2025-11-27 12:24:41] 2025-11-27 17:23:46,839 | INFO     | mean y: 3215291.625757576
[2025-11-27 12:24:41] 2025-11-27 17:23:46,839 | INFO     | intersect: -13606302394.114227
[2025-11-27 12:24:41] 2025-11-27 17:23:46,840 | INFO     | chi2: 6.104142332723449
[2025-11-27 12:24:41] 2025-11-27 17:23:46,841 | INFO     | sum of square deviations: 87136568764.43352
[2025-11-27 12:24:41] 2025-11-27 17:23:46,849 | INFO     | sum of deviations: 923707987661.9431
[2025-11-27 12:24:41] 2025-11-27 17:23:46,849 | INFO     | mean x: 1764243926.6625955
[2025-11-27 12:24:41] 2025-11-27 17:23:46,849 | INFO     | mean y: 3233186.1038167938
[2025-11-27 12:24:41] 2025-11-27 17:23:46,849 | INFO     | intersect: -18698974513.259743
[2025-11-27 12:24:41] 2025-11-27 17:23:46,850 | INFO     | chi2: 3.171904169635224
[2025-11-27 12:24:41] 2025-11-27 17:23:46,850 | INFO     | current chi2=3.171904169635224 (change=48.036857649417975 %)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,850 | INFO     | sum of square deviations: 85156394234.72156
[2025-11-27 12:24:41] 2025-11-27 17:23:46,858 | INFO     | sum of deviations: 1008110527591.1306
[2025-11-27 12:24:41] 2025-11-27 17:23:46,858 | INFO     | mean x: 1764243774.1676924
[2025-11-27 12:24:41] 2025-11-27 17:23:46,859 | INFO     | mean y: 3239672.053846154
[2025-11-27 12:24:41] 2025-11-27 17:23:46,859 | INFO     | intersect: -20882481687.55693
[2025-11-27 12:24:41] 2025-11-27 17:23:46,859 | INFO     | chi2: 2.6282536755199284
[2025-11-27 12:24:41] 2025-11-27 17:23:46,859 | INFO     | current chi2=2.6282536755199284 (change=17.139562390304395 %)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,860 | INFO     | right removable region: 649
[2025-11-27 12:24:41] 2025-11-27 17:23:46,860 | INFO     | sum of square deviations: 87136304024.43361
[2025-11-27 12:24:41] 2025-11-27 17:23:46,868 | INFO     | sum of deviations: 478802808121.8712
[2025-11-27 12:24:41] 2025-11-27 17:23:46,868 | INFO     | mean x: 1764244231.6625955
[2025-11-27 12:24:41] 2025-11-27 17:23:46,868 | INFO     | mean y: 3231103.451908397
[2025-11-27 12:24:41] 2025-11-27 17:23:46,869 | INFO     | intersect: -9691064538.190147
[2025-11-27 12:24:41] 2025-11-27 17:23:46,869 | INFO     | chi2: 3.6695706094286824
[2025-11-27 12:24:41] 2025-11-27 17:23:46,869 | INFO     | current chi2=3.6695706094286824 (change=39.88392784099037 %)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,870 | INFO     | sum of square deviations: 85155984742.71364
[2025-11-27 12:24:41] 2025-11-27 17:23:46,878 | INFO     | sum of deviations: 429764211223.22455
[2025-11-27 12:24:41] 2025-11-27 17:23:46,878 | INFO     | mean x: 1764244384.1630769
[2025-11-27 12:24:41] 2025-11-27 17:23:46,878 | INFO     | mean y: 3234879.667692308
[2025-11-27 12:24:41] 2025-11-27 17:23:46,878 | INFO     | intersect: -8900532699.97649
[2025-11-27 12:24:41] 2025-11-27 17:23:46,879 | INFO     | chi2: 3.6046167697206086
[2025-11-27 12:24:41] 2025-11-27 17:23:46,879 | INFO     | current chi2=3.6046167697206086 (change=1.7700664906455221 %)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,879 | INFO     | left removable region: 20
[2025-11-27 12:24:41] 2025-11-27 17:23:46,880 | INFO     | sum of square deviations: 77166392890.53436
[2025-11-27 12:24:41] 2025-11-27 17:23:46,890 | INFO     | sum of deviations: 680317191921.0206
[2025-11-27 12:24:41] 2025-11-27 17:23:46,890 | INFO     | mean x: 1764244353.672496
[2025-11-27 12:24:41] 2025-11-27 17:23:46,890 | INFO     | mean y: 3265162.26709062
[2025-11-27 12:24:41] 2025-11-27 17:23:46,891 | INFO     | intersect: -15550730814.39618
[2025-11-27 12:24:41] 2025-11-27 17:23:46,891 | INFO     | chi2: 0.06970583240410216
[2025-11-27 12:24:41] 2025-11-27 17:23:46,891 | INFO     | current memory leak: 8.82 B/s (using 629 data points, chi2=0.07)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,892 | INFO     | could have reported an average CPU frequency of 2410 MHz (25 samples)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,892 | INFO     | ..............................
[2025-11-27 12:24:41] 2025-11-27 17:23:46,892 | INFO     | . Timing measurements:
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . get job = 0 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . initial setup = 2 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . payload setup = 8 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . stage-in = 0 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . payload execution = 40238 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . stage-out = 3 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | . log creation = 0 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,893 | INFO     | ..............................
[2025-11-27 12:24:41] 2025-11-27 17:23:46,973 | INFO     | 
[2025-11-27 12:24:41] 2025-11-27 17:23:46,973 | INFO     | job summary report
[2025-11-27 12:24:41] 2025-11-27 17:23:46,973 | INFO     | --------------------------------------------------
[2025-11-27 12:24:41] 2025-11-27 17:23:46,974 | INFO     | PanDA job id: 6898212815
[2025-11-27 12:24:41] 2025-11-27 17:23:46,974 | INFO     | task id: 47556161
[2025-11-27 12:24:41] 2025-11-27 17:23:46,974 | INFO     | errors: (none)
[2025-11-27 12:24:41] 2025-11-27 17:23:46,974 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:24:41] 2025-11-27 17:23:46,974 | INFO     | pilot state: finished 
[2025-11-27 12:24:41] 2025-11-27 17:23:46,974 | INFO     | transexitcode: 0
[2025-11-27 12:24:41] 2025-11-27 17:23:46,975 | INFO     | exeerrorcode: 0
[2025-11-27 12:24:41] 2025-11-27 17:23:46,975 | INFO     | exeerrordiag: 
[2025-11-27 12:24:41] 2025-11-27 17:23:46,975 | INFO     | exitcode: 0
[2025-11-27 12:24:41] 2025-11-27 17:23:46,975 | INFO     | exitmsg: OK
[2025-11-27 12:24:41] 2025-11-27 17:23:46,975 | INFO     | cpuconsumptiontime: 313293 s
[2025-11-27 12:24:41] 2025-11-27 17:23:46,975 | INFO     | nevents: 1000
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | neventsw: 0
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | pid: 27442
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | pgrp: 27442
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | corecount: 8
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | event service: False
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | sizes: {0: 2284093, 1: 2284292, 6: 2284554, 11: 2284582, 40250: 2328172, 40254: 2337166, 40255: 2337350, 40261: 2337660}
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | --------------------------------------------------
[2025-11-27 12:24:41] 2025-11-27 17:23:46,976 | INFO     | 
[2025-11-27 12:24:41] 2025-11-27 17:23:46,977 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 12:24:41] 2025-11-27 17:23:47,005 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,006 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,006 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,006 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,006 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,006 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,007 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,007 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,007 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,007 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,007 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,007 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:24:41] 2025-11-27 17:23:47,008 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,009 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:24:41] 2025-11-27 17:23:47,009 | INFO     | job 6898212815 has completed (purged errors)
[2025-11-27 12:24:41] 2025-11-27 17:23:47,009 | INFO     | overall cleanup function is called
[2025-11-27 12:24:41] 2025-11-27 17:23:48,024 | INFO     | --- collectZombieJob: --- 10, [27442]
[2025-11-27 12:24:41] 2025-11-27 17:23:48,025 | INFO     | zombie collector waiting for pid 27442
[2025-11-27 12:24:41] 2025-11-27 17:23:48,025 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:24:41] 2025-11-27 17:23:48,025 | INFO     | collected zombie processes
[2025-11-27 12:24:41] 2025-11-27 17:23:48,025 | INFO     | will attempt to kill all subprocesses of pid=27442
[2025-11-27 12:24:41] 2025-11-27 17:23:48,107 | INFO     | process IDs to be killed: [27442] (in reverse order)
[2025-11-27 12:24:41] 2025-11-27 17:23:48,164 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:24:41] 2025-11-27 17:23:48,165 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:24:41] 2025-11-27 17:23:48,168 | INFO     | did not find any defunct processes belonging to 27442
[2025-11-27 12:24:41] 2025-11-27 17:23:48,171 | INFO     | did not find any defunct processes belonging to 27442
[2025-11-27 12:24:41] 2025-11-27 17:23:48,173 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:24:41] 2025-11-27 17:23:48,173 | INFO     | ready for new job
[2025-11-27 12:24:41] 2025-11-27 17:23:48,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:24:41] 2025-11-27 17:23:48,176 | INFO     | ***************************************
[2025-11-27 12:24:41] 2025-11-27 17:23:48,176 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:24:41] 2025-11-27 17:23:48,176 | INFO     | ***************************************
[2025-11-27 12:24:41] 2025-11-27 17:23:48,176 | INFO     | 
[2025-11-27 12:24:41] 2025-11-27 17:23:48,177 | INFO     | architecture information:
[2025-11-27 12:24:41] 2025-11-27 17:23:48,177 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:24:41] 2025-11-27 17:23:48,196 | INFO     | cat /etc/os-release:
[2025-11-27 12:24:41] NAME="CentOS Linux"
[2025-11-27 12:24:41] VERSION="7 (Core)"
[2025-11-27 12:24:41] ID="centos"
[2025-11-27 12:24:41] ID_LIKE="rhel fedora"
[2025-11-27 12:24:41] VERSION_ID="7"
[2025-11-27 12:24:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:24:41] ANSI_COLOR="0;31"
[2025-11-27 12:24:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:24:41] HOME_URL="https://www.centos.org/"
[2025-11-27 12:24:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:24:41] 
[2025-11-27 12:24:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:24:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:24:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:24:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:24:41] 
[2025-11-27 12:24:41] 2025-11-27 17:23:48,196 | INFO     | ***************************************
[2025-11-27 12:24:41] 2025-11-27 17:23:48,699 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 12:24:41] 2025-11-27 17:23:48,720 | INFO     | sufficient remaining disk space (17487101952 B)
[2025-11-27 12:24:41] 2025-11-27 17:23:48,720 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:24:41] 2025-11-27 17:23:48,720 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:24:41] 2025-11-27 17:23:48,721 | INFO     | update_server=False
[2025-11-27 12:24:41] 2025-11-27 17:23:48,721 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:24:41] 2025-11-27 17:23:48,721 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:24:41] 2025-11-27 17:23:48,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:24:41] 2025-11-27 17:23:48,952 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 12:24:41] 2025-11-27 17:23:48,952 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 12:24:41] 2025-11-27 17:23:48,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:24:41] 2025-11-27 17:23:48,953 | INFO     | will abort loop
[2025-11-27 12:24:41] 2025-11-27 17:23:49,704 | INFO     | all data control threads have been joined
[2025-11-27 12:24:41] 2025-11-27 17:23:49,727 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:49,727 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:49,856 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:49,873 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:49,906 | INFO     | all job control threads have been joined
[2025-11-27 12:24:41] 2025-11-27 17:23:49,947 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:49,948 | INFO     | all payload control threads have been joined
[2025-11-27 12:24:41] 2025-11-27 17:23:49,948 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:49,958 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,429 | INFO     | [job] validate thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,557 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,706 | INFO     | [data] control thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,727 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,850 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,911 | INFO     | [job] control thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:50,953 | INFO     | [payload] control thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:23:51,625 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:24:41] 2025-11-27 17:23:55,629 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:24:41] 2025-11-27 17:24:19,116 | INFO     | PID=20989 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 12:24:41] 2025-11-27 17:24:19,117 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:24:41] 2025-11-27 17:24:19,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:24:41] 2025-11-27 17:24:19,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:24:41] 2025-11-27 17:24:35,004 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:24:41] 2025-11-27 17:24:36,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915018164032)>', '<ExcThread(monitor, started 139914112915200)>']
[2025-11-27 12:24:41] 2025-11-27 17:24:37,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:24:41] 2025-11-27 17:24:37,197 | INFO     | [monitor] control thread has ended
[2025-11-27 12:24:41] 2025-11-27 17:24:41,514 | INFO     | all workflow threads have been joined
[2025-11-27 12:24:41] 2025-11-27 17:24:41,514 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:24:41] 2025-11-27 17:24:41,515 | INFO     | traces error code: 0
[2025-11-27 12:24:41] 2025-11-27 17:24:41,515 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:24:41] 2025-11-27 17:24:41,633 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:24:41] 2025-11-27 17:24:41,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:24:41] 2025-11-27 17:24:41,643 [wrapper] pilotpid: 20989
[2025-11-27 12:24:41] 2025-11-27 17:24:41,648 [wrapper] Pilot exit status: 0
[2025-11-27 12:24:41] 2025-11-27 17:24:41,666 [wrapper] pandaids: 6898212815
[2025-11-27 12:24:41] 2025-11-27 17:24:41,721 [wrapper] cleanup supervisor_pilot  7487 20990
[2025-11-27 12:24:41] 2025-11-27 17:24:41,727 [wrapper] Test setup, not cleaning
[2025-11-27 12:24:41] 2025-11-27 17:24:41,732 [wrapper] apfmon messages muted
[2025-11-27 12:24:41] 2025-11-27 17:24:41,736 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:24:41] 2025-11-27 17:24:41,741 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:24:41]  *** Error codes and diagnostics ***
[2025-11-27 12:24:41]     "exeErrorCode": 0,
[2025-11-27 12:24:41]     "exeErrorDiag": "",
[2025-11-27 12:24:41]     "pilotErrorCode": 0,
[2025-11-27 12:24:41]     "pilotErrorDiag": "",
[2025-11-27 12:24:41]  *** Listing of results directory ***
[2025-11-27 12:24:41] total 1302992
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 23:21 queuedata.json
[2025-11-27 12:24:41] -rwx------ 1 boincer umatlas     36292 Nov 25 23:25 runpilot2-wrapper.sh
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas       100 Nov 27 01:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:24:41] -rwxr-xr-x 1 boincer umatlas      7986 Nov 27 01:12 run_atlas
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas       105 Nov 27 01:12 job.xml
[2025-11-27 12:24:41] -rw-r--r-- 2 boincer umatlas 406577273 Nov 27 01:12 EVNT.47483658._002484.pool.root.1
[2025-11-27 12:24:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:12 start_atlas.sh
[2025-11-27 12:24:41] drwxrwx--x 2 boincer umatlas      4096 Nov 27 01:12 shared
[2025-11-27 12:24:41] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 01:12 input.tar.gz
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas         0 Nov 27 01:12 boinc_lockfile
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas      2785 Nov 27 01:12 pandaJob.out
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas        57 Nov 27 01:12 setup.sh.local
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas    991578 Nov 27 01:12 agis_schedconf.cvmfs.json
[2025-11-27 12:24:41] drwx------ 5 boincer umatlas      4096 Nov 27 01:12 pilot3
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas       533 Nov 27 12:13 boinc_task_state.xml
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 12:18 init_data.xml
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas 908813902 Nov 27 12:23 HITS.47556161._004670.pool.root.1
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas      1061 Nov 27 12:23 memory_monitor_summary.json
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas   1516240 Nov 27 12:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas   1924820 Nov 27 12:23 log.47556161._004670.job.log.tgz.1
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas      8674 Nov 27 12:23 heartbeat.json
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas        95 Nov 27 12:24 pilot_heartbeat.json
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas      4932 Nov 27 12:24 pilotlog.txt
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 12:24 boinc_mmap_file
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas        29 Nov 27 12:24 wrapper_checkpoint.txt
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas   5547742 Nov 27 12:24 log.47556161._004670.job.log.1
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas       353 Nov 27 12:24 output.list
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas       620 Nov 27 12:24 runtime_log
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas   7495680 Nov 27 12:24 result.tar.gz
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas       667 Nov 27 12:24 ufwKDmyGMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZvJKDmvrsDPn.diag
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 12:24 runtime_log.err
[2025-11-27 12:24:41] -rw-r--r-- 1 boincer umatlas     21300 Nov 27 12:24 stderr.txt
[2025-11-27 12:24:41] HITS file was successfully produced:
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas 908813902 Nov 27 12:23 shared/HITS.pool.root.1
[2025-11-27 12:24:41]  *** Contents of shared directory: ***
[2025-11-27 12:24:41] total 1292492
[2025-11-27 12:24:41] -rw-r--r-- 2 boincer umatlas 406577273 Nov 27 01:12 ATLAS.root_0
[2025-11-27 12:24:41] -rw-r--r-- 2 boincer umatlas     15847 Nov 27 01:12 start_atlas.sh
[2025-11-27 12:24:41] -rw-r--r-- 2 boincer umatlas    590108 Nov 27 01:12 input.tar.gz
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas 908813902 Nov 27 12:23 HITS.pool.root.1
[2025-11-27 12:24:41] -rw------- 1 boincer umatlas   7495680 Nov 27 12:24 result.tar.gz
12:24:43 (17313): run_atlas exited; CPU time 311614.930593
12:24:43 (17313): called boinc_finish(0)

</stderr_txt>
]]>

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