Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:23:54 (3844585): wrapper (7.7.26015): starting
21:23:54 (3844585): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:23:54] Arguments: --nthreads 8
[2025-11-26 21:23:54] Threads: 8
[2025-11-26 21:23:54] Checking for CVMFS
[2025-11-26 21:23:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:23:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:23:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:23:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:23:55] 2.11.3.0 2562703 29401 206952 153348 3 291 29078744 45568000 15570 130560 0 205978612 99.783 124865387 20635 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 21:23:55] CVMFS is ok
[2025-11-26 21:23:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:23:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:23:55] Further information can be found at the LHC@home message board.
[2025-11-26 21:23:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:23:55] Checking for apptainer binary...
[2025-11-26 21:23:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:23:55] Running /usr/bin/apptainer --version
[2025-11-26 21:23:55] apptainer version 1.4.1-1.el9
[2025-11-26 21:23:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:23:55] wns0015.triumf.lcg
[2025-11-26 21:23:55] apptainer works
[2025-11-26 21:23:55] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:23:55] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:23:55] Starting ATLAS job with PandaID=6891586335
[2025-11-26 21:23:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:28:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:28:18] 2025-11-27 05:28:00,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 21:28:18] 2025-11-27 05:28:00,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 21:28:18] 2025-11-27 05:28:00,942 | WARNING  | wrong length of table data, x=[1764221084.0, 1764221145.0], y=[926.0, 633519.0] (must be same and length>=4)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,942 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | ..............................
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . Timing measurements:
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . get job = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . initial setup = 3 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . payload setup = 7 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . stage-in = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . payload execution = 74 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . stage-out = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . log creation = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | ..............................
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 21:28:18] 2025-11-27 05:28:00,944 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891586335/pilotlog.txt
[2025-11-26 21:28:18] 2025-11-27 05:28:00,954 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 21:28:18] - Log from pilotlog.txt -
[2025-11-26 21:28:18] 2025-11-27 05:28:00,939 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891586335/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,940 | INFO     | extracted standard info from prmon json
[2025-11-26 21:28:18] 2025-11-27 05:28:00,940 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:28:18] 2025-11-27 05:28:00,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:28:18] 2025-11-27 05:28:00,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 21:28:18] 2025-11-27 05:28:00,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 21:28:18] 2025-11-27 05:28:00,942 | WARNING  | wrong length of table data, x=[1764221084.0, 1764221145.0], y=[926.0, 633519.0] (must be same and length>=4)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,942 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | ..............................
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . Timing measurements:
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . get job = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . initial setup = 3 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . payload setup = 7 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . stage-in = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . payload execution = 74 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . stage-out = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . log creation = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | ..............................
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 21:28:18] 2025-11-27 05:28:00,944 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891586335/pilotlog.txt
[2025-11-26 21:28:18] 2025-11-27 05:28:00,954 | WARNING  | 
[2025-11-26 21:28:18] [begin log extracts]
[2025-11-26 21:28:18] - Log from pilotlog.txt -
[2025-11-26 21:28:18] 2025-11-27 05:28:00,939 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6891586335/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,940 | INFO     | extracted standard info from prmon json
[2025-11-26 21:28:18] 2025-11-27 05:28:00,940 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:28:18] 2025-11-27 05:28:00,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:28:18] 2025-11-27 05:28:00,941 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 21:28:18] 2025-11-27 05:28:00,941 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 21:28:18] 2025-11-27 05:28:00,942 | WARNING  | wrong length of table data, x=[1764221084.0, 1764221145.0], y=[926.0, 633519.0] (must be same and length>=4)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,942 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | ..............................
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . Timing measurements:
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . get job = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . initial setup = 3 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . payload setup = 7 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . stage-in = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . payload execution = 74 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . stage-out = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | . log creation = 0 s
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | ..............................
[2025-11-26 21:28:18] 2025-11-27 05:28:00,943 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 21:28:18] 2025-11-27 05:28:00,944 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6891586335/pilotlog.txt
[2025-11-26 21:28:18] [end log extracts]
[2025-11-26 21:28:18] 2025-11-27 05:28:00,954 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 21:28:18] 2025-11-27 05:28:00,955 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | 
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | job summary report
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | --------------------------------------------------
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | PanDA job id: 6891586335
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | task id: 47493068
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 21:25:46,268 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 21:28:18] 2025-11-27 05:28:01,023 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | pilot state: failed 
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | transexitcode: 65
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | exeerrorcode: 65
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | exitcode: 65
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | cpuconsumptiontime: 47 s
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | nevents: 0
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | neventsw: 0
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | pid: 3855764
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | pgrp: 3855764
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | corecount: 8
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | event service: False
[2025-11-26 21:28:18] 2025-11-27 05:28:01,024 | INFO     | sizes: {0: 2284300, 7: 2284562, 11: 2284590, 86: 2309999, 87: 2314289, 88: 2314317, 212: 2314611}
[2025-11-26 21:28:18] 2025-11-27 05:28:01,025 | INFO     | --------------------------------------------------
[2025-11-26 21:28:18] 2025-11-27 05:28:01,025 | INFO     | 
[2025-11-26 21:28:18] 2025-11-27 05:28:01,025 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 21:28:18] 2025-11-27 05:28:01,038 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,039 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | job 6891586335 has completed (purged errors)
[2025-11-26 21:28:18] 2025-11-27 05:28:01,040 | INFO     | overall cleanup function is called
[2025-11-26 21:28:18] 2025-11-27 05:28:02,049 | INFO     | --- collectZombieJob: --- 10, [3855764]
[2025-11-26 21:28:18] 2025-11-27 05:28:02,049 | INFO     | zombie collector waiting for pid 3855764
[2025-11-26 21:28:18] 2025-11-27 05:28:02,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:28:18] 2025-11-27 05:28:02,049 | INFO     | collected zombie processes
[2025-11-26 21:28:18] 2025-11-27 05:28:02,050 | INFO     | will attempt to kill all subprocesses of pid=3855764
[2025-11-26 21:28:18] 2025-11-27 05:28:02,239 | INFO     | process IDs to be killed: [3855764] (in reverse order)
[2025-11-26 21:28:18] 2025-11-27 05:28:02,294 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:28:18] 2025-11-27 05:28:02,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:28:18] 2025-11-27 05:28:02,300 | INFO     | did not find any defunct processes belonging to 3855764
[2025-11-26 21:28:18] 2025-11-27 05:28:02,306 | INFO     | did not find any defunct processes belonging to 3855764
[2025-11-26 21:28:18] 2025-11-27 05:28:02,308 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:28:18] 2025-11-27 05:28:02,308 | INFO     | ready for new job
[2025-11-26 21:28:18] 2025-11-27 05:28:02,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:28:18] 2025-11-27 05:28:02,309 | INFO     | ***************************************
[2025-11-26 21:28:18] 2025-11-27 05:28:02,310 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:28:18] 2025-11-27 05:28:02,310 | INFO     | ***************************************
[2025-11-26 21:28:18] 2025-11-27 05:28:02,310 | INFO     | 
[2025-11-26 21:28:18] 2025-11-27 05:28:02,313 | INFO     | architecture information:
[2025-11-26 21:28:18] 2025-11-27 05:28:02,313 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:28:18] 2025-11-27 05:28:02,332 | INFO     | cat /etc/os-release:
[2025-11-26 21:28:18] NAME="CentOS Linux"
[2025-11-26 21:28:18] VERSION="7 (Core)"
[2025-11-26 21:28:18] ID="centos"
[2025-11-26 21:28:18] ID_LIKE="rhel fedora"
[2025-11-26 21:28:18] VERSION_ID="7"
[2025-11-26 21:28:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:28:18] ANSI_COLOR="0;31"
[2025-11-26 21:28:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:28:18] HOME_URL="https://www.centos.org/"
[2025-11-26 21:28:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:28:18] 
[2025-11-26 21:28:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:28:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:28:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:28:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:28:18] 
[2025-11-26 21:28:18] 2025-11-27 05:28:02,332 | INFO     | ***************************************
[2025-11-26 21:28:18] 2025-11-27 05:28:02,849 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 21:28:18] 2025-11-27 05:28:02,897 | INFO     | sufficient remaining disk space (1233950605312 B)
[2025-11-26 21:28:18] 2025-11-27 05:28:02,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:28:18] 2025-11-27 05:28:02,898 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:28:18] 2025-11-27 05:28:02,898 | INFO     | update_server=False
[2025-11-26 21:28:18] 2025-11-27 05:28:02,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:28:18] 2025-11-27 05:28:02,899 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 21:28:18] 2025-11-27 05:28:02,900 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:28:18] 2025-11-27 05:28:02,900 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:28:18] 2025-11-27 05:28:02,900 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:28:18] 2025-11-27 05:28:02,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:28:18] 2025-11-27 05:28:03,079 | INFO     | all data control threads have been joined
[2025-11-26 21:28:18] 2025-11-27 05:28:03,487 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:28:18] 2025-11-27 05:28:03,487 | INFO     | aborting loop
[2025-11-26 21:28:18] 2025-11-27 05:28:03,904 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:03,915 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:04,016 | INFO     | all payload control threads have been joined
[2025-11-26 21:28:18] 2025-11-27 05:28:04,101 | INFO     | [data] control thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:04,134 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:28:18] 2025-11-27 05:28:04,369 | INFO     | all job control threads have been joined
[2025-11-26 21:28:18] 2025-11-27 05:28:04,492 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:04,644 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:04,890 | INFO     | [job] validate thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:04,911 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,022 | INFO     | [payload] control thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,105 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,188 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,341 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,375 | INFO     | [job] control thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,381 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:05,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:28:18] 2025-11-27 05:28:05,426 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:06,138 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:09,410 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:28:18] 2025-11-27 05:28:11,680 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:28:18] 2025-11-27 05:28:13,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139905033144128)>', '<ExcThread(monitor, started 139904491169536)>']
[2025-11-26 21:28:18] 2025-11-27 05:28:13,974 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:28:18] 2025-11-27 05:28:13,974 | INFO     | [monitor] control thread has ended
[2025-11-26 21:28:18] 2025-11-27 05:28:18,394 | INFO     | all workflow threads have been joined
[2025-11-26 21:28:18] 2025-11-27 05:28:18,394 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:28:18] 2025-11-27 05:28:18,395 | INFO     | traces error code: 0
[2025-11-26 21:28:18] 2025-11-27 05:28:18,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:28:18] 2025-11-27 05:28:18,619 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:28:18] 2025-11-27 05:28:18,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:28:18] 2025-11-27 05:28:18,696 [wrapper] pilotpid: 3848811
[2025-11-26 21:28:18] 2025-11-27 05:28:18,698 [wrapper] Pilot exit status: 0
[2025-11-26 21:28:18] 2025-11-27 05:28:18,716 [wrapper] pandaids: 6891586335
[2025-11-26 21:28:18] 2025-11-27 05:28:18,759 [wrapper] cleanup supervisor_pilot 3848817 3848812
[2025-11-26 21:28:18] 2025-11-27 05:28:18,766 [wrapper] Test setup, not cleaning
[2025-11-26 21:28:18] 2025-11-27 05:28:18,768 [wrapper] apfmon messages muted
[2025-11-26 21:28:18] 2025-11-27 05:28:18,770 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:28:18] 2025-11-27 05:28:18,772 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:28:18]  *** Error codes and diagnostics ***
[2025-11-26 21:28:18]     "exeErrorCode": 65,
[2025-11-26 21:28:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 21:28:18]     "pilotErrorCode": 1305,
[2025-11-26 21:28:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 21:28:18]  *** Listing of results directory ***
[2025-11-26 21:28:18] total 404380
[2025-11-26 21:28:18] -rwx------. 1 boinc boinc     36292 Nov 18 09:24 runpilot2-wrapper.sh
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc      5112 Nov 18 09:24 queuedata.json
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc    576529 Nov 18 09:24 pilot3.tar.gz
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc       100 Nov 26 21:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:28:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 21:23 run_atlas
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc       105 Nov 26 21:23 job.xml
[2025-11-26 21:28:18] -rw-r--r--. 2 boinc boinc 409886522 Nov 26 21:23 EVNT.47493065._000483.pool.root.1
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc      6446 Nov 26 21:23 init_data.xml
[2025-11-26 21:28:18] -rw-r--r--. 2 boinc boinc     15120 Nov 26 21:23 start_atlas.sh
[2025-11-26 21:28:18] drwxrwx--x. 2 boinc boinc      4096 Nov 26 21:23 shared
[2025-11-26 21:28:18] -rw-r--r--. 2 boinc boinc    590087 Nov 26 21:23 input.tar.gz
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc         0 Nov 26 21:23 boinc_lockfile
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc      2772 Nov 26 21:23 pandaJob.out
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc    991570 Nov 26 21:24 agis_schedconf.cvmfs.json
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc   1516240 Nov 26 21:24 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:28:18] drwx------. 5 boinc boinc      4096 Nov 26 21:24 pilot3
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc       524 Nov 26 21:25 boinc_task_state.xml
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc       991 Nov 26 21:25 memory_monitor_summary.json
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc     48050 Nov 26 21:25 log.47493068._004825.job.log.tgz.1
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc        95 Nov 26 21:27 pilot_heartbeat.json
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc     10329 Nov 26 21:28 heartbeat.json
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc      8192 Nov 26 21:28 boinc_mmap_file
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc        23 Nov 26 21:28 wrapper_checkpoint.txt
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc      4551 Nov 26 21:28 pilotlog.txt
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc     96102 Nov 26 21:28 log.47493068._004825.job.log.1
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc       186 Nov 26 21:28 output.list
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc       620 Nov 26 21:28 runtime_log
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc    163840 Nov 26 21:28 result.tar.gz
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc       647 Nov 26 21:28 YOqMDmTcef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmf1FKDmtLWTpm.diag
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc      8526 Nov 26 21:28 runtime_log.err
[2025-11-26 21:28:18] -rw-r--r--. 1 boinc boinc     22382 Nov 26 21:28 stderr.txt
[2025-11-26 21:28:18] No HITS result produced
[2025-11-26 21:28:18]  *** Contents of shared directory: ***
[2025-11-26 21:28:18] total 401040
[2025-11-26 21:28:18] -rw-r--r--. 2 boinc boinc 409886522 Nov 26 21:23 ATLAS.root_0
[2025-11-26 21:28:18] -rw-r--r--. 2 boinc boinc     15120 Nov 26 21:23 start_atlas.sh
[2025-11-26 21:28:18] -rw-r--r--. 2 boinc boinc    590087 Nov 26 21:23 input.tar.gz
[2025-11-26 21:28:18] -rw-------. 1 boinc boinc    163840 Nov 26 21:28 result.tar.gz
21:28:20 (3844585): run_atlas exited; CPU time 48.536721
21:28:20 (3844585): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN