Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:14:20 (1031977): wrapper (7.7.26015): starting
00:14:20 (1031977): wrapper: running run_atlas (--nthreads 10)
[2025-11-27 00:14:20] Arguments: --nthreads 10
[2025-11-27 00:14:20] Threads: 10
[2025-11-27 00:14:20] Checking for CVMFS
[2025-11-27 00:14:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:14:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:14:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:14:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:14:21] 2.13.2.0 8790 36845 258664 153348 2 60 20801843 40960000 10563 16776704 0 36823867 99.658 31634470 39215 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:14:21] CVMFS is ok
[2025-11-27 00:14:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:14:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:14:21] Further information can be found at the LHC@home message board.
[2025-11-27 00:14:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:14:21] Checking for apptainer binary...
[2025-11-27 00:14:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:14:21] Running /usr/bin/apptainer --version
[2025-11-27 00:14:21] apptainer version 1.4.4-1.el9
[2025-11-27 00:14:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:14:22] c-210-33-1.aglt2.org
[2025-11-27 00:14:22] apptainer works
[2025-11-27 00:14:22] Set ATHENA_PROC_NUMBER=10
[2025-11-27 00:14:22] Set ATHENA_CORE_NUMBER=10
[2025-11-27 00:14:22] Starting ATLAS job with PandaID=6898177503
[2025-11-27 00:14:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:47:44]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:47:44] 2025-11-27 18:46:41,270 | INFO     | time since job start (48687s) is within the limit (172800.0s)
[2025-11-27 13:47:44] 2025-11-27 18:46:41,961 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 13:47:44] 2025-11-27 18:46:41,977 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2769.532625
[2025-11-27 13:47:44] 2025-11-27 18:46:41,987 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898177503/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:47:44] 2025-11-27 18:46:41,988 | INFO     | extracted standard info from prmon json
[2025-11-27 13:47:44] 2025-11-27 18:46:41,988 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:47:44] 2025-11-27 18:46:41,988 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:47:44] 2025-11-27 18:46:42,001 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:47:44] 2025-11-27 18:46:42,002 | INFO     | sum of square deviations: 156400636209.08975
[2025-11-27 13:47:44] 2025-11-27 18:46:42,021 | INFO     | sum of deviations: 1951708158368.4324
[2025-11-27 13:47:44] 2025-11-27 18:46:42,022 | INFO     | mean x: 1764244894.548995
[2025-11-27 13:47:44] 2025-11-27 18:46:42,022 | INFO     | mean y: 3207086.040201005
[2025-11-27 13:47:44] 2025-11-27 18:46:42,022 | INFO     | intersect: -22012631452.160133
[2025-11-27 13:47:44] 2025-11-27 18:46:42,023 | INFO     | chi2: 8.692331967455916
[2025-11-27 13:47:44] 2025-11-27 18:46:42,024 | INFO     | sum of square deviations: 153472744742.31335
[2025-11-27 13:47:44] 2025-11-27 18:46:42,041 | INFO     | sum of deviations: 2248381414159.1387
[2025-11-27 13:47:44] 2025-11-27 18:46:42,041 | INFO     | mean x: 1764244742.068268
[2025-11-27 13:47:44] 2025-11-27 18:46:42,041 | INFO     | mean y: 3222528.6270543616
[2025-11-27 13:47:44] 2025-11-27 18:46:42,041 | INFO     | intersect: -25843028509.33093
[2025-11-27 13:47:44] 2025-11-27 18:46:42,042 | INFO     | chi2: 5.45916293333096
[2025-11-27 13:47:44] 2025-11-27 18:46:42,042 | INFO     | current chi2=5.45916293333096 (change=37.19564607322797 %)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,043 | INFO     | sum of square deviations: 150580970998.6516
[2025-11-27 13:47:44] 2025-11-27 18:46:42,054 | INFO     | sum of deviations: 2314188201695.4478
[2025-11-27 13:47:44] 2025-11-27 18:46:42,055 | INFO     | mean x: 1764244589.5699747
[2025-11-27 13:47:44] 2025-11-27 18:46:42,055 | INFO     | mean y: 3225986.3918575062
[2025-11-27 13:47:44] 2025-11-27 18:46:42,055 | INFO     | intersect: -27110385959.46565
[2025-11-27 13:47:44] 2025-11-27 18:46:42,056 | INFO     | chi2: 5.0330082872739625
[2025-11-27 13:47:44] 2025-11-27 18:46:42,056 | INFO     | current chi2=5.0330082872739625 (change=7.806226911732332 %)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,056 | INFO     | right removable region: 785
[2025-11-27 13:47:44] 2025-11-27 18:46:42,057 | INFO     | sum of square deviations: 153471264272.31345
[2025-11-27 13:47:44] 2025-11-27 18:46:42,068 | INFO     | sum of deviations: 1614874717116.933
[2025-11-27 13:47:44] 2025-11-27 18:46:42,069 | INFO     | mean x: 1764245047.068268
[2025-11-27 13:47:44] 2025-11-27 18:46:42,069 | INFO     | mean y: 3224618.3160556257
[2025-11-27 13:47:44] 2025-11-27 18:46:42,069 | INFO     | intersect: -18560737402.965683
[2025-11-27 13:47:44] 2025-11-27 18:46:42,070 | INFO     | chi2: 4.976953047307102
[2025-11-27 13:47:44] 2025-11-27 18:46:42,070 | INFO     | current chi2=4.976953047307102 (change=42.74317794188245 %)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,071 | INFO     | sum of square deviations: 150578972149.45032
[2025-11-27 13:47:44] 2025-11-27 18:46:42,082 | INFO     | sum of deviations: 1436698213877.1838
[2025-11-27 13:47:44] 2025-11-27 18:46:42,082 | INFO     | mean x: 1764245199.5801528
[2025-11-27 13:47:44] 2025-11-27 18:46:42,083 | INFO     | mean y: 3233998.973282443
[2025-11-27 13:47:44] 2025-11-27 18:46:42,083 | INFO     | intersect: -16829713463.056889
[2025-11-27 13:47:44] 2025-11-27 18:46:42,084 | INFO     | chi2: 3.894286281734175
[2025-11-27 13:47:44] 2025-11-27 18:46:42,084 | INFO     | current chi2=3.894286281734175 (change=21.753606177955202 %)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,084 | INFO     | left removable region: 20
[2025-11-27 13:47:44] 2025-11-27 18:46:42,085 | INFO     | sum of square deviations: 138830991647.47714
[2025-11-27 13:47:44] 2025-11-27 18:46:42,095 | INFO     | sum of deviations: 1680717714840.157
[2025-11-27 13:47:44] 2025-11-27 18:46:42,096 | INFO     | mean x: 1764245169.0849674
[2025-11-27 13:47:44] 2025-11-27 18:46:42,096 | INFO     | mean y: 3259562.074509804
[2025-11-27 13:47:44] 2025-11-27 18:46:42,096 | INFO     | intersect: -21355070259.062057
[2025-11-27 13:47:44] 2025-11-27 18:46:42,097 | INFO     | chi2: 0.10927265433552796
[2025-11-27 13:47:44] 2025-11-27 18:46:42,097 | INFO     | current memory leak: 12.11 B/s (using 765 data points, chi2=0.11)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | could have reported an average CPU frequency of 2831 MHz (30 samples)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | ..............................
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | . Timing measurements:
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | . get job = 0 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | . initial setup = 4 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | . payload setup = 44 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | . stage-in = 0 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,098 | INFO     | . payload execution = 48557 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,099 | INFO     | . stage-out = 5 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,099 | INFO     | . log creation = 1 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,099 | INFO     | ..............................
[2025-11-27 13:47:44] 2025-11-27 18:46:42,446 | INFO     | 
[2025-11-27 13:47:44] 2025-11-27 18:46:42,446 | INFO     | job summary report
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | --------------------------------------------------
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | PanDA job id: 6898177503
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | task id: 47556161
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | errors: (none)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | pilot state: finished 
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | transexitcode: 0
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | exeerrorcode: 0
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | exeerrordiag: 
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | exitcode: 0
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | exitmsg: OK
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | cpuconsumptiontime: 239565 s
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | nevents: 1000
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | neventsw: 0
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | pid: 1042509
[2025-11-27 13:47:44] 2025-11-27 18:46:42,447 | INFO     | pgrp: 1042509
[2025-11-27 13:47:44] 2025-11-27 18:46:42,448 | INFO     | corecount: 10
[2025-11-27 13:47:44] 2025-11-27 18:46:42,448 | INFO     | event service: False
[2025-11-27 13:47:44] 2025-11-27 18:46:42,448 | INFO     | sizes: {0: 2283436, 1: 2284121, 2: 2284320, 13: 2284320, 24: 2284376, 27: 2284666, 35: 2284822, 48606: 2332103, 48612: 2341097, 48613: 2341153, 48629: 2341399}
[2025-11-27 13:47:44] 2025-11-27 18:46:42,448 | INFO     | --------------------------------------------------
[2025-11-27 13:47:44] 2025-11-27 18:46:42,448 | INFO     | 
[2025-11-27 13:47:44] 2025-11-27 18:46:42,448 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,493 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:47:44] 2025-11-27 18:46:42,494 | INFO     | job 6898177503 has completed (purged errors)
[2025-11-27 13:47:44] 2025-11-27 18:46:42,494 | INFO     | overall cleanup function is called
[2025-11-27 13:47:44] 2025-11-27 18:46:43,524 | INFO     | --- collectZombieJob: --- 10, [1042509]
[2025-11-27 13:47:44] 2025-11-27 18:46:43,524 | INFO     | zombie collector waiting for pid 1042509
[2025-11-27 13:47:44] 2025-11-27 18:46:43,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:47:44] 2025-11-27 18:46:43,525 | INFO     | collected zombie processes
[2025-11-27 13:47:44] 2025-11-27 18:46:43,525 | INFO     | will attempt to kill all subprocesses of pid=1042509
[2025-11-27 13:47:44] 2025-11-27 18:46:43,890 | INFO     | process IDs to be killed: [1042509] (in reverse order)
[2025-11-27 13:47:44] 2025-11-27 18:46:43,993 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:47:44] 2025-11-27 18:46:43,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:47:44] 2025-11-27 18:46:44,018 | INFO     | did not find any defunct processes belonging to 1042509
[2025-11-27 13:47:44] 2025-11-27 18:46:44,030 | INFO     | did not find any defunct processes belonging to 1042509
[2025-11-27 13:47:44] 2025-11-27 18:46:44,032 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:47:44] 2025-11-27 18:46:44,032 | INFO     | ready for new job
[2025-11-27 13:47:44] 2025-11-27 18:46:44,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:47:44] 2025-11-27 18:46:44,037 | INFO     | ***************************************
[2025-11-27 13:47:44] 2025-11-27 18:46:44,038 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:47:44] 2025-11-27 18:46:44,038 | INFO     | ***************************************
[2025-11-27 13:47:44] 2025-11-27 18:46:44,038 | INFO     | 
[2025-11-27 13:47:44] 2025-11-27 18:46:44,042 | INFO     | architecture information:
[2025-11-27 13:47:44] 2025-11-27 18:46:44,043 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:47:44] 2025-11-27 18:46:44,096 | INFO     | cat /etc/os-release:
[2025-11-27 13:47:44] NAME="CentOS Linux"
[2025-11-27 13:47:44] VERSION="7 (Core)"
[2025-11-27 13:47:44] ID="centos"
[2025-11-27 13:47:44] ID_LIKE="rhel fedora"
[2025-11-27 13:47:44] VERSION_ID="7"
[2025-11-27 13:47:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:47:44] ANSI_COLOR="0;31"
[2025-11-27 13:47:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:47:44] HOME_URL="https://www.centos.org/"
[2025-11-27 13:47:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:47:44] 
[2025-11-27 13:47:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:47:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:47:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:47:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:47:44] 
[2025-11-27 13:47:44] 2025-11-27 18:46:44,097 | INFO     | ***************************************
[2025-11-27 13:47:44] 2025-11-27 18:46:44,602 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 13:47:44] 2025-11-27 18:46:44,646 | INFO     | sufficient remaining disk space (67660414976 B)
[2025-11-27 13:47:44] 2025-11-27 18:46:44,646 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:47:44] 2025-11-27 18:46:44,646 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:47:44] 2025-11-27 18:46:44,646 | INFO     | update_server=False
[2025-11-27 13:47:44] 2025-11-27 18:46:44,646 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:47:44] 2025-11-27 18:46:44,674 | INFO     | all data control threads have been joined
[2025-11-27 13:47:44] 2025-11-27 18:46:45,065 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 13:47:44] 2025-11-27 18:46:45,065 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 13:47:44] 2025-11-27 18:46:45,066 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:47:44] 2025-11-27 18:46:45,066 | INFO     | will abort loop
[2025-11-27 13:47:44] 2025-11-27 18:46:45,180 | INFO     | all job control threads have been joined
[2025-11-27 13:47:44] 2025-11-27 18:46:45,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:47:44] 2025-11-27 18:46:45,652 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:45,680 | INFO     | [data] control thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:45,886 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:45,957 | INFO     | [job] validate thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,070 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,092 | INFO     | all payload control threads have been joined
[2025-11-27 13:47:44] 2025-11-27 18:46:46,118 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:47:44] 2025-11-27 18:46:46,130 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,185 | INFO     | [job] control thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,572 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,695 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,713 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:46,795 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:47,098 | INFO     | [payload] control thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:47,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:47,207 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:47:44] 2025-11-27 18:46:47,326 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:48,213 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:46:50,127 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:47:44] 2025-11-27 18:47:14,926 | INFO     | PID=1035911 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:47:44] 2025-11-27 18:47:14,926 | INFO     | .. there are 12 such processes running
[2025-11-27 13:47:44] 2025-11-27 18:47:14,926 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:47:44] 2025-11-27 18:47:14,926 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:47:44] 2025-11-27 18:47:14,926 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:47:44] 2025-11-27 18:47:37,861 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:47:44] 2025-11-27 18:47:38,966 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139662707435328)>', '<ExcThread(monitor, started 139661984913152)>']
[2025-11-27 13:47:44] 2025-11-27 18:47:39,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:47:44] 2025-11-27 18:47:39,086 | INFO     | [monitor] control thread has ended
[2025-11-27 13:47:44] 2025-11-27 18:47:43,992 | INFO     | all workflow threads have been joined
[2025-11-27 13:47:44] 2025-11-27 18:47:43,992 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:47:44] 2025-11-27 18:47:43,993 | INFO     | traces error code: 0
[2025-11-27 13:47:44] 2025-11-27 18:47:43,993 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:47:44] 2025-11-27 18:47:44,199 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:47:44] 2025-11-27 18:47:44,201 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:47:44] 2025-11-27 18:47:44,204 [wrapper] pilotpid: 1035911
[2025-11-27 13:47:44] 2025-11-27 18:47:44,206 [wrapper] Pilot exit status: 0
[2025-11-27 13:47:44] 2025-11-27 18:47:44,281 [wrapper] pandaids: 6898177503
[2025-11-27 13:47:44] 2025-11-27 18:47:44,408 [wrapper] cleanup supervisor_pilot 3004584 1035912
[2025-11-27 13:47:44] 2025-11-27 18:47:44,413 [wrapper] Test setup, not cleaning
[2025-11-27 13:47:44] 2025-11-27 18:47:44,416 [wrapper] apfmon messages muted
[2025-11-27 13:47:44] 2025-11-27 18:47:44,419 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:47:44] 2025-11-27 18:47:44,421 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:47:44]  *** Error codes and diagnostics ***
[2025-11-27 13:47:44]     "exeErrorCode": 0,
[2025-11-27 13:47:44]     "exeErrorDiag": "",
[2025-11-27 13:47:44]     "pilotErrorCode": 0,
[2025-11-27 13:47:44]     "pilotErrorDiag": "",
[2025-11-27 13:47:44]  *** Listing of results directory ***
[2025-11-27 13:47:44] total 1320592
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:06 queuedata.json
[2025-11-27 13:47:44] -rwx------. 1 boincer umatlas     36292 Nov 25 23:06 runpilot2-wrapper.sh
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:47:44] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:14 run_atlas
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:14 job.xml
[2025-11-27 13:47:44] -rw-r--r--. 2 boincer umatlas 410325892 Nov 27 00:14 EVNT.47483658._002469.pool.root.1
[2025-11-27 13:47:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:14 start_atlas.sh
[2025-11-27 13:47:44] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:14 shared
[2025-11-27 13:47:44] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:14 input.tar.gz
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:14 boinc_lockfile
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:14 pandaJob.out
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas        57 Nov 27 00:14 setup.sh.local
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas    991570 Nov 27 00:15 agis_schedconf.cvmfs.json
[2025-11-27 13:47:44] drwx------. 5 boincer umatlas      4096 Nov 27 00:15 pilot3
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:37 boinc_task_state.xml
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas 920430319 Nov 27 13:45 HITS.47556161._004515.pool.root.1
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 13:46 init_data.xml
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas      1056 Nov 27 13:46 memory_monitor_summary.json
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas        95 Nov 27 13:46 pilot_heartbeat.json
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas   2243031 Nov 27 13:46 log.47556161._004515.job.log.tgz.1
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas      7956 Nov 27 13:46 heartbeat.json
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:47 boinc_mmap_file
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas        29 Nov 27 13:47 wrapper_checkpoint.txt
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas      5010 Nov 27 13:47 pilotlog.txt
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas   6560417 Nov 27 13:47 log.47556161._004515.job.log.1
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas       353 Nov 27 13:47 output.list
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:47 runtime_log
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas   8826880 Nov 27 13:47 result.tar.gz
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas      9355 Nov 27 13:47 runtime_log.err
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas       662 Nov 27 13:47 5j1KDmuyLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6uMKDmpeVAIn.diag
[2025-11-27 13:47:44] -rw-r--r--. 1 boincer umatlas     21353 Nov 27 13:47 stderr.txt
[2025-11-27 13:47:44] HITS file was successfully produced:
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas 920430319 Nov 27 13:45 shared/HITS.pool.root.1
[2025-11-27 13:47:44]  *** Contents of shared directory: ***
[2025-11-27 13:47:44] total 1308796
[2025-11-27 13:47:44] -rw-r--r--. 2 boincer umatlas 410325892 Nov 27 00:14 ATLAS.root_0
[2025-11-27 13:47:44] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:14 start_atlas.sh
[2025-11-27 13:47:44] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:14 input.tar.gz
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas 920430319 Nov 27 13:45 HITS.pool.root.1
[2025-11-27 13:47:44] -rw-------. 1 boincer umatlas   8826880 Nov 27 13:47 result.tar.gz
13:47:46 (1031977): run_atlas exited; CPU time 240160.343103
13:47:46 (1031977): called boinc_finish(0)

</stderr_txt>
]]>

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