Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:57:33 (2897950): wrapper (7.7.26015): starting
06:57:33 (2897950): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 06:57:33] Arguments: --nthreads 3
[2025-11-27 06:57:33] Threads: 3
[2025-11-27 06:57:33] Checking for CVMFS
[2025-11-27 06:57:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:57:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:57:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:57:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:57:34] 2.9.2.0 2210343 148 64248 153349 0 88 35900631 36864001 0 130560 0 2066043 99.999 6762 20125 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 06:57:34] CVMFS is ok
[2025-11-27 06:57:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:57:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:57:34] Further information can be found at the LHC@home message board.
[2025-11-27 06:57:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:57:34] Checking for apptainer binary...
[2025-11-27 06:57:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:57:34] Running /usr/bin/apptainer --version
[2025-11-27 06:57:34] apptainer version 1.4.1-1.1
[2025-11-27 06:57:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:57:34] thA335
[2025-11-27 06:57:34] apptainer works
[2025-11-27 06:57:34] Set ATHENA_PROC_NUMBER=3
[2025-11-27 06:57:34] Set ATHENA_CORE_NUMBER=3
[2025-11-27 06:57:34] Starting ATLAS job with PandaID=6898178747
[2025-11-27 06:57:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:01:52]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:01:52] 2025-11-27 06:00:56,981 | INFO     | 
[2025-11-27 07:01:52] 2025-11-27 06:00:56,982 | INFO     | architecture information:
[2025-11-27 07:01:52] 2025-11-27 06:00:56,982 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:01:52] 2025-11-27 06:00:56,992 | INFO     | cat /etc/os-release:
[2025-11-27 07:01:52] NAME="CentOS Linux"
[2025-11-27 07:01:52] VERSION="7 (Core)"
[2025-11-27 07:01:52] ID="centos"
[2025-11-27 07:01:52] ID_LIKE="rhel fedora"
[2025-11-27 07:01:52] VERSION_ID="7"
[2025-11-27 07:01:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:01:52] ANSI_COLOR="0;31"
[2025-11-27 07:01:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:01:52] HOME_URL="https://www.centos.org/"
[2025-11-27 07:01:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:01:52] 
[2025-11-27 07:01:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:01:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:01:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:01:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:01:52] 
[2025-11-27 07:01:52] 2025-11-27 06:00:56,993 | INFO     | ***************************************
[2025-11-27 07:01:52] 2025-11-27 06:00:57,496 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 07:01:52] 2025-11-27 06:00:57,510 | INFO     | sufficient remaining disk space (826104872960 B)
[2025-11-27 07:01:52] 2025-11-27 06:00:57,510 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:01:52] 2025-11-27 06:00:57,510 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:01:52] 2025-11-27 06:00:57,510 | INFO     | update_server=False
[2025-11-27 07:01:52] 2025-11-27 06:00:57,510 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:01:52] 2025-11-27 06:00:57,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:52] 2025-11-27 06:00:57,511 | INFO     | aborting loop
[2025-11-27 07:01:52] 2025-11-27 06:00:58,343 | INFO     | all data control threads have been joined
[2025-11-27 07:01:52] 2025-11-27 06:00:58,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:01:52] 2025-11-27 06:00:58,516 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:58,517 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:58,522 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:58,563 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:58,790 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:58,879 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:58,939 | INFO     | all payload control threads have been joined
[2025-11-27 07:01:52] 2025-11-27 06:00:59,130 | INFO     | all job control threads have been joined
[2025-11-27 07:01:52] 2025-11-27 06:00:59,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:01:52] 2025-11-27 06:00:59,349 | INFO     | [data] control thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:59,391 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:59,711 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:59,723 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:59,938 | INFO     | [job] validate thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:00:59,941 | INFO     | [payload] control thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:01:00,136 | INFO     | [job] control thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:01:00,355 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:01:00,438 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:01:52] 2025-11-27 06:01:01,439 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:01:03,150 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:01:52] 2025-11-27 06:01:27,021 | INFO     | PID=2901690 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:01:52] 2025-11-27 06:01:27,022 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:01:52] 2025-11-27 06:01:27,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:01:52] 2025-11-27 06:01:27,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:01:52] 2025-11-27 06:01:46,251 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:01:52] 2025-11-27 06:01:47,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375100254016)>', '<ExcThread(monitor, started 140374454544128)>']
[2025-11-27 07:01:52] 2025-11-27 06:01:48,131 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:01:52] 2025-11-27 06:01:48,132 | INFO     | [monitor] control thread has ended
[2025-11-27 07:01:52] 2025-11-27 06:01:52,223 | INFO     | all workflow threads have been joined
[2025-11-27 07:01:52] 2025-11-27 06:01:52,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:01:52] 2025-11-27 06:01:52,224 | INFO     | traces error code: 0
[2025-11-27 07:01:52] 2025-11-27 06:01:52,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:01:52] 2025-11-27 06:01:52,272 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:01:52] 2025-11-27 06:01:52,275 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:01:52] 2025-11-27 06:01:52,278 [wrapper] pilotpid: 2901690
[2025-11-27 07:01:52] 2025-11-27 06:01:52,280 [wrapper] Pilot exit status: 0
[2025-11-27 07:01:52] 2025-11-27 06:01:52,288 [wrapper] pandaids: 6898178747
[2025-11-27 07:01:52] 2025-11-27 06:01:52,306 [wrapper] cleanup supervisor_pilot 2901696 2901691
[2025-11-27 07:01:52] 2025-11-27 06:01:52,309 [wrapper] Test setup, not cleaning
[2025-11-27 07:01:52] 2025-11-27 06:01:52,312 [wrapper] apfmon messages muted
[2025-11-27 07:01:52] 2025-11-27 06:01:52,315 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:01:52] 2025-11-27 06:01:52,317 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:01:52]  *** Error codes and diagnostics ***
[2025-11-27 07:01:52]     "exeErrorCode": 65,
[2025-11-27 07:01:52]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 07:01:52]     "pilotErrorCode": 1305,
[2025-11-27 07:01:52]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-27 07:01:52]  *** Listing of results directory ***
[2025-11-27 07:01:52] total 404444
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc    576529 Nov 26 04:33 pilot3.tar.gz
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc      5112 Nov 26 05:15 queuedata.json
[2025-11-27 07:01:52] -rwx------ 1 boinc boinc     36292 Nov 26 05:19 runpilot2-wrapper.sh
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc       100 Nov 27 06:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:01:52] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 06:57 run_atlas
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc       105 Nov 27 06:57 job.xml
[2025-11-27 07:01:52] -rw-r--r-- 2 boinc boinc 409962214 Nov 27 06:57 EVNT.47483658._003176.pool.root.1
[2025-11-27 07:01:52] -rw-r--r-- 2 boinc boinc    590105 Nov 27 06:57 input.tar.gz
[2025-11-27 07:01:52] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:57 start_atlas.sh
[2025-11-27 07:01:52] drwxrwx--x 2 boinc boinc      4096 Nov 27 06:57 shared
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:57 boinc_setup_complete
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc      6196 Nov 27 06:57 init_data.xml
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc         0 Nov 27 06:57 boinc_lockfile
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc      2785 Nov 27 06:57 pandaJob.out
[2025-11-27 07:01:52] -rw------- 1 boinc boinc    991578 Nov 27 06:57 agis_schedconf.cvmfs.json
[2025-11-27 07:01:52] -rw------- 1 boinc boinc   1516240 Nov 27 06:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:01:52] drwx------ 5 boinc boinc      4096 Nov 27 06:57 pilot3
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc       522 Nov 27 06:58 boinc_task_state.xml
[2025-11-27 07:01:52] -rw------- 1 boinc boinc       953 Nov 27 06:58 memory_monitor_summary.json
[2025-11-27 07:01:52] -rw------- 1 boinc boinc     54142 Nov 27 06:58 log.47556173._001330.job.log.tgz.1
[2025-11-27 07:01:52] -rw------- 1 boinc boinc        95 Nov 27 07:00 pilot_heartbeat.json
[2025-11-27 07:01:52] -rw------- 1 boinc boinc      8385 Nov 27 07:00 heartbeat.json
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc        22 Nov 27 07:01 wrapper_checkpoint.txt
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc      8192 Nov 27 07:01 boinc_mmap_file
[2025-11-27 07:01:52] -rw------- 1 boinc boinc      4752 Nov 27 07:01 pilotlog.txt
[2025-11-27 07:01:52] -rw------- 1 boinc boinc     91585 Nov 27 07:01 log.47556173._001330.job.log.1
[2025-11-27 07:01:52] -rw------- 1 boinc boinc       186 Nov 27 07:01 output.list
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc       620 Nov 27 07:01 runtime_log
[2025-11-27 07:01:52] -rw------- 1 boinc boinc    163840 Nov 27 07:01 result.tar.gz
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc      8744 Nov 27 07:01 runtime_log.err
[2025-11-27 07:01:52] -rw------- 1 boinc boinc       649 Nov 27 07:01 XkUNDmwAMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3uJKDm3pYSDm.diag
[2025-11-27 07:01:52] -rw-r--r-- 1 boinc boinc      9404 Nov 27 07:01 stderr.txt
[2025-11-27 07:01:52] No HITS result produced
[2025-11-27 07:01:52]  *** Contents of shared directory: ***
[2025-11-27 07:01:52] total 401116
[2025-11-27 07:01:52] -rw-r--r-- 2 boinc boinc 409962214 Nov 27 06:57 ATLAS.root_0
[2025-11-27 07:01:52] -rw-r--r-- 2 boinc boinc    590105 Nov 27 06:57 input.tar.gz
[2025-11-27 07:01:52] -rw-r--r-- 2 boinc boinc     15847 Nov 27 06:57 start_atlas.sh
[2025-11-27 07:01:52] -rw------- 1 boinc boinc    163840 Nov 27 07:01 result.tar.gz
07:01:54 (2897950): run_atlas exited; CPU time 30.514865
07:01:54 (2897950): called boinc_finish(0)

</stderr_txt>
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