Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:51 (3462966): wrapper (7.7.26015): starting
00:09:51 (3462966): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:09:51] Arguments: --nthreads 8
[2025-11-27 00:09:51] Threads: 8
[2025-11-27 00:09:51] Checking for CVMFS
[2025-11-27 00:09:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:09:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:09:52] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:09:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:09:52] 2.13.2.0 1657905 31260 177324 153347 3 918 28034283 40960001 44537 16776704 0 385913219 99.695 296132529 48121 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:09:52] CVMFS is ok
[2025-11-27 00:09:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:09:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:09:52] Further information can be found at the LHC@home message board.
[2025-11-27 00:09:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:09:52] Checking for apptainer binary...
[2025-11-27 00:09:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:09:52] Running /usr/bin/apptainer --version
[2025-11-27 00:09:52] apptainer version 1.4.4-1.el9
[2025-11-27 00:09:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:09:52] c-208-39.aglt2.org
[2025-11-27 00:09:52] apptainer works
[2025-11-27 00:09:53] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:09:53] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:09:53] Starting ATLAS job with PandaID=6897487242
[2025-11-27 00:09:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:21:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:21:04] 2025-11-27 17:19:46,192 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:21:04] 2025-11-27 17:19:46,192 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:21:04] 2025-11-27 17:19:46,198 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:21:04] 2025-11-27 17:19:46,199 | INFO     | sum of square deviations: 113331814831.8394
[2025-11-27 12:21:04] 2025-11-27 17:19:46,206 | INFO     | sum of deviations: 281322781795.94855
[2025-11-27 12:21:04] 2025-11-27 17:19:46,206 | INFO     | mean x: 1764242151.227972
[2025-11-27 12:21:04] 2025-11-27 17:19:46,206 | INFO     | mean y: 2827812.2825174825
[2025-11-27 12:21:04] 2025-11-27 17:19:46,207 | INFO     | intersect: -4376538303.768465
[2025-11-27 12:21:04] 2025-11-27 17:19:46,207 | INFO     | chi2: 15.248401786617723
[2025-11-27 12:21:04] 2025-11-27 17:19:46,207 | INFO     | sum of square deviations: 110971056399.3469
[2025-11-27 12:21:04] 2025-11-27 17:19:46,214 | INFO     | sum of deviations: 537685696154.34644
[2025-11-27 12:21:04] 2025-11-27 17:19:46,214 | INFO     | mean x: 1764241998.7436619
[2025-11-27 12:21:04] 2025-11-27 17:19:46,214 | INFO     | mean y: 2844372.2436619718
[2025-11-27 12:21:04] 2025-11-27 17:19:46,214 | INFO     | intersect: -8545399810.144821
[2025-11-27 12:21:04] 2025-11-27 17:19:46,215 | INFO     | chi2: 11.307670834231542
[2025-11-27 12:21:04] 2025-11-27 17:19:46,215 | INFO     | current chi2=11.307670834231542 (change=25.843567132685596 %)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,215 | INFO     | sum of square deviations: 108643321841.49767
[2025-11-27 12:21:04] 2025-11-27 17:19:46,224 | INFO     | sum of deviations: 793618053569.762
[2025-11-27 12:21:04] 2025-11-27 17:19:46,225 | INFO     | mean x: 1764241846.2595744
[2025-11-27 12:21:04] 2025-11-27 17:19:46,225 | INFO     | mean y: 2861135.405673759
[2025-11-27 12:21:04] 2025-11-27 17:19:46,225 | INFO     | intersect: -12884577837.580956
[2025-11-27 12:21:04] 2025-11-27 17:19:46,225 | INFO     | chi2: 7.527711973414241
[2025-11-27 12:21:04] 2025-11-27 17:19:46,225 | INFO     | current chi2=7.527711973414241 (change=33.42827109340934 %)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,226 | INFO     | sum of square deviations: 106348378595.78714
[2025-11-27 12:21:04] 2025-11-27 17:19:46,232 | INFO     | sum of deviations: 1069168567886.1448
[2025-11-27 12:21:04] 2025-11-27 17:19:46,232 | INFO     | mean x: 1764241693.7757144
[2025-11-27 12:21:04] 2025-11-27 17:19:46,232 | INFO     | mean y: 2879446.5614285716
[2025-11-27 12:21:04] 2025-11-27 17:19:46,232 | INFO     | intersect: -17733843858.91198
[2025-11-27 12:21:04] 2025-11-27 17:19:46,233 | INFO     | chi2: 3.38401507141171
[2025-11-27 12:21:04] 2025-11-27 17:19:46,233 | INFO     | current chi2=3.38401507141171 (change=55.04590128629923 %)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,233 | INFO     | sum of square deviations: 104085909072.86906
[2025-11-27 12:21:04] 2025-11-27 17:19:46,239 | INFO     | sum of deviations: 1100387379489.733
[2025-11-27 12:21:04] 2025-11-27 17:19:46,239 | INFO     | mean x: 1764241541.2892087
[2025-11-27 12:21:04] 2025-11-27 17:19:46,239 | INFO     | mean y: 2881538.6978417267
[2025-11-27 12:21:04] 2025-11-27 17:19:46,239 | INFO     | intersect: -18648530008.729282
[2025-11-27 12:21:04] 2025-11-27 17:19:46,240 | INFO     | chi2: 3.1614325343131595
[2025-11-27 12:21:04] 2025-11-27 17:19:46,240 | INFO     | current chi2=3.1614325343131595 (change=6.577468846960419 %)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,240 | INFO     | right removable region: 694
[2025-11-27 12:21:04] 2025-11-27 17:19:46,240 | INFO     | sum of square deviations: 110970171416.31546
[2025-11-27 12:21:04] 2025-11-27 17:19:46,246 | INFO     | sum of deviations: 64497800224.03393
[2025-11-27 12:21:04] 2025-11-27 17:19:46,246 | INFO     | mean x: 1764242303.740845
[2025-11-27 12:21:04] 2025-11-27 17:19:46,247 | INFO     | mean y: 2841793.043661972
[2025-11-27 12:21:04] 2025-11-27 17:19:46,247 | INFO     | intersect: -1022566622.5797855
[2025-11-27 12:21:04] 2025-11-27 17:19:46,247 | INFO     | chi2: 12.510931521347644
[2025-11-27 12:21:04] 2025-11-27 17:19:46,247 | INFO     | current chi2=12.510931521347644 (change=17.952506128691688 %)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,247 | INFO     | left removable region: 10
[2025-11-27 12:21:04] 2025-11-27 17:19:46,248 | INFO     | sum of square deviations: 99220434727.4194
[2025-11-27 12:21:04] 2025-11-27 17:19:46,253 | INFO     | sum of deviations: 822540363893.8961
[2025-11-27 12:21:04] 2025-11-27 17:19:46,253 | INFO     | mean x: 1764241815.8143275
[2025-11-27 12:21:04] 2025-11-27 17:19:46,253 | INFO     | mean y: 2900191.1330409357
[2025-11-27 12:21:04] 2025-11-27 17:19:46,253 | INFO     | intersect: -14622717093.888983
[2025-11-27 12:21:04] 2025-11-27 17:19:46,254 | INFO     | chi2: 0.1799304003441125
[2025-11-27 12:21:04] 2025-11-27 17:19:46,254 | INFO     | current memory leak: 8.29 B/s (using 684 data points, chi2=0.18)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,254 | INFO     | could have reported an average CPU frequency of 3752 MHz (27 samples)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | ..............................
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . Timing measurements:
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . get job = 0 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . initial setup = 3 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . payload setup = 48 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . stage-in = 0 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . payload execution = 43593 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . stage-out = 5 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | . log creation = 0 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,255 | INFO     | ..............................
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | 
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | job summary report
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | --------------------------------------------------
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | PanDA job id: 6897487242
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | task id: 47556161
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | errors: (none)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | pilot state: finished 
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | transexitcode: 0
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | exeerrorcode: 0
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | exeerrordiag: 
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | exitcode: 0
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | exitmsg: OK
[2025-11-27 12:21:04] 2025-11-27 17:19:46,445 | INFO     | cpuconsumptiontime: 139995 s
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | nevents: 1000
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | neventsw: 0
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | pid: 3519299
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | pgrp: 3519299
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | corecount: 8
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | event service: False
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | sizes: {0: 2284265, 1: 2284265, 12: 2284293, 23: 2284321, 25: 2284611, 33: 2284639, 43645: 2330058, 43652: 2339108, 43695: 2339298}
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | --------------------------------------------------
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | 
[2025-11-27 12:21:04] 2025-11-27 17:19:46,446 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 12:21:04] 2025-11-27 17:19:46,618 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,618 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | job 6897487242 has completed (purged errors)
[2025-11-27 12:21:04] 2025-11-27 17:19:46,619 | INFO     | overall cleanup function is called
[2025-11-27 12:21:04] 2025-11-27 17:19:47,637 | INFO     | --- collectZombieJob: --- 10, [3519299]
[2025-11-27 12:21:04] 2025-11-27 17:19:47,637 | INFO     | zombie collector waiting for pid 3519299
[2025-11-27 12:21:04] 2025-11-27 17:19:47,637 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:21:04] 2025-11-27 17:19:47,637 | INFO     | collected zombie processes
[2025-11-27 12:21:04] 2025-11-27 17:19:47,637 | INFO     | will attempt to kill all subprocesses of pid=3519299
[2025-11-27 12:21:04] 2025-11-27 17:19:49,003 | INFO     | process IDs to be killed: [3519299] (in reverse order)
[2025-11-27 12:21:04] 2025-11-27 17:19:49,378 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:21:04] 2025-11-27 17:19:49,379 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:21:04] 2025-11-27 17:19:49,485 | INFO     | did not find any defunct processes belonging to 3519299
[2025-11-27 12:21:04] 2025-11-27 17:19:49,583 | INFO     | did not find any defunct processes belonging to 3519299
[2025-11-27 12:21:04] 2025-11-27 17:19:49,607 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:21:04] 2025-11-27 17:19:49,607 | INFO     | ready for new job
[2025-11-27 12:21:04] 2025-11-27 17:19:49,607 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:21:04] 2025-11-27 17:19:49,610 | INFO     | ***************************************
[2025-11-27 12:21:04] 2025-11-27 17:19:49,610 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:21:04] 2025-11-27 17:19:49,610 | INFO     | ***************************************
[2025-11-27 12:21:04] 2025-11-27 17:19:49,610 | INFO     | 
[2025-11-27 12:21:04] 2025-11-27 17:19:49,614 | INFO     | architecture information:
[2025-11-27 12:21:04] 2025-11-27 17:19:49,616 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:21:04] 2025-11-27 17:19:49,722 | INFO     | cat /etc/os-release:
[2025-11-27 12:21:04] NAME="CentOS Linux"
[2025-11-27 12:21:04] VERSION="7 (Core)"
[2025-11-27 12:21:04] ID="centos"
[2025-11-27 12:21:04] ID_LIKE="rhel fedora"
[2025-11-27 12:21:04] VERSION_ID="7"
[2025-11-27 12:21:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:21:04] ANSI_COLOR="0;31"
[2025-11-27 12:21:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:21:04] HOME_URL="https://www.centos.org/"
[2025-11-27 12:21:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:21:04] 
[2025-11-27 12:21:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:21:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:21:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:21:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:21:04] 
[2025-11-27 12:21:04] 2025-11-27 17:19:49,722 | INFO     | ***************************************
[2025-11-27 12:21:04] 2025-11-27 17:19:50,225 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 12:21:04] 2025-11-27 17:19:50,348 | INFO     | sufficient remaining disk space (161881260032 B)
[2025-11-27 12:21:04] 2025-11-27 17:19:50,349 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:21:04] 2025-11-27 17:19:50,349 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:21:04] 2025-11-27 17:19:50,349 | INFO     | update_server=False
[2025-11-27 12:21:04] 2025-11-27 17:19:50,349 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:21:04] 2025-11-27 17:19:50,350 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:21:04] 2025-11-27 17:19:50,409 | INFO     | all job control threads have been joined
[2025-11-27 12:21:04] 2025-11-27 17:19:50,693 | INFO     | all payload control threads have been joined
[2025-11-27 12:21:04] 2025-11-27 17:19:50,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:21:04] 2025-11-27 17:19:51,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:21:04] 2025-11-27 17:19:51,307 | INFO     | aborting loop
[2025-11-27 12:21:04] 2025-11-27 17:19:51,355 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:51,360 | INFO     | all data control threads have been joined
[2025-11-27 12:21:04] 2025-11-27 17:19:51,415 | INFO     | [job] control thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:51,499 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:21:04] 2025-11-27 17:19:51,663 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:51,699 | INFO     | [payload] control thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:51,704 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:51,891 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,165 | INFO     | [job] validate thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,312 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,357 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,366 | INFO     | [data] control thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,505 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,623 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,759 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,763 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:52,767 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:19:54,907 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:21:04] 2025-11-27 17:20:20,116 | INFO     | PID=3472796 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:21:04] 2025-11-27 17:20:20,116 | INFO     | .. there are 45 such processes running
[2025-11-27 12:21:04] 2025-11-27 17:20:20,117 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:21:04] 2025-11-27 17:20:20,117 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:21:04] 2025-11-27 17:20:20,117 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:21:04] 2025-11-27 17:20:43,248 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:21:04] 2025-11-27 17:20:44,438 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709275875136)>', '<ExcThread(monitor, started 140708547647232)>']
[2025-11-27 12:21:04] 2025-11-27 17:20:45,287 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:21:04] 2025-11-27 17:20:45,287 | INFO     | [monitor] control thread has ended
[2025-11-27 12:21:04] 2025-11-27 17:20:49,465 | INFO     | all workflow threads have been joined
[2025-11-27 12:21:04] 2025-11-27 17:20:49,465 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:21:04] 2025-11-27 17:20:49,465 | INFO     | traces error code: 0
[2025-11-27 12:21:04] 2025-11-27 17:20:49,465 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:21:04] 2025-11-27 17:20:50,372 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:21:04] 2025-11-27 17:20:50,398 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:21:04] 2025-11-27 17:20:50,457 [wrapper] pilotpid: 3472796
[2025-11-27 12:21:04] 2025-11-27 17:20:50,495 [wrapper] Pilot exit status: 0
[2025-11-27 12:21:04] 2025-11-27 17:20:50,621 [wrapper] pandaids: 6897487242
[2025-11-27 12:21:04] 2025-11-27 17:20:51,099 [wrapper] cleanup supervisor_pilot 3869287 3472797
[2025-11-27 12:21:04] 2025-11-27 17:20:51,108 [wrapper] Test setup, not cleaning
[2025-11-27 12:21:04] 2025-11-27 17:20:51,131 [wrapper] apfmon messages muted
[2025-11-27 12:21:04] 2025-11-27 17:20:51,159 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:21:04] 2025-11-27 17:20:51,183 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:21:04]  *** Error codes and diagnostics ***
[2025-11-27 12:21:04]     "exeErrorCode": 0,
[2025-11-27 12:21:04]     "exeErrorDiag": "",
[2025-11-27 12:21:04]     "pilotErrorCode": 0,
[2025-11-27 12:21:04]     "pilotErrorDiag": "",
[2025-11-27 12:21:04]  *** Listing of results directory ***
[2025-11-27 12:21:04] total 1307044
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 12:21:04] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:21:04] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:09 run_atlas
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:09 job.xml
[2025-11-27 12:21:04] -rw-r--r--. 2 boincer umatlas 410564153 Nov 27 00:09 EVNT.47483658._002246.pool.root.1
[2025-11-27 12:21:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:09 start_atlas.sh
[2025-11-27 12:21:04] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:09 shared
[2025-11-27 12:21:04] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 00:09 input.tar.gz
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:09 boinc_lockfile
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:09 pandaJob.out
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas        57 Nov 27 00:09 setup.sh.local
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas    991570 Nov 27 00:10 agis_schedconf.cvmfs.json
[2025-11-27 12:21:04] drwx------. 5 boincer umatlas      4096 Nov 27 00:10 pilot3
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:01 boinc_task_state.xml
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas 909027788 Nov 27 12:18 HITS.47556161._002297.pool.root.1
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas      1054 Nov 27 12:18 memory_monitor_summary.json
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:19 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas   1911531 Nov 27 12:19 log.47556161._002297.job.log.tgz.1
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 12:19 init_data.xml
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas      8580 Nov 27 12:19 heartbeat.json
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas        95 Nov 27 12:20 pilot_heartbeat.json
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas      4825 Nov 27 12:20 pilotlog.txt
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas   5538120 Nov 27 12:20 log.47556161._002297.job.log.1
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas       353 Nov 27 12:20 output.list
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:20 runtime_log
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas   7464960 Nov 27 12:20 result.tar.gz
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 12:20 runtime_log.err
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas       660 Nov 27 12:20 gFPLDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIbJKDmDHitOm.diag
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:21 wrapper_checkpoint.txt
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:21 boinc_mmap_file
[2025-11-27 12:21:04] -rw-r--r--. 1 boincer umatlas     20515 Nov 27 12:21 stderr.txt
[2025-11-27 12:21:04] HITS file was successfully produced:
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas 909027788 Nov 27 12:18 shared/HITS.pool.root.1
[2025-11-27 12:21:04]  *** Contents of shared directory: ***
[2025-11-27 12:21:04] total 1296564
[2025-11-27 12:21:04] -rw-r--r--. 2 boincer umatlas 410564153 Nov 27 00:09 ATLAS.root_0
[2025-11-27 12:21:04] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:09 start_atlas.sh
[2025-11-27 12:21:04] -rw-r--r--. 2 boincer umatlas    590103 Nov 27 00:09 input.tar.gz
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas 909027788 Nov 27 12:18 HITS.pool.root.1
[2025-11-27 12:21:04] -rw-------. 1 boincer umatlas   7464960 Nov 27 12:20 result.tar.gz
12:21:06 (3462966): run_atlas exited; CPU time 140633.222161
12:21:06 (3462966): called boinc_finish(0)

</stderr_txt>
]]>

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