Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:20:15 (1059783): wrapper (7.7.26015): starting
00:20:15 (1059783): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:20:15] Arguments: --nthreads 8
[2025-11-27 00:20:15] Threads: 8
[2025-11-27 00:20:15] Checking for CVMFS
[2025-11-27 00:20:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:20:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:20:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:20:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:20:17] 2.13.2.0 12053 36845 257636 153349 0 57 37513381 40960000 13150 16776704 0 39782426 99.737 25401584 38507 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:20:17] CVMFS is ok
[2025-11-27 00:20:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:20:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:20:17] Further information can be found at the LHC@home message board.
[2025-11-27 00:20:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:20:17] Checking for apptainer binary...
[2025-11-27 00:20:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:20:17] Running /usr/bin/apptainer --version
[2025-11-27 00:20:17] apptainer version 1.4.4-1.el9
[2025-11-27 00:20:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:20:18] c-210-31-4.aglt2.org
[2025-11-27 00:20:18] apptainer works
[2025-11-27 00:20:18] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:20:18] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:20:18] Starting ATLAS job with PandaID=6898178753
[2025-11-27 00:20:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:17:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:17:59] 2025-11-28 01:17:12,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:17:59] 2025-11-28 01:17:13,975 | INFO     | time since job start (71743s) is within the limit (172800.0s)
[2025-11-27 20:17:59] 2025-11-28 01:17:14,798 | INFO     | monitor loop #4714: job 0:6898178753 is in state 'finished'
[2025-11-27 20:17:59] 2025-11-28 01:17:14,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:17:59] 2025-11-28 01:17:15,983 | INFO     | time since job start (71745s) is within the limit (172800.0s)
[2025-11-27 20:17:59] 2025-11-28 01:17:17,327 | INFO     | monitor loop #4715: job 0:6898178753 is in state 'finished'
[2025-11-27 20:17:59] 2025-11-28 01:17:17,328 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:17:59] 2025-11-28 01:17:17,991 | INFO     | time since job start (71747s) is within the limit (172800.0s)
[2025-11-27 20:17:59] 2025-11-28 01:17:19,832 | INFO     | monitor loop #4716: job 0:6898178753 is in state 'finished'
[2025-11-27 20:17:59] 2025-11-28 01:17:19,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:17:59] 2025-11-28 01:17:20,002 | INFO     | time since job start (71750s) is within the limit (172800.0s)
[2025-11-27 20:17:59] 2025-11-28 01:17:22,009 | INFO     | time since job start (71752s) is within the limit (172800.0s)
[2025-11-27 20:17:59] 2025-11-28 01:17:22,341 | INFO     | monitor loop #4717: job 0:6898178753 is in state 'finished'
[2025-11-27 20:17:59] 2025-11-28 01:17:22,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,016 | INFO     | time since job start (71754s) is within the limit (172800.0s)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,510 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 20:17:59] 2025-11-28 01:17:24,518 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2805.85492857143
[2025-11-27 20:17:59] 2025-11-28 01:17:24,550 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898178753/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,551 | INFO     | extracted standard info from prmon json
[2025-11-27 20:17:59] 2025-11-28 01:17:24,551 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:17:59] 2025-11-28 01:17:24,551 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:17:59] 2025-11-28 01:17:24,586 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:17:59] 2025-11-28 01:17:24,588 | INFO     | sum of square deviations: 501731103728.4464
[2025-11-27 20:17:59] 2025-11-28 01:17:24,619 | INFO     | sum of deviations: 3354132579211.9043
[2025-11-27 20:17:59] 2025-11-28 01:17:24,619 | INFO     | mean x: 1764256814.5775127
[2025-11-27 20:17:59] 2025-11-28 01:17:24,619 | INFO     | mean y: 2896282.4735945486
[2025-11-27 20:17:59] 2025-11-28 01:17:24,620 | INFO     | intersect: -11791372033.556156
[2025-11-27 20:17:59] 2025-11-28 01:17:24,621 | INFO     | chi2: 23.035368733868577
[2025-11-27 20:17:59] 2025-11-28 01:17:24,623 | INFO     | sum of square deviations: 495348264006.61554
[2025-11-27 20:17:59] 2025-11-28 01:17:24,664 | INFO     | sum of deviations: 3742249505679.9873
[2025-11-27 20:17:59] 2025-11-28 01:17:24,664 | INFO     | mean x: 1764256662.0846877
[2025-11-27 20:17:59] 2025-11-28 01:17:24,664 | INFO     | mean y: 2905552.9597946964
[2025-11-27 20:17:59] 2025-11-28 01:17:24,677 | INFO     | intersect: -13325673754.407822
[2025-11-27 20:17:59] 2025-11-28 01:17:24,678 | INFO     | chi2: 19.847178377798617
[2025-11-27 20:17:59] 2025-11-28 01:17:24,678 | INFO     | current chi2=19.847178377798617 (change=13.84041381279219 %)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,678 | INFO     | right removable region: 1168
[2025-11-27 20:17:59] 2025-11-28 01:17:24,680 | INFO     | sum of square deviations: 495346919194.274
[2025-11-27 20:17:59] 2025-11-28 01:17:24,795 | INFO     | sum of deviations: 2863651119622.3447
[2025-11-27 20:17:59] 2025-11-28 01:17:24,795 | INFO     | mean x: 1764256967.0863986
[2025-11-27 20:17:59] 2025-11-28 01:17:24,795 | INFO     | mean y: 2907998.1351582548
[2025-11-27 20:17:59] 2025-11-28 01:17:24,795 | INFO     | intersect: -10196441676.46536
[2025-11-27 20:17:59] 2025-11-28 01:17:24,810 | INFO     | chi2: 18.56664440665802
[2025-11-27 20:17:59] 2025-11-28 01:17:24,810 | INFO     | current chi2=18.56664440665802 (change=19.399404363083857 %)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,810 | INFO     | left removable region: 10
[2025-11-27 20:17:59] 2025-11-28 01:17:24,811 | INFO     | sum of square deviations: 481494493541.0644
[2025-11-27 20:17:59] 2025-11-28 01:17:24,874 | INFO     | monitor loop #4718: job 0:6898178753 is in state 'finished'
[2025-11-27 20:17:59] 2025-11-28 01:17:24,874 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,881 | INFO     | sum of deviations: 2898631696532.017
[2025-11-27 20:17:59] 2025-11-28 01:17:24,881 | INFO     | mean x: 1764256936.603627
[2025-11-27 20:17:59] 2025-11-28 01:17:24,882 | INFO     | mean y: 2929800.4248704663
[2025-11-27 20:17:59] 2025-11-28 01:17:24,882 | INFO     | intersect: -10618024635.951477
[2025-11-27 20:17:59] 2025-11-28 01:17:24,883 | INFO     | chi2: 11.326919141939614
[2025-11-27 20:17:59] 2025-11-28 01:17:24,883 | INFO     | current memory leak: 6.02 B/s (using 1158 data points, chi2=11.33)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,884 | INFO     | could have reported an average CPU frequency of 2745 MHz (43 samples)
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | ..............................
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . Timing measurements:
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . get job = 0 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . initial setup = 6 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . payload setup = 46 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . stage-in = 0 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . payload execution = 71592 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . stage-out = 8 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | . log creation = 1 s
[2025-11-27 20:17:59] 2025-11-28 01:17:24,890 | INFO     | ..............................
[2025-11-27 20:17:59] 2025-11-28 01:17:25,261 | INFO     | 
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | job summary report
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | --------------------------------------------------
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | PanDA job id: 6898178753
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | task id: 47556173
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | errors: (none)
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | pilot state: finished 
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | transexitcode: 0
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | exeerrorcode: 0
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | exeerrordiag: 
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | exitcode: 0
[2025-11-27 20:17:59] 2025-11-28 01:17:25,262 | INFO     | exitmsg: OK
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | cpuconsumptiontime: 261485 s
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | nevents: 1000
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | neventsw: 0
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | pid: 1081420
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | pgrp: 1081420
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | corecount: 8
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | event service: False
[2025-11-27 20:17:59] 2025-11-28 01:17:25,263 | INFO     | sizes: {0: 2283436, 1: 2284121, 3: 2284149, 4: 2284320, 5: 2284348, 15: 2284404, 27: 2284560, 34: 2284850, 38: 2284878, 71643: 2344465, 71652: 2353795, 71686: 2353
[2025-11-27 20:17:59] 2025-11-28 01:17:25,264 | INFO     | --------------------------------------------------
[2025-11-27 20:17:59] 2025-11-28 01:17:25,264 | INFO     | 
[2025-11-27 20:17:59] 2025-11-28 01:17:25,264 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 20:17:59] 2025-11-28 01:17:25,573 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,573 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,573 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,573 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,573 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:17:59] 2025-11-28 01:17:25,574 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,575 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:17:59] 2025-11-28 01:17:25,575 | INFO     | job 6898178753 has completed (purged errors)
[2025-11-27 20:17:59] 2025-11-28 01:17:25,575 | INFO     | overall cleanup function is called
[2025-11-27 20:17:59] 2025-11-28 01:17:26,600 | INFO     | --- collectZombieJob: --- 10, [1081420]
[2025-11-27 20:17:59] 2025-11-28 01:17:26,601 | INFO     | zombie collector waiting for pid 1081420
[2025-11-27 20:17:59] 2025-11-28 01:17:26,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:17:59] 2025-11-28 01:17:26,601 | INFO     | collected zombie processes
[2025-11-27 20:17:59] 2025-11-28 01:17:26,601 | INFO     | will attempt to kill all subprocesses of pid=1081420
[2025-11-27 20:17:59] 2025-11-28 01:17:27,976 | INFO     | process IDs to be killed: [1081420] (in reverse order)
[2025-11-27 20:17:59] 2025-11-28 01:17:28,199 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:17:59] 2025-11-28 01:17:28,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:17:59] 2025-11-28 01:17:28,220 | INFO     | did not find any defunct processes belonging to 1081420
[2025-11-27 20:17:59] 2025-11-28 01:17:28,238 | INFO     | did not find any defunct processes belonging to 1081420
[2025-11-27 20:17:59] 2025-11-28 01:17:28,243 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:17:59] 2025-11-28 01:17:28,244 | INFO     | ready for new job
[2025-11-27 20:17:59] 2025-11-28 01:17:28,244 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:17:59] 2025-11-28 01:17:28,253 | INFO     | ***************************************
[2025-11-27 20:17:59] 2025-11-28 01:17:28,254 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:17:59] 2025-11-28 01:17:28,254 | INFO     | ***************************************
[2025-11-27 20:17:59] 2025-11-28 01:17:28,254 | INFO     | 
[2025-11-27 20:17:59] 2025-11-28 01:17:28,261 | INFO     | architecture information:
[2025-11-27 20:17:59] 2025-11-28 01:17:28,270 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:17:59] 2025-11-28 01:17:28,318 | INFO     | cat /etc/os-release:
[2025-11-27 20:17:59] NAME="CentOS Linux"
[2025-11-27 20:17:59] VERSION="7 (Core)"
[2025-11-27 20:17:59] ID="centos"
[2025-11-27 20:17:59] ID_LIKE="rhel fedora"
[2025-11-27 20:17:59] VERSION_ID="7"
[2025-11-27 20:17:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:17:59] ANSI_COLOR="0;31"
[2025-11-27 20:17:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:17:59] HOME_URL="https://www.centos.org/"
[2025-11-27 20:17:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:17:59] 
[2025-11-27 20:17:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:17:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:17:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:17:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:17:59] 
[2025-11-27 20:17:59] 2025-11-28 01:17:28,318 | INFO     | ***************************************
[2025-11-27 20:17:59] 2025-11-28 01:17:28,822 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 20:17:59] 2025-11-28 01:17:28,894 | INFO     | sufficient remaining disk space (68412243968 B)
[2025-11-27 20:17:59] 2025-11-28 01:17:28,895 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:17:59] 2025-11-28 01:17:28,895 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:17:59] 2025-11-28 01:17:28,895 | INFO     | update_server=False
[2025-11-27 20:17:59] 2025-11-28 01:17:28,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:17:59] 2025-11-28 01:17:28,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:17:59] 2025-11-28 01:17:28,896 | INFO     | aborting loop
[2025-11-27 20:17:59] 2025-11-28 01:17:28,906 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:17:59] 2025-11-28 01:17:29,026 | INFO     | all data control threads have been joined
[2025-11-27 20:17:59] 2025-11-28 01:17:29,220 | INFO     | all payload control threads have been joined
[2025-11-27 20:17:59] 2025-11-28 01:17:29,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:17:59] 2025-11-28 01:17:29,904 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:29,904 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,033 | INFO     | [data] control thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,227 | INFO     | [payload] control thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:17:59] 2025-11-28 01:17:30,327 | INFO     | all job control threads have been joined
[2025-11-27 20:17:59] 2025-11-28 01:17:30,421 | INFO     | [job] validate thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,502 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,812 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,932 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:30,932 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:31,058 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:31,180 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:31,306 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:31,333 | INFO     | [job] control thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:31,384 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:31,403 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:32,914 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:17:59] 2025-11-28 01:17:34,043 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:17:59] 2025-11-28 01:17:34,830 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698237638464)>', '<ExcThread(monitor, started 139697586149120)>']
[2025-11-27 20:17:59] 2025-11-28 01:17:39,856 | INFO     | all workflow threads have been joined
[2025-11-27 20:17:59] 2025-11-28 01:17:39,857 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:17:59] 2025-11-28 01:17:39,857 | INFO     | traces error code: 0
[2025-11-27 20:17:59] 2025-11-28 01:17:39,857 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:17:59] 2025-11-28 01:17:57,870 | INFO     | PID=1066762 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:17:59] 2025-11-28 01:17:57,871 | INFO     | .. there are 13 such processes running
[2025-11-27 20:17:59] 2025-11-28 01:17:57,871 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:17:59] 2025-11-28 01:17:57,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:17:59] 2025-11-28 01:17:57,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:17:59] 2025-11-28 01:17:57,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:17:59] 2025-11-28 01:17:57,872 | INFO     | [monitor] control thread has ended
[2025-11-27 20:17:59] 2025-11-28 01:17:58,299 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:17:59] 2025-11-28 01:17:58,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:17:59] 2025-11-28 01:17:58,332 [wrapper] pilotpid: 1066762
[2025-11-27 20:17:59] 2025-11-28 01:17:58,357 [wrapper] Pilot exit status: 0
[2025-11-27 20:17:59] 2025-11-28 01:17:58,471 [wrapper] pandaids: 6898178753
[2025-11-27 20:17:59] 2025-11-28 01:17:58,860 [wrapper] cleanup supervisor_pilot 3011026 1066763
[2025-11-27 20:17:59] 2025-11-28 01:17:58,880 [wrapper] Test setup, not cleaning
[2025-11-27 20:17:59] 2025-11-28 01:17:58,890 [wrapper] apfmon messages muted
[2025-11-27 20:17:59] 2025-11-28 01:17:58,905 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:17:59] 2025-11-28 01:17:58,921 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:17:59]  *** Error codes and diagnostics ***
[2025-11-27 20:17:59]     "exeErrorCode": 0,
[2025-11-27 20:17:59]     "exeErrorDiag": "",
[2025-11-27 20:17:59]     "pilotErrorCode": 0,
[2025-11-27 20:17:59]     "pilotErrorDiag": "",
[2025-11-27 20:17:59]  *** Listing of results directory ***
[2025-11-27 20:17:59] total 1337824
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:15 queuedata.json
[2025-11-27 20:17:59] -rwx------. 1 boincer umatlas     36292 Nov 25 23:19 runpilot2-wrapper.sh
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:17:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:20 run_atlas
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:20 job.xml
[2025-11-27 20:17:59] -rw-r--r--. 2 boincer umatlas 410010611 Nov 27 00:20 EVNT.47483658._003177.pool.root.1
[2025-11-27 20:17:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:20 start_atlas.sh
[2025-11-27 20:17:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:20 shared
[2025-11-27 20:17:59] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 00:20 input.tar.gz
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:20 boinc_lockfile
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:20 pandaJob.out
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas        57 Nov 27 00:20 setup.sh.local
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas    991578 Nov 27 00:21 agis_schedconf.cvmfs.json
[2025-11-27 20:17:59] drwx------. 5 boincer umatlas      4096 Nov 27 00:21 pilot3
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:50 boinc_task_state.xml
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas      6841 Nov 27 20:12 init_data.xml
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas 932114668 Nov 27 20:15 HITS.47556173._001336.pool.root.1
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas      1057 Nov 27 20:16 memory_monitor_summary.json
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:16 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas   2316277 Nov 27 20:16 log.47556173._001336.job.log.tgz.1
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas        95 Nov 27 20:16 pilot_heartbeat.json
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas      8635 Nov 27 20:17 heartbeat.json
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:17 wrapper_checkpoint.txt
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:17 boinc_mmap_file
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas       823 Nov 27 20:17 pilotlog.txt
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas   9626335 Nov 27 20:17 log.47556173._001336.job.log.1
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas       353 Nov 27 20:17 output.list
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:17 runtime_log
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas  11960320 Nov 27 20:17 result.tar.gz
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas       663 Nov 27 20:17 TsbNDmwAMi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm8uJKDm3cN3un.diag
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 20:17 runtime_log.err
[2025-11-27 20:17:59] -rw-r--r--. 1 boincer umatlas     21839 Nov 27 20:17 stderr.txt
[2025-11-27 20:17:59] HITS file was successfully produced:
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas 932114668 Nov 27 20:15 shared/HITS.pool.root.1
[2025-11-27 20:17:59]  *** Contents of shared directory: ***
[2025-11-27 20:17:59] total 1322960
[2025-11-27 20:17:59] -rw-r--r--. 2 boincer umatlas 410010611 Nov 27 00:20 ATLAS.root_0
[2025-11-27 20:17:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:20 start_atlas.sh
[2025-11-27 20:17:59] -rw-r--r--. 2 boincer umatlas    590109 Nov 27 00:20 input.tar.gz
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas 932114668 Nov 27 20:15 HITS.pool.root.1
[2025-11-27 20:17:59] -rw-------. 1 boincer umatlas  11960320 Nov 27 20:17 result.tar.gz
20:18:00 (1059783): run_atlas exited; CPU time 262751.554610
20:18:00 (1059783): called boinc_finish(0)

</stderr_txt>
]]>

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