Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:20:28 (886234): wrapper (7.7.26015): starting
00:20:28 (886234): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:20:28] Arguments: --nthreads 8
[2025-11-27 00:20:28] Threads: 8
[2025-11-27 00:20:28] Checking for CVMFS
[2025-11-27 00:20:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:20:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:20:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:20:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:20:29] 2.13.3.0 12763 31016 212884 153349 2 356 38298078 40960001 57660 16776704 0 275444014 99.746 169904861 35963 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:20:29] CVMFS is ok
[2025-11-27 00:20:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:20:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:20:29] Further information can be found at the LHC@home message board.
[2025-11-27 00:20:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:20:29] Checking for apptainer binary...
[2025-11-27 00:20:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:20:29] Running /usr/bin/apptainer --version
[2025-11-27 00:20:29] apptainer version 1.4.4-1.el9
[2025-11-27 00:20:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:20:29] c7-2-17.aglt2.org
[2025-11-27 00:20:29] apptainer works
[2025-11-27 00:20:29] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:20:29] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:20:29] Starting ATLAS job with PandaID=6892547892
[2025-11-27 00:20:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:30:38]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:30:38] 2025-11-27 18:29:45,654 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:30:38] 2025-11-27 18:29:45,664 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:30:38] 2025-11-27 18:29:45,665 | INFO     | sum of square deviations: 143774716434.09937
[2025-11-27 13:30:38] 2025-11-27 18:29:45,675 | INFO     | sum of deviations: 1760274750299.4473
[2025-11-27 13:30:38] 2025-11-27 18:29:45,675 | INFO     | mean x: 1764244543.8927648
[2025-11-27 13:30:38] 2025-11-27 18:29:45,676 | INFO     | mean y: 2861061.2583979326
[2025-11-27 13:30:38] 2025-11-27 18:29:45,676 | INFO     | intersect: -21597286732.400875
[2025-11-27 13:30:38] 2025-11-27 18:29:45,676 | INFO     | chi2: 11.98565551595828
[2025-11-27 13:30:38] 2025-11-27 18:29:45,677 | INFO     | sum of square deviations: 141006320035.8234
[2025-11-27 13:30:38] 2025-11-27 18:29:45,687 | INFO     | sum of deviations: 2035225000133.8027
[2025-11-27 13:30:38] 2025-11-27 18:29:45,687 | INFO     | mean x: 1764244391.3953185
[2025-11-27 13:30:38] 2025-11-27 18:29:45,687 | INFO     | mean y: 2876208.55656697
[2025-11-27 13:30:38] 2025-11-27 18:29:45,687 | INFO     | intersect: -25461473834.770412
[2025-11-27 13:30:38] 2025-11-27 18:29:45,688 | INFO     | chi2: 8.50576999222057
[2025-11-27 13:30:38] 2025-11-27 18:29:45,688 | INFO     | current chi2=8.50576999222057 (change=29.033752214089777 %)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,689 | INFO     | sum of square deviations: 138273645084.8302
[2025-11-27 13:30:38] 2025-11-27 18:29:45,698 | INFO     | sum of deviations: 2067432137959.657
[2025-11-27 13:30:38] 2025-11-27 18:29:45,699 | INFO     | mean x: 1764244238.896597
[2025-11-27 13:30:38] 2025-11-27 18:29:45,699 | INFO     | mean y: 2877993.945026178
[2025-11-27 13:30:38] 2025-11-27 18:29:45,699 | INFO     | intersect: -26375650151.944984
[2025-11-27 13:30:38] 2025-11-27 18:29:45,699 | INFO     | chi2: 8.211831958166282
[2025-11-27 13:30:38] 2025-11-27 18:29:45,700 | INFO     | current chi2=8.211831958166282 (change=3.455748677934211 %)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,700 | INFO     | right removable region: 763
[2025-11-27 13:30:38] 2025-11-27 18:29:45,700 | INFO     | sum of square deviations: 141006134595.8234
[2025-11-27 13:30:38] 2025-11-27 18:29:45,710 | INFO     | sum of deviations: 1453510987632.8142
[2025-11-27 13:30:38] 2025-11-27 18:29:45,710 | INFO     | mean x: 1764244696.3953185
[2025-11-27 13:30:38] 2025-11-27 18:29:45,710 | INFO     | mean y: 2877954.0598179456
[2025-11-27 13:30:38] 2025-11-27 18:29:45,711 | INFO     | intersect: -18183203512.777798
[2025-11-27 13:30:38] 2025-11-27 18:29:45,711 | INFO     | chi2: 7.777731450626819
[2025-11-27 13:30:38] 2025-11-27 18:29:45,711 | INFO     | current chi2=7.777731450626819 (change=35.10800105783808 %)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,712 | INFO     | sum of square deviations: 138273320870.0365
[2025-11-27 13:30:38] 2025-11-27 18:29:45,721 | INFO     | sum of deviations: 1182357424764.2078
[2025-11-27 13:30:38] 2025-11-27 18:29:45,721 | INFO     | mean x: 1764244848.8979058
[2025-11-27 13:30:38] 2025-11-27 18:29:45,721 | INFO     | mean y: 2893079.6308900523
[2025-11-27 13:30:38] 2025-11-27 18:29:45,722 | INFO     | intersect: -15082938251.179876
[2025-11-27 13:30:38] 2025-11-27 18:29:45,722 | INFO     | chi2: 4.6360631316896335
[2025-11-27 13:30:38] 2025-11-27 18:29:45,722 | INFO     | current chi2=4.6360631316896335 (change=40.393118981807916 %)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,723 | INFO     | sum of square deviations: 135576089054.03946
[2025-11-27 13:30:38] 2025-11-27 18:29:45,732 | INFO     | sum of deviations: 1068392937544.1357
[2025-11-27 13:30:38] 2025-11-27 18:29:45,732 | INFO     | mean x: 1764245001.3992095
[2025-11-27 13:30:38] 2025-11-27 18:29:45,733 | INFO     | mean y: 2899512.2239789194
[2025-11-27 13:30:38] 2025-11-27 18:29:45,733 | INFO     | intersect: -13900045415.189821
[2025-11-27 13:30:38] 2025-11-27 18:29:45,733 | INFO     | chi2: 4.069829184366348
[2025-11-27 13:30:38] 2025-11-27 18:29:45,733 | INFO     | current chi2=4.069829184366348 (change=12.21368068637406 %)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,733 | INFO     | left removable region: 30
[2025-11-27 13:30:38] 2025-11-27 18:29:45,734 | INFO     | sum of square deviations: 122115171330.40933
[2025-11-27 13:30:38] 2025-11-27 18:29:45,743 | INFO     | sum of deviations: 1230398166827.3574
[2025-11-27 13:30:38] 2025-11-27 18:29:45,744 | INFO     | mean x: 1764245123.3901772
[2025-11-27 13:30:38] 2025-11-27 18:29:45,744 | INFO     | mean y: 2925551.855388813
[2025-11-27 13:30:38] 2025-11-27 18:29:45,744 | INFO     | intersect: -17773112773.30906
[2025-11-27 13:30:38] 2025-11-27 18:29:45,744 | INFO     | chi2: 0.097801438418808
[2025-11-27 13:30:38] 2025-11-27 18:29:45,745 | INFO     | current memory leak: 10.08 B/s (using 733 data points, chi2=0.10)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | could have reported an average CPU frequency of 3358 MHz (29 samples)
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | ..............................
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . Timing measurements:
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . get job = 0 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . initial setup = 3 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . payload setup = 29 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . stage-in = 0 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . payload execution = 47224 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . stage-out = 5 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | . log creation = 0 s
[2025-11-27 13:30:38] 2025-11-27 18:29:45,746 | INFO     | ..............................
[2025-11-27 13:30:38] 2025-11-27 18:29:45,964 | INFO     | time since job start (47315s) is within the limit (172800.0s)
[2025-11-27 13:30:38] 2025-11-27 18:29:46,178 | INFO     | 
[2025-11-27 13:30:38] 2025-11-27 18:29:46,178 | INFO     | job summary report
[2025-11-27 13:30:38] 2025-11-27 18:29:46,178 | INFO     | --------------------------------------------------
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | PanDA job id: 6892547892
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | task id: 47493029
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | errors: (none)
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | pilot state: finished 
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | transexitcode: 0
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | exeerrorcode: 0
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | exeerrordiag: 
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | exitcode: 0
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | exitmsg: OK
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | cpuconsumptiontime: 189856 s
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | nevents: 1000
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | neventsw: 0
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | pid: 920402
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | pgrp: 920402
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | corecount: 8
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | event service: False
[2025-11-27 13:30:38] 2025-11-27 18:29:46,179 | INFO     | sizes: {0: 2284305, 1: 2284305, 12: 2284333, 21: 2284623, 23: 2284651, 47258: 2332459, 47263: 2341455, 47265: 2341511, 47273: 2341757}
[2025-11-27 13:30:38] 2025-11-27 18:29:46,180 | INFO     | --------------------------------------------------
[2025-11-27 13:30:38] 2025-11-27 18:29:46,180 | INFO     | 
[2025-11-27 13:30:38] 2025-11-27 18:29:46,180 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | job 6892547892 has completed (purged errors)
[2025-11-27 13:30:38] 2025-11-27 18:29:46,290 | INFO     | overall cleanup function is called
[2025-11-27 13:30:38] 2025-11-27 18:29:47,320 | INFO     | --- collectZombieJob: --- 10, [920402]
[2025-11-27 13:30:38] 2025-11-27 18:29:47,320 | INFO     | zombie collector waiting for pid 920402
[2025-11-27 13:30:38] 2025-11-27 18:29:47,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:30:38] 2025-11-27 18:29:47,321 | INFO     | collected zombie processes
[2025-11-27 13:30:38] 2025-11-27 18:29:47,321 | INFO     | will attempt to kill all subprocesses of pid=920402
[2025-11-27 13:30:38] 2025-11-27 18:29:48,093 | INFO     | process IDs to be killed: [920402] (in reverse order)
[2025-11-27 13:30:38] 2025-11-27 18:29:48,467 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:30:38] 2025-11-27 18:29:48,468 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:30:38] 2025-11-27 18:29:48,549 | INFO     | did not find any defunct processes belonging to 920402
[2025-11-27 13:30:38] 2025-11-27 18:29:48,595 | INFO     | did not find any defunct processes belonging to 920402
[2025-11-27 13:30:38] 2025-11-27 18:29:48,596 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:30:38] 2025-11-27 18:29:48,596 | INFO     | ready for new job
[2025-11-27 13:30:38] 2025-11-27 18:29:48,597 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:30:38] 2025-11-27 18:29:48,599 | INFO     | ***************************************
[2025-11-27 13:30:38] 2025-11-27 18:29:48,599 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:30:38] 2025-11-27 18:29:48,599 | INFO     | ***************************************
[2025-11-27 13:30:38] 2025-11-27 18:29:48,599 | INFO     | 
[2025-11-27 13:30:38] 2025-11-27 18:29:48,604 | INFO     | architecture information:
[2025-11-27 13:30:38] 2025-11-27 18:29:48,605 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:30:38] 2025-11-27 18:29:48,649 | INFO     | cat /etc/os-release:
[2025-11-27 13:30:38] NAME="CentOS Linux"
[2025-11-27 13:30:38] VERSION="7 (Core)"
[2025-11-27 13:30:38] ID="centos"
[2025-11-27 13:30:38] ID_LIKE="rhel fedora"
[2025-11-27 13:30:38] VERSION_ID="7"
[2025-11-27 13:30:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:30:38] ANSI_COLOR="0;31"
[2025-11-27 13:30:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:30:38] HOME_URL="https://www.centos.org/"
[2025-11-27 13:30:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:30:38] 
[2025-11-27 13:30:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:30:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:30:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:30:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:30:38] 
[2025-11-27 13:30:38] 2025-11-27 18:29:48,649 | INFO     | ***************************************
[2025-11-27 13:30:38] 2025-11-27 18:29:49,153 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-11-27 13:30:38] 2025-11-27 18:29:49,209 | INFO     | sufficient remaining disk space (119022813184 B)
[2025-11-27 13:30:38] 2025-11-27 18:29:49,209 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:30:38] 2025-11-27 18:29:49,210 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:30:38] 2025-11-27 18:29:49,210 | INFO     | update_server=False
[2025-11-27 13:30:38] 2025-11-27 18:29:49,210 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:30:38] 2025-11-27 18:29:49,210 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:30:38] 2025-11-27 18:29:49,236 | INFO     | all payload control threads have been joined
[2025-11-27 13:30:38] 2025-11-27 18:29:49,437 | INFO     | all data control threads have been joined
[2025-11-27 13:30:38] 2025-11-27 18:29:49,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:30:38] 2025-11-27 18:29:49,538 | INFO     | all job control threads have been joined
[2025-11-27 13:30:38] 2025-11-27 18:29:50,017 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:30:38] 2025-11-27 18:29:50,017 | INFO     | aborting loop
[2025-11-27 13:30:38] 2025-11-27 18:29:50,216 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,242 | INFO     | [payload] control thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,443 | INFO     | [data] control thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,512 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,548 | INFO     | [job] control thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,556 | INFO     | [job] validate thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,581 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,834 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:30:38] 2025-11-27 18:29:50,860 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:50,925 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:51,018 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:51,023 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:51,168 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:51,308 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:51,507 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:51,840 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:29:53,219 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:30:38] 2025-11-27 18:30:20,101 | INFO     | PID=898947 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 13:30:38] 2025-11-27 18:30:20,101 | INFO     | .. there are 84 such processes running
[2025-11-27 13:30:38] 2025-11-27 18:30:20,102 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:30:38] 2025-11-27 18:30:20,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:30:38] 2025-11-27 18:30:20,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:30:38] 2025-11-27 18:30:32,209 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:30:38] 2025-11-27 18:30:33,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139930972866368)>', '<ExcThread(monitor, started 139930017715968)>']
[2025-11-27 13:30:38] 2025-11-27 18:30:33,187 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:30:38] 2025-11-27 18:30:33,187 | INFO     | [monitor] control thread has ended
[2025-11-27 13:30:38] 2025-11-27 18:30:38,119 | INFO     | all workflow threads have been joined
[2025-11-27 13:30:38] 2025-11-27 18:30:38,119 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:30:38] 2025-11-27 18:30:38,120 | INFO     | traces error code: 0
[2025-11-27 13:30:38] 2025-11-27 18:30:38,120 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:30:38] 2025-11-27 18:30:38,397 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:30:38] 2025-11-27 18:30:38,400 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:30:38] 2025-11-27 18:30:38,404 [wrapper] pilotpid: 898947
[2025-11-27 13:30:38] 2025-11-27 18:30:38,409 [wrapper] Pilot exit status: 0
[2025-11-27 13:30:38] 2025-11-27 18:30:38,431 [wrapper] pandaids: 6892547892
[2025-11-27 13:30:38] 2025-11-27 18:30:38,589 [wrapper] cleanup supervisor_pilot 1540666 898948
[2025-11-27 13:30:38] 2025-11-27 18:30:38,593 [wrapper] Test setup, not cleaning
[2025-11-27 13:30:38] 2025-11-27 18:30:38,598 [wrapper] apfmon messages muted
[2025-11-27 13:30:38] 2025-11-27 18:30:38,601 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:30:38] 2025-11-27 18:30:38,606 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:30:38]  *** Error codes and diagnostics ***
[2025-11-27 13:30:38]     "exeErrorCode": 0,
[2025-11-27 13:30:38]     "exeErrorDiag": "",
[2025-11-27 13:30:38]     "pilotErrorCode": 0,
[2025-11-27 13:30:38]     "pilotErrorDiag": "",
[2025-11-27 13:30:38]  *** Listing of results directory ***
[2025-11-27 13:30:38] total 1326520
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 03:32 pilot3.tar.gz
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 03:33 queuedata.json
[2025-11-27 13:30:38] -rwx------. 1 boincer umatlas     36292 Nov 19 03:35 runpilot2-wrapper.sh
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:30:38] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:20 run_atlas
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:20 job.xml
[2025-11-27 13:30:38] -rw-r--r--. 2 boincer umatlas 410107200 Nov 27 00:20 EVNT.47493027._000319.pool.root.1
[2025-11-27 13:30:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:20 start_atlas.sh
[2025-11-27 13:30:38] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:20 shared
[2025-11-27 13:30:38] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 00:20 input.tar.gz
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:20 boinc_lockfile
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas      2773 Nov 27 00:20 pandaJob.out
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas    991578 Nov 27 00:21 agis_schedconf.cvmfs.json
[2025-11-27 13:30:38] drwx------. 5 boincer umatlas      4096 Nov 27 00:21 pilot3
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:20 boinc_task_state.xml
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 13:21 init_data.xml
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas 928046457 Nov 27 13:28 HITS.47493029._003150.pool.root.1
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas      1069 Nov 27 13:29 memory_monitor_summary.json
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:29 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas   1980912 Nov 27 13:29 log.47493029._003150.job.log.tgz.1
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas      8638 Nov 27 13:29 heartbeat.json
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas        95 Nov 27 13:30 pilot_heartbeat.json
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas        29 Nov 27 13:30 wrapper_checkpoint.txt
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:30 boinc_mmap_file
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas      4825 Nov 27 13:30 pilotlog.txt
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas   6160711 Nov 27 13:30 log.47493029._003150.job.log.1
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas       353 Nov 27 13:30 output.list
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:30 runtime_log
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas   8161280 Nov 27 13:30 result.tar.gz
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas      8713 Nov 27 13:30 runtime_log.err
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas       663 Nov 27 13:30 5LlLDm3psf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmu6FKDmoujbWo.diag
[2025-11-27 13:30:38] -rw-r--r--. 1 boincer umatlas     21153 Nov 27 13:30 stderr.txt
[2025-11-27 13:30:38] HITS file was successfully produced:
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas 928046457 Nov 27 13:28 shared/HITS.pool.root.1
[2025-11-27 13:30:38]  *** Contents of shared directory: ***
[2025-11-27 13:30:38] total 1315368
[2025-11-27 13:30:38] -rw-r--r--. 2 boincer umatlas 410107200 Nov 27 00:20 ATLAS.root_0
[2025-11-27 13:30:38] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:20 start_atlas.sh
[2025-11-27 13:30:38] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 00:20 input.tar.gz
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas 928046457 Nov 27 13:28 HITS.pool.root.1
[2025-11-27 13:30:38] -rw-------. 1 boincer umatlas   8161280 Nov 27 13:30 result.tar.gz
13:30:40 (886234): run_atlas exited; CPU time 191402.984212
13:30:40 (886234): called boinc_finish(0)

</stderr_txt>
]]>

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