Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:16:11 (3073133): wrapper (7.7.26015): starting
06:16:11 (3073133): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 06:16:11] Arguments: --nthreads 9
[2025-11-27 06:16:11] Threads: 9
[2025-11-27 06:16:11] Checking for CVMFS
[2025-11-27 06:16:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 06:16:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 06:16:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 06:16:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 06:16:12] 2.13.3.0 10982 31419 339156 153362 3 57 35275730 40960001 27035 16776704 0 156826582 99.696 124356856 39105 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 06:16:12] CVMFS is ok
[2025-11-27 06:16:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 06:16:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 06:16:12] Further information can be found at the LHC@home message board.
[2025-11-27 06:16:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 06:16:12] Checking for apptainer binary...
[2025-11-27 06:16:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 06:16:12] Running /usr/bin/apptainer --version
[2025-11-27 06:16:12] apptainer version 1.4.4-1.el9
[2025-11-27 06:16:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 06:16:12] c6-8-12-3.aglt2.org
[2025-11-27 06:16:12] apptainer works
[2025-11-27 06:16:12] Set ATHENA_PROC_NUMBER=9
[2025-11-27 06:16:12] Set ATHENA_CORE_NUMBER=9
[2025-11-27 06:16:12] Starting ATLAS job with PandaID=6897394911
[2025-11-27 06:16:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 07:46:59]  *** The last 200 lines of the pilot log: ***
[2025-11-28 07:46:59] 2025-11-28 11:41:23,160 | INFO     | mean x: 1764286122.786111
[2025-11-28 07:46:59] 2025-11-28 11:41:23,160 | INFO     | mean y: 3121230.2680555554
[2025-11-28 07:46:59] 2025-11-28 11:41:23,161 | INFO     | intersect: -6571587280.539762
[2025-11-28 07:46:59] 2025-11-28 11:41:23,162 | INFO     | chi2: 13.561898237461145
[2025-11-28 07:46:59] 2025-11-28 11:41:23,177 | INFO     | PID=3076895 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 07:46:59] 2025-11-28 11:41:23,177 | INFO     | .. there are 40 such processes running
[2025-11-28 07:46:59] 2025-11-28 11:41:23,179 | INFO     | sum of square deviations: 916320849989.4873
[2025-11-28 07:46:59] 2025-11-28 11:41:23,281 | INFO     | sum of deviations: 3995984388871.2656
[2025-11-28 07:46:59] 2025-11-28 11:41:23,281 | INFO     | mean x: 1764285970.2933798
[2025-11-28 07:46:59] 2025-11-28 11:41:23,282 | INFO     | mean y: 3129883.248780488
[2025-11-28 07:46:59] 2025-11-28 11:41:23,282 | INFO     | intersect: -7690746333.665659
[2025-11-28 07:46:59] 2025-11-28 11:41:23,283 | INFO     | chi2: 10.054292664691006
[2025-11-28 07:46:59] 2025-11-28 11:41:23,283 | INFO     | current chi2=10.054292664691006 (change=25.863677129513547 %)
[2025-11-28 07:46:59] 2025-11-28 11:41:23,297 | INFO     | sum of square deviations: 906777218945.5986
[2025-11-28 07:46:59] 2025-11-28 11:41:23,424 | INFO     | sum of deviations: 4581923140080.459
[2025-11-28 07:46:59] 2025-11-28 11:41:23,425 | INFO     | mean x: 1764285817.8013985
[2025-11-28 07:46:59] 2025-11-28 11:41:23,425 | INFO     | mean y: 3139246.072027972
[2025-11-28 07:46:59] 2025-11-28 11:41:23,425 | INFO     | intersect: -8911753900.1187
[2025-11-28 07:46:59] 2025-11-28 11:41:23,439 | INFO     | chi2: 6.158616054175244
[2025-11-28 07:46:59] 2025-11-28 11:41:23,439 | INFO     | current chi2=6.158616054175244 (change=38.74640156633521 %)
[2025-11-28 07:46:59] 2025-11-28 11:41:23,440 | INFO     | sum of square deviations: 897299926809.755
[2025-11-28 07:46:59] 2025-11-28 11:41:23,599 | INFO     | sum of deviations: 4999791655133.199
[2025-11-28 07:46:59] 2025-11-28 11:41:23,600 | INFO     | mean x: 1764285665.3080702
[2025-11-28 07:46:59] 2025-11-28 11:41:23,600 | INFO     | mean y: 3145964.801403509
[2025-11-28 07:46:59] 2025-11-28 11:41:23,616 | INFO     | intersect: -9827525456.337194
[2025-11-28 07:46:59] 2025-11-28 11:41:23,618 | INFO     | chi2: 3.792581830756653
[2025-11-28 07:46:59] 2025-11-28 11:41:23,618 | INFO     | current chi2=3.792581830756653 (change=38.418277785226344 %)
[2025-11-28 07:46:59] 2025-11-28 11:41:23,619 | INFO     | sum of square deviations: 887888566808.7976
[2025-11-28 07:46:59] 2025-11-28 11:41:23,758 | INFO     | sum of deviations: 5260090006730.152
[2025-11-28 07:46:59] 2025-11-28 11:41:23,758 | INFO     | mean x: 1764285512.811972
[2025-11-28 07:46:59] 2025-11-28 11:41:23,758 | INFO     | mean y: 3150182.543661972
[2025-11-28 07:46:59] 2025-11-28 11:41:23,758 | INFO     | intersect: -10448950387.143597
[2025-11-28 07:46:59] 2025-11-28 11:41:23,765 | INFO     | chi2: 2.8735608445328302
[2025-11-28 07:46:59] 2025-11-28 11:41:23,765 | INFO     | current chi2=2.8735608445328302 (change=24.232067420954504 %)
[2025-11-28 07:46:59] 2025-11-28 11:41:23,766 | INFO     | right removable region: 1419
[2025-11-28 07:46:59] 2025-11-28 11:41:23,767 | INFO     | sum of square deviations: 916318929461.9006
[2025-11-28 07:46:59] 2025-11-28 11:41:23,878 | INFO     | sum of deviations: 3028364725644.8438
[2025-11-28 07:46:59] 2025-11-28 11:41:23,879 | INFO     | mean x: 1764286275.2940767
[2025-11-28 07:46:59] 2025-11-28 11:41:23,879 | INFO     | mean y: 3127922.3463414633
[2025-11-28 07:46:59] 2025-11-28 11:41:23,879 | INFO     | intersect: -5827704717.090102
[2025-11-28 07:46:59] 2025-11-28 11:41:23,880 | INFO     | chi2: 11.416154281375714
[2025-11-28 07:46:59] 2025-11-28 11:41:23,880 | INFO     | current chi2=11.416154281375714 (change=15.821855602472981 %)
[2025-11-28 07:46:59] 2025-11-28 11:41:23,881 | INFO     | left removable region: 10
[2025-11-28 07:46:59] 2025-11-28 11:41:23,901 | INFO     | sum of square deviations: 867412616598.4227
[2025-11-28 07:46:59] 2025-11-28 11:41:24,108 | INFO     | sum of deviations: 4779975421270.912
[2025-11-28 07:46:59] 2025-11-28 11:41:24,110 | INFO     | mean x: 1764285787.3236337
[2025-11-28 07:46:59] 2025-11-28 11:41:24,110 | INFO     | mean y: 3159449.3839602554
[2025-11-28 07:46:59] 2025-11-28 11:41:24,110 | INFO     | intersect: -9719137111.825527
[2025-11-28 07:46:59] 2025-11-28 11:41:24,112 | INFO     | chi2: 0.5144512937884457
[2025-11-28 07:46:59] 2025-11-28 11:41:24,113 | INFO     | current memory leak: 5.51 B/s (using 1409 data points, chi2=0.51)
[2025-11-28 07:46:59] 2025-11-28 11:41:24,116 | INFO     | could have reported an average CPU frequency of 2961 MHz (51 samples)
[2025-11-28 07:46:59] 2025-11-28 11:41:24,116 | INFO     | ..............................
[2025-11-28 07:46:59] 2025-11-28 11:41:24,117 | INFO     | . Timing measurements:
[2025-11-28 07:46:59] 2025-11-28 11:41:24,117 | INFO     | . get job = 0 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,117 | INFO     | . initial setup = 3 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,117 | INFO     | . payload setup = 10 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,117 | INFO     | . stage-in = 0 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,117 | INFO     | . payload execution = 87813 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,118 | INFO     | . stage-out = 13 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,118 | INFO     | . log creation = 4 s
[2025-11-28 07:46:59] 2025-11-28 11:41:24,118 | INFO     | ..............................
[2025-11-28 07:46:59] 2025-11-28 11:41:24,193 | INFO     | time since job start (87893s) is within the limit (172800.0s)
[2025-11-28 07:46:59] 2025-11-28 11:41:25,261 | INFO     | 
[2025-11-28 07:46:59] 2025-11-28 11:41:25,267 | INFO     | job summary report
[2025-11-28 07:46:59] 2025-11-28 11:41:25,267 | INFO     | --------------------------------------------------
[2025-11-28 07:46:59] 2025-11-28 11:41:25,267 | INFO     | PanDA job id: 6897394911
[2025-11-28 07:46:59] 2025-11-28 11:41:25,267 | INFO     | task id: 47556161
[2025-11-28 07:46:59] 2025-11-28 11:41:25,267 | INFO     | errors: (none)
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | pilot state: finished 
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | transexitcode: 0
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | exeerrorcode: 0
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | exeerrordiag: 
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | exitcode: 0
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | exitmsg: OK
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | cpuconsumptiontime: 254638 s
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | nevents: 1000
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | neventsw: 0
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | pid: 3085056
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | pgrp: 3085056
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | corecount: 9
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | event service: False
[2025-11-28 07:46:59] 2025-11-28 11:41:25,268 | INFO     | sizes: {0: 2284094, 1: 2284293, 10: 2284555, 11: 2284583, 87826: 2350090, 87827: 2350089, 87842: 2359323, 87873: 2359513}
[2025-11-28 07:46:59] 2025-11-28 11:41:25,269 | INFO     | --------------------------------------------------
[2025-11-28 07:46:59] 2025-11-28 11:41:25,269 | INFO     | 
[2025-11-28 07:46:59] 2025-11-28 11:41:25,269 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-28 07:46:59] 2025-11-28 11:41:25,393 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,394 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | job 6897394911 has completed (purged errors)
[2025-11-28 07:46:59] 2025-11-28 11:41:25,395 | INFO     | overall cleanup function is called
[2025-11-28 07:46:59] 2025-11-28 11:41:26,410 | INFO     | --- collectZombieJob: --- 10, [3085056]
[2025-11-28 07:46:59] 2025-11-28 11:41:26,411 | INFO     | zombie collector waiting for pid 3085056
[2025-11-28 07:46:59] 2025-11-28 11:41:26,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 07:46:59] 2025-11-28 11:41:26,411 | INFO     | collected zombie processes
[2025-11-28 07:46:59] 2025-11-28 11:41:26,411 | INFO     | will attempt to kill all subprocesses of pid=3085056
[2025-11-28 07:46:59] 2025-11-28 11:41:28,068 | INFO     | process IDs to be killed: [3085056] (in reverse order)
[2025-11-28 07:46:59] 2025-11-28 11:41:28,316 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 07:46:59] 2025-11-28 11:41:28,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 07:46:59] 2025-11-28 11:41:28,356 | INFO     | did not find any defunct processes belonging to 3085056
[2025-11-28 07:46:59] 2025-11-28 11:41:28,378 | INFO     | did not find any defunct processes belonging to 3085056
[2025-11-28 07:46:59] 2025-11-28 11:41:28,381 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 07:46:59] 2025-11-28 11:41:28,382 | INFO     | ready for new job
[2025-11-28 07:46:59] 2025-11-28 11:41:28,382 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 07:46:59] 2025-11-28 11:41:28,396 | INFO     | ***************************************
[2025-11-28 07:46:59] 2025-11-28 11:41:28,401 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 07:46:59] 2025-11-28 11:41:28,401 | INFO     | ***************************************
[2025-11-28 07:46:59] 2025-11-28 11:41:28,401 | INFO     | 
[2025-11-28 07:46:59] 2025-11-28 11:41:28,405 | INFO     | architecture information:
[2025-11-28 07:46:59] 2025-11-28 11:41:28,413 | INFO     | executing command: cat /etc/os-release
[2025-11-28 07:46:59] 2025-11-28 11:41:28,509 | INFO     | cat /etc/os-release:
[2025-11-28 07:46:59] NAME="CentOS Linux"
[2025-11-28 07:46:59] VERSION="7 (Core)"
[2025-11-28 07:46:59] ID="centos"
[2025-11-28 07:46:59] ID_LIKE="rhel fedora"
[2025-11-28 07:46:59] VERSION_ID="7"
[2025-11-28 07:46:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 07:46:59] ANSI_COLOR="0;31"
[2025-11-28 07:46:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 07:46:59] HOME_URL="https://www.centos.org/"
[2025-11-28 07:46:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 07:46:59] 
[2025-11-28 07:46:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 07:46:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 07:46:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 07:46:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 07:46:59] 
[2025-11-28 07:46:59] 2025-11-28 11:41:28,509 | INFO     | ***************************************
[2025-11-28 07:46:59] 2025-11-28 11:41:29,013 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-28 07:46:59] 2025-11-28 11:41:29,078 | INFO     | sufficient remaining disk space (49036656640 B)
[2025-11-28 07:46:59] 2025-11-28 11:41:29,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 07:46:59] 2025-11-28 11:41:29,078 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 07:46:59] 2025-11-28 11:41:29,079 | INFO     | update_server=False
[2025-11-28 07:46:59] 2025-11-28 11:41:29,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 07:46:59] 2025-11-28 11:41:29,264 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 07:46:59] 2025-11-28 11:41:29,264 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 07:46:59] 2025-11-28 11:41:29,264 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:46:59] 2025-11-28 11:41:29,265 | INFO     | will abort loop
[2025-11-28 07:46:59] 2025-11-28 11:41:29,801 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 07:46:59] 2025-11-28 11:41:29,850 | INFO     | all data control threads have been joined
[2025-11-28 07:46:59] 2025-11-28 11:41:30,089 | INFO     | [job] retrieve thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,286 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,290 | INFO     | [job] job monitor thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,290 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,304 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 07:46:59] 2025-11-28 11:41:30,431 | INFO     | [job] validate thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,444 | INFO     | all job control threads have been joined
[2025-11-28 07:46:59] 2025-11-28 11:41:30,465 | INFO     | all payload control threads have been joined
[2025-11-28 07:46:59] 2025-11-28 11:41:30,815 | INFO     | [payload] failed_post thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,857 | INFO     | [data] control thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:30,928 | INFO     | [payload] validate_post thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:31,261 | INFO     | [data] copytool_in thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:31,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:31,314 | INFO     | [job] queue monitor thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:31,452 | INFO     | [job] control thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:31,471 | INFO     | [payload] control thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:31,807 | INFO     | [data] copytool_out thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:32,401 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 07:46:59] 2025-11-28 11:41:36,410 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 07:46:59] 2025-11-28 11:41:58,844 | INFO     | PID=3076895 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 07:46:59] 2025-11-28 11:41:58,844 | INFO     | .. there are 40 such processes running
[2025-11-28 07:46:59] 2025-11-28 11:41:58,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 07:46:59] 2025-11-28 11:41:58,844 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 07:46:59] 2025-11-28 11:41:58,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 07:46:59] 2025-11-28 11:42:09,394 | INFO     | [monitor] cgroup control has ended
[2025-11-28 07:46:59] 2025-11-28 11:42:10,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140223054567232)>', '<ExcThread(monitor, started 140222276818688)>']
[2025-11-28 07:46:59] 2025-11-28 11:42:10,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 07:46:59] 2025-11-28 11:42:10,941 | INFO     | [monitor] control thread has ended
[2025-11-28 07:46:59] 2025-11-28 11:42:15,951 | INFO     | all workflow threads have been joined
[2025-11-28 07:46:59] 2025-11-28 11:42:15,951 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 07:46:59] 2025-11-28 11:42:15,952 | INFO     | traces error code: 0
[2025-11-28 07:46:59] 2025-11-28 11:42:15,952 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 07:46:59] 2025-11-28 11:42:16,620 [wrapper] ==== pilot stdout END ====
[2025-11-28 07:46:59] 2025-11-28 11:42:16,634 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 07:46:59] 2025-11-28 11:42:16,650 [wrapper] pilotpid: 3076895
[2025-11-28 07:46:59] 2025-11-28 11:42:16,675 [wrapper] Pilot exit status: 0
[2025-11-28 07:46:59] 2025-11-28 11:42:16,811 [wrapper] pandaids: 6897394911
[2025-11-28 07:46:59] 2025-11-28 11:42:16,971 [wrapper] cleanup supervisor_pilot 3214200 3076896
[2025-11-28 07:46:59] 2025-11-28 11:42:16,996 [wrapper] Test setup, not cleaning
[2025-11-28 07:46:59] 2025-11-28 11:42:17,031 [wrapper] apfmon messages muted
[2025-11-28 07:46:59] 2025-11-28 11:42:17,064 [wrapper] ==== wrapper stdout END ====
[2025-11-28 07:46:59] 2025-11-28 11:42:17,078 [wrapper] ==== wrapper stderr END ====
[2025-11-28 07:46:59]  *** Error codes and diagnostics ***
[2025-11-28 07:46:59]     "exeErrorCode": 0,
[2025-11-28 07:46:59]     "exeErrorDiag": "",
[2025-11-28 07:46:59]     "pilotErrorCode": 0,
[2025-11-28 07:46:59]     "pilotErrorDiag": "",
[2025-11-28 07:46:59]  *** Listing of results directory ***
[2025-11-28 07:46:59] total 1346108
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-28 07:46:59] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas       100 Nov 27 06:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 07:46:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 06:16 run_atlas
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas       105 Nov 27 06:16 job.xml
[2025-11-28 07:46:59] -rw-r--r--. 2 boincer umatlas 410849235 Nov 27 06:16 EVNT.47483658._002241.pool.root.1
[2025-11-28 07:46:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:16 start_atlas.sh
[2025-11-28 07:46:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 06:16 shared
[2025-11-28 07:46:59] -rw-r--r--. 2 boincer umatlas    590111 Nov 27 06:16 input.tar.gz
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas         0 Nov 27 06:16 boinc_lockfile
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 06:16 pandaJob.out
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas        57 Nov 27 06:16 setup.sh.local
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas    991572 Nov 27 06:16 agis_schedconf.cvmfs.json
[2025-11-28 07:46:59] drwx------. 5 boincer umatlas      4096 Nov 27 06:16 pilot3
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas       533 Nov 28 06:11 boinc_task_state.xml
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas 936231275 Nov 28 06:38 HITS.47556161._002243.pool.root.1
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas      1058 Nov 28 06:40 memory_monitor_summary.json
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas   1516240 Nov 28 06:40 agis_ddmendpoints.agis.ALL.json
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas   2572055 Nov 28 06:40 log.47556161._002243.job.log.tgz.1
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas        95 Nov 28 06:41 pilot_heartbeat.json
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas      8619 Nov 28 06:41 heartbeat.json
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas      5010 Nov 28 06:42 pilotlog.txt
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas  11136524 Nov 28 06:42 log.47556161._002243.job.log.1
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas       353 Nov 28 06:42 output.list
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas       620 Nov 28 06:42 runtime_log
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas  13731840 Nov 28 06:42 result.tar.gz
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas       661 Nov 28 06:42 SYkNDmDXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJWMKDmXKjwSm.diag
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas      9348 Nov 28 06:42 runtime_log.err
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas      6844 Nov 28 07:46 init_data.xml
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 07:46 boinc_mmap_file
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas        29 Nov 28 07:46 wrapper_checkpoint.txt
[2025-11-28 07:46:59] -rw-r--r--. 1 boincer umatlas     12363 Nov 28 07:46 stderr.txt
[2025-11-28 07:46:59] HITS file was successfully produced:
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas 936231275 Nov 28 06:38 shared/HITS.pool.root.1
[2025-11-28 07:46:59]  *** Contents of shared directory: ***
[2025-11-28 07:46:59] total 1329528
[2025-11-28 07:46:59] -rw-r--r--. 2 boincer umatlas 410849235 Nov 27 06:16 ATLAS.root_0
[2025-11-28 07:46:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 06:16 start_atlas.sh
[2025-11-28 07:46:59] -rw-r--r--. 2 boincer umatlas    590111 Nov 27 06:16 input.tar.gz
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas 936231275 Nov 28 06:38 HITS.pool.root.1
[2025-11-28 07:46:59] -rw-------. 1 boincer umatlas  13731840 Nov 28 06:42 result.tar.gz
07:47:01 (3073133): run_atlas exited; CPU time 256989.104176
07:47:01 (3073133): called boinc_finish(0)

</stderr_txt>
]]>

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