Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:09:19 (3393276): wrapper (7.7.26015): starting
00:09:19 (3393276): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:09:19] Arguments: --nthreads 9
[2025-11-27 00:09:19] Threads: 9
[2025-11-27 00:09:19] Checking for CVMFS
[2025-11-27 00:09:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:09:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:09:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:09:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:09:20] 2.13.3.0 11285 31006 344316 153347 2 678 23821847 32935937 56646 16776704 0 227901409 99.609 240306728 37840 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:09:20] CVMFS is ok
[2025-11-27 00:09:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:09:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:09:20] Further information can be found at the LHC@home message board.
[2025-11-27 00:09:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:09:20] Checking for apptainer binary...
[2025-11-27 00:09:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:09:20] Running /usr/bin/apptainer --version
[2025-11-27 00:09:20] apptainer version 1.4.4-1.el9
[2025-11-27 00:09:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:09:21] c7-3-29.aglt2.org
[2025-11-27 00:09:21] apptainer works
[2025-11-27 00:09:21] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:09:21] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:09:21] Starting ATLAS job with PandaID=6898212796
[2025-11-27 00:09:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:49:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:49:28] 2025-11-27 18:48:48,599 | INFO     | monitor loop #3098: job 0:6898212796 is in state 'finished'
[2025-11-27 13:49:28] 2025-11-27 18:48:48,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:49:28] 2025-11-27 18:48:48,951 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:49:28] 2025-11-27 18:48:48,956 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3184.504687500002
[2025-11-27 13:49:28] 2025-11-27 18:48:48,969 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6898212796/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:49:28] 2025-11-27 18:48:48,970 | INFO     | extracted standard info from prmon json
[2025-11-27 13:49:28] 2025-11-27 18:48:48,971 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:49:28] 2025-11-27 18:48:48,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:49:28] 2025-11-27 18:48:48,980 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:49:28] 2025-11-27 18:48:48,981 | INFO     | sum of square deviations: 161155416516.9092
[2025-11-27 13:49:28] 2025-11-27 18:48:48,992 | INFO     | sum of deviations: 2689984124617.1035
[2025-11-27 13:49:28] 2025-11-27 18:48:48,992 | INFO     | mean x: 1764244756.050995
[2025-11-27 13:49:28] 2025-11-27 18:48:48,992 | INFO     | mean y: 3075295.119402985
[2025-11-27 13:49:28] 2025-11-27 18:48:48,992 | INFO     | intersect: -29445456366.354103
[2025-11-27 13:49:28] 2025-11-27 18:48:48,993 | INFO     | chi2: 12.107692738811489
[2025-11-27 13:49:28] 2025-11-27 18:48:48,994 | INFO     | sum of square deviations: 158167570025.38174
[2025-11-27 13:49:28] 2025-11-27 18:48:49,005 | INFO     | sum of deviations: 2980655045660.069
[2025-11-27 13:49:28] 2025-11-27 18:48:49,005 | INFO     | mean x: 1764244603.5544431
[2025-11-27 13:49:28] 2025-11-27 18:48:49,005 | INFO     | mean y: 3090132.9524405506
[2025-11-27 13:49:28] 2025-11-27 18:48:49,005 | INFO     | intersect: -33243956518.38848
[2025-11-27 13:49:28] 2025-11-27 18:48:49,006 | INFO     | chi2: 8.773989359581098
[2025-11-27 13:49:28] 2025-11-27 18:48:49,006 | INFO     | current chi2=8.773989359581098 (change=27.533762634594517 %)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,006 | INFO     | sum of square deviations: 155216838526.45172
[2025-11-27 13:49:28] 2025-11-27 18:48:49,017 | INFO     | sum of deviations: 3092365423859.0645
[2025-11-27 13:49:28] 2025-11-27 18:48:49,017 | INFO     | mean x: 1764244451.056675
[2025-11-27 13:49:28] 2025-11-27 18:48:49,017 | INFO     | mean y: 3095879.554156171
[2025-11-27 13:49:28] 2025-11-27 18:48:49,017 | INFO     | intersect: -35145722969.45965
[2025-11-27 13:49:28] 2025-11-27 18:48:49,018 | INFO     | chi2: 7.399984948595782
[2025-11-27 13:49:28] 2025-11-27 18:48:49,018 | INFO     | current chi2=7.399984948595782 (change=15.659973527149518 %)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,018 | INFO     | right removable region: 793
[2025-11-27 13:49:28] 2025-11-27 18:48:49,019 | INFO     | sum of square deviations: 158167299795.38177
[2025-11-27 13:49:28] 2025-11-27 18:48:49,031 | INFO     | sum of deviations: 2367904299862.169
[2025-11-27 13:49:28] 2025-11-27 18:48:49,031 | INFO     | mean x: 1764244908.5544431
[2025-11-27 13:49:28] 2025-11-27 18:48:49,031 | INFO     | mean y: 3091726.4443053817
[2025-11-27 13:49:28] 2025-11-27 18:48:49,031 | INFO     | intersect: -26409214169.783573
[2025-11-27 13:49:28] 2025-11-27 18:48:49,032 | INFO     | chi2: 8.578334054048167
[2025-11-27 13:49:28] 2025-11-27 18:48:49,032 | INFO     | current chi2=8.578334054048167 (change=29.149721263159257 %)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,032 | INFO     | sum of square deviations: 155216492778.6712
[2025-11-27 13:49:28] 2025-11-27 18:48:49,043 | INFO     | sum of deviations: 2252792554754.7695
[2025-11-27 13:49:28] 2025-11-27 18:48:49,043 | INFO     | mean x: 1764245061.054156
[2025-11-27 13:49:28] 2025-11-27 18:48:49,044 | INFO     | mean y: 3097667.4937027707
[2025-11-27 13:49:28] 2025-11-27 18:48:49,044 | INFO     | intersect: -25602932124.540245
[2025-11-27 13:49:28] 2025-11-27 18:48:49,044 | INFO     | chi2: 8.225439613072968
[2025-11-27 13:49:28] 2025-11-27 18:48:49,044 | INFO     | current chi2=8.225439613072968 (change=4.113787581035803 %)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,044 | INFO     | left removable region: 20
[2025-11-27 13:49:28] 2025-11-27 18:48:49,045 | INFO     | sum of square deviations: 143223612995.6845
[2025-11-27 13:49:28] 2025-11-27 18:48:49,056 | INFO     | sum of deviations: 2508997646803.0166
[2025-11-27 13:49:28] 2025-11-27 18:48:49,056 | INFO     | mean x: 1764245030.567917
[2025-11-27 13:49:28] 2025-11-27 18:48:49,056 | INFO     | mean y: 3124620.742561449
[2025-11-27 13:49:28] 2025-11-27 18:48:49,056 | INFO     | intersect: -30902998591.022774
[2025-11-27 13:49:28] 2025-11-27 18:48:49,057 | INFO     | chi2: 3.3811240549358517
[2025-11-27 13:49:28] 2025-11-27 18:48:49,057 | INFO     | current memory leak: 17.52 B/s (using 773 data points, chi2=3.38)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | could have reported an average CPU frequency of 3180 MHz (30 samples)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | ..............................
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . Timing measurements:
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . get job = 0 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . initial setup = 2 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . payload setup = 17 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . stage-in = 0 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . payload execution = 49054 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,058 | INFO     | . stage-out = 4 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,059 | INFO     | . log creation = 1 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,059 | INFO     | ..............................
[2025-11-27 13:49:28] 2025-11-27 18:48:49,131 | INFO     | 
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | job summary report
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | --------------------------------------------------
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | PanDA job id: 6898212796
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | task id: 47556161
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | errors: (none)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:49:28] 2025-11-27 18:48:49,132 | INFO     | pilot state: finished 
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | transexitcode: 0
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | exeerrorcode: 0
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | exeerrordiag: 
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | exitcode: 0
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | exitmsg: OK
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | cpuconsumptiontime: 191303 s
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | nevents: 1000
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | neventsw: 0
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | pid: 3427180
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | pgrp: 3427180
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | corecount: 9
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | event service: False
[2025-11-27 13:49:28] 2025-11-27 18:48:49,133 | INFO     | sizes: {0: 2284258, 1: 2284258, 11: 2284286, 17: 2284576, 22: 2284604, 49072: 2333312, 49077: 2342306, 49079: 2342362, 49095: 2342608}
[2025-11-27 13:49:28] 2025-11-27 18:48:49,134 | INFO     | --------------------------------------------------
[2025-11-27 13:49:28] 2025-11-27 18:48:49,134 | INFO     | 
[2025-11-27 13:49:28] 2025-11-27 18:48:49,134 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 13:49:28] 2025-11-27 18:48:49,214 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,214 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,215 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,216 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,216 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,216 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,216 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:49:28] 2025-11-27 18:48:49,216 | INFO     | job 6898212796 has completed (purged errors)
[2025-11-27 13:49:28] 2025-11-27 18:48:49,216 | INFO     | overall cleanup function is called
[2025-11-27 13:49:28] 2025-11-27 18:48:50,233 | INFO     | --- collectZombieJob: --- 10, [3427180]
[2025-11-27 13:49:28] 2025-11-27 18:48:50,233 | INFO     | zombie collector waiting for pid 3427180
[2025-11-27 13:49:28] 2025-11-27 18:48:50,234 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:49:28] 2025-11-27 18:48:50,234 | INFO     | collected zombie processes
[2025-11-27 13:49:28] 2025-11-27 18:48:50,234 | INFO     | will attempt to kill all subprocesses of pid=3427180
[2025-11-27 13:49:28] 2025-11-27 18:48:51,111 | INFO     | process IDs to be killed: [3427180] (in reverse order)
[2025-11-27 13:49:28] 2025-11-27 18:48:51,454 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:49:28] 2025-11-27 18:48:51,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:49:28] 2025-11-27 18:48:51,508 | INFO     | did not find any defunct processes belonging to 3427180
[2025-11-27 13:49:28] 2025-11-27 18:48:51,561 | INFO     | did not find any defunct processes belonging to 3427180
[2025-11-27 13:49:28] 2025-11-27 18:48:51,573 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:49:28] 2025-11-27 18:48:51,574 | INFO     | ready for new job
[2025-11-27 13:49:28] 2025-11-27 18:48:51,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:49:28] 2025-11-27 18:48:51,577 | INFO     | ***************************************
[2025-11-27 13:49:28] 2025-11-27 18:48:51,577 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:49:28] 2025-11-27 18:48:51,577 | INFO     | ***************************************
[2025-11-27 13:49:28] 2025-11-27 18:48:51,577 | INFO     | 
[2025-11-27 13:49:28] 2025-11-27 18:48:51,601 | INFO     | architecture information:
[2025-11-27 13:49:28] 2025-11-27 18:48:51,602 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:49:28] 2025-11-27 18:48:51,701 | INFO     | cat /etc/os-release:
[2025-11-27 13:49:28] NAME="CentOS Linux"
[2025-11-27 13:49:28] VERSION="7 (Core)"
[2025-11-27 13:49:28] ID="centos"
[2025-11-27 13:49:28] ID_LIKE="rhel fedora"
[2025-11-27 13:49:28] VERSION_ID="7"
[2025-11-27 13:49:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:49:28] ANSI_COLOR="0;31"
[2025-11-27 13:49:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:49:28] HOME_URL="https://www.centos.org/"
[2025-11-27 13:49:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:49:28] 
[2025-11-27 13:49:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:49:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:49:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:49:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:49:28] 
[2025-11-27 13:49:28] 2025-11-27 18:48:51,701 | INFO     | ***************************************
[2025-11-27 13:49:28] 2025-11-27 18:48:52,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 13:49:28] 2025-11-27 18:48:52,277 | INFO     | sufficient remaining disk space (66891808768 B)
[2025-11-27 13:49:28] 2025-11-27 18:48:52,277 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:49:28] 2025-11-27 18:48:52,278 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:49:28] 2025-11-27 18:48:52,278 | INFO     | update_server=False
[2025-11-27 13:49:28] 2025-11-27 18:48:52,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:49:28] 2025-11-27 18:48:52,278 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:49:28] 2025-11-27 18:48:52,278 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:49:28] 2025-11-27 18:48:52,278 | INFO     | aborting loop
[2025-11-27 13:49:28] 2025-11-27 18:48:52,508 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:49:28] 2025-11-27 18:48:52,665 | INFO     | all job control threads have been joined
[2025-11-27 13:49:28] 2025-11-27 18:48:53,096 | INFO     | all data control threads have been joined
[2025-11-27 13:49:28] 2025-11-27 18:48:53,283 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:53,284 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:53,455 | INFO     | all payload control threads have been joined
[2025-11-27 13:49:28] 2025-11-27 18:48:53,629 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:53,671 | INFO     | [job] control thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:53,808 | INFO     | [job] validate thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:53,849 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,102 | INFO     | [data] control thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:49:28] 2025-11-27 18:48:54,278 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,287 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,392 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,463 | INFO     | [payload] control thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,481 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:54,568 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:55,163 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:48:56,523 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:49:02,947 | INFO     | job.realtimelogging is not enabled
[2025-11-27 13:49:28] 2025-11-27 18:49:03,953 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:49:28] 2025-11-27 18:49:19,698 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:49:28] 2025-11-27 18:49:21,432 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140095413724992)>', '<ExcThread(monitor, started 140095132763904)>']
[2025-11-27 13:49:28] 2025-11-27 18:49:21,805 | INFO     | PID=3404945 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:49:28] 2025-11-27 18:49:21,805 | INFO     | .. there are 74 such processes running
[2025-11-27 13:49:28] 2025-11-27 18:49:21,806 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:49:28] 2025-11-27 18:49:21,806 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:49:28] 2025-11-27 18:49:21,806 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:49:28] 2025-11-27 18:49:21,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:49:28] 2025-11-27 18:49:21,807 | INFO     | [monitor] control thread has ended
[2025-11-27 13:49:28] 2025-11-27 18:49:26,462 | INFO     | all workflow threads have been joined
[2025-11-27 13:49:28] 2025-11-27 18:49:26,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:49:28] 2025-11-27 18:49:26,463 | INFO     | traces error code: 0
[2025-11-27 13:49:28] 2025-11-27 18:49:26,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:49:28] 2025-11-27 18:49:27,040 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:49:28] 2025-11-27 18:49:27,095 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:49:28] 2025-11-27 18:49:27,142 [wrapper] pilotpid: 3404945
[2025-11-27 13:49:28] 2025-11-27 18:49:27,184 [wrapper] Pilot exit status: 0
[2025-11-27 13:49:28] 2025-11-27 18:49:27,255 [wrapper] pandaids: 6898212796
[2025-11-27 13:49:28] 2025-11-27 18:49:27,417 [wrapper] cleanup supervisor_pilot 3720231 3404946
[2025-11-27 13:49:28] 2025-11-27 18:49:27,420 [wrapper] Test setup, not cleaning
[2025-11-27 13:49:28] 2025-11-27 18:49:27,423 [wrapper] apfmon messages muted
[2025-11-27 13:49:28] 2025-11-27 18:49:27,428 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:49:28] 2025-11-27 18:49:27,439 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:49:28]  *** Error codes and diagnostics ***
[2025-11-27 13:49:28]     "exeErrorCode": 0,
[2025-11-27 13:49:28]     "exeErrorDiag": "",
[2025-11-27 13:49:28]     "pilotErrorCode": 0,
[2025-11-27 13:49:28]     "pilotErrorDiag": "",
[2025-11-27 13:49:28]  *** Listing of results directory ***
[2025-11-27 13:49:28] total 1300620
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:21 queuedata.json
[2025-11-27 13:49:28] -rwx------. 1 boincer umatlas     36292 Nov 25 23:22 runpilot2-wrapper.sh
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:49:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:09 run_atlas
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:09 job.xml
[2025-11-27 13:49:28] -rw-r--r--. 2 boincer umatlas 408715365 Nov 27 00:09 EVNT.47483658._002483.pool.root.1
[2025-11-27 13:49:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:09 start_atlas.sh
[2025-11-27 13:49:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:09 shared
[2025-11-27 13:49:28] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:09 input.tar.gz
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:09 boinc_lockfile
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas      2782 Nov 27 00:09 pandaJob.out
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas        57 Nov 27 00:09 setup.sh.local
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas    991570 Nov 27 00:09 agis_schedconf.cvmfs.json
[2025-11-27 13:49:28] drwx------. 5 boincer umatlas      4096 Nov 27 00:09 pilot3
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas       532 Nov 27 13:37 boinc_task_state.xml
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas      6945 Nov 27 13:45 init_data.xml
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas 902053049 Nov 27 13:47 HITS.47556161._004651.pool.root.1
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas      1071 Nov 27 13:48 memory_monitor_summary.json
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:48 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas   2125496 Nov 27 13:48 log.47556161._004651.job.log.tgz.1
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas      8624 Nov 27 13:48 heartbeat.json
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas        95 Nov 27 13:49 pilot_heartbeat.json
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas        29 Nov 27 13:49 wrapper_checkpoint.txt
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:49 boinc_mmap_file
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas      4896 Nov 27 13:49 pilotlog.txt
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas   6443633 Nov 27 13:49 log.47556161._004651.job.log.1
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas       353 Nov 27 13:49 output.list
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:49 runtime_log
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas   8591360 Nov 27 13:49 result.tar.gz
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 13:49 runtime_log.err
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas       664 Nov 27 13:49 jgKLDm2DMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOwMKDmvtpg7m.diag
[2025-11-27 13:49:28] -rw-r--r--. 1 boincer umatlas     21329 Nov 27 13:49 stderr.txt
[2025-11-27 13:49:28] HITS file was successfully produced:
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas 902053049 Nov 27 13:47 shared/HITS.pool.root.1
[2025-11-27 13:49:28]  *** Contents of shared directory: ***
[2025-11-27 13:49:28] total 1289048
[2025-11-27 13:49:28] -rw-r--r--. 2 boincer umatlas 408715365 Nov 27 00:09 ATLAS.root_0
[2025-11-27 13:49:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:09 start_atlas.sh
[2025-11-27 13:49:28] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:09 input.tar.gz
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas 902053049 Nov 27 13:47 HITS.pool.root.1
[2025-11-27 13:49:28] -rw-------. 1 boincer umatlas   8591360 Nov 27 13:49 result.tar.gz
13:49:30 (3393276): run_atlas exited; CPU time 192921.893502
13:49:30 (3393276): called boinc_finish(0)

</stderr_txt>
]]>

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