Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:23 (3601978): wrapper (7.7.26015): starting
00:03:23 (3601978): wrapper: running run_atlas (--nthreads 9)
[2025-11-28 00:03:23] Arguments: --nthreads 9
[2025-11-28 00:03:23] Threads: 9
[2025-11-28 00:03:23] Checking for CVMFS
[2025-11-28 00:03:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 00:03:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 00:03:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 00:03:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 00:03:25] 2.13.3.0 11393 32486 334852 153397 1 347 18286712 32935937 14644 16776704 0 99903688 99.400 156388925 40885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-28 00:03:25] CVMFS is ok
[2025-11-28 00:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 00:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 00:03:26] Further information can be found at the LHC@home message board.
[2025-11-28 00:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 00:03:26] Checking for apptainer binary...
[2025-11-28 00:03:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 00:03:26] Running /usr/bin/apptainer --version
[2025-11-28 00:03:26] apptainer version 1.4.4-1.el9
[2025-11-28 00:03:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 00:03:26] c6-5-37-2.aglt2.org
[2025-11-28 00:03:26] apptainer works
[2025-11-28 00:03:26] Set ATHENA_PROC_NUMBER=9
[2025-11-28 00:03:26] Set ATHENA_CORE_NUMBER=9
[2025-11-28 00:03:26] Starting ATLAS job with PandaID=6897531720
[2025-11-28 00:03:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 12:57:28]  *** The last 200 lines of the pilot log: ***
[2025-11-28 12:57:28] 2025-11-28 17:56:54,884 | INFO     | time since job start (46373s) is within the limit (172800.0s)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,021 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 12:57:28] 2025-11-28 17:56:55,032 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2970.2776428571437
[2025-11-28 12:57:28] 2025-11-28 17:56:55,044 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897531720/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,045 | INFO     | extracted standard info from prmon json
[2025-11-28 12:57:28] 2025-11-28 17:56:55,046 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 12:57:28] 2025-11-28 17:56:55,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 12:57:28] 2025-11-28 17:56:55,064 | INFO     | fitting pss+swap vs Time
[2025-11-28 12:57:28] 2025-11-28 17:56:55,067 | INFO     | sum of square deviations: 135578541368.11853
[2025-11-28 12:57:28] 2025-11-28 17:56:55,090 | INFO     | sum of deviations: 1549875189894.58
[2025-11-28 12:57:28] 2025-11-28 17:56:55,091 | INFO     | mean x: 1764329449.6126482
[2025-11-28 12:57:28] 2025-11-28 17:56:55,091 | INFO     | mean y: 3005503.5019762847
[2025-11-28 12:57:28] 2025-11-28 17:56:55,091 | INFO     | intersect: -20166044946.23256
[2025-11-28 12:57:28] 2025-11-28 17:56:55,092 | INFO     | chi2: 8.347022302269492
[2025-11-28 12:57:28] 2025-11-28 17:56:55,094 | INFO     | sum of square deviations: 132917263681.26205
[2025-11-28 12:57:28] 2025-11-28 17:56:55,108 | INFO     | sum of deviations: 1844774690893.4426
[2025-11-28 12:57:28] 2025-11-28 17:56:55,108 | INFO     | mean x: 1764329297.1299734
[2025-11-28 12:57:28] 2025-11-28 17:56:55,109 | INFO     | mean y: 3022402.2811671086
[2025-11-28 12:57:28] 2025-11-28 17:56:55,109 | INFO     | intersect: -24484316139.025517
[2025-11-28 12:57:28] 2025-11-28 17:56:55,110 | INFO     | chi2: 4.533124806719345
[2025-11-28 12:57:28] 2025-11-28 17:56:55,110 | INFO     | current chi2=4.533124806719345 (change=45.69171325339789 %)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,111 | INFO     | sum of square deviations: 130290872946.10683
[2025-11-28 12:57:28] 2025-11-28 17:56:55,125 | INFO     | sum of deviations: 1877811151304.8394
[2025-11-28 12:57:28] 2025-11-28 17:56:55,126 | INFO     | mean x: 1764329144.6421895
[2025-11-28 12:57:28] 2025-11-28 17:56:55,126 | INFO     | mean y: 3024307.6822429905
[2025-11-28 12:57:28] 2025-11-28 17:56:55,126 | INFO     | intersect: -25425287495.49099
[2025-11-28 12:57:28] 2025-11-28 17:56:55,127 | INFO     | chi2: 4.250547831145772
[2025-11-28 12:57:28] 2025-11-28 17:56:55,127 | INFO     | current chi2=4.250547831145772 (change=6.233602374122052 %)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,127 | INFO     | right removable region: 748
[2025-11-28 12:57:28] 2025-11-28 17:56:55,128 | INFO     | sum of square deviations: 132916054051.2621
[2025-11-28 12:57:28] 2025-11-28 17:56:55,143 | INFO     | sum of deviations: 1257141140654.614
[2025-11-28 12:57:28] 2025-11-28 17:56:55,143 | INFO     | mean x: 1764329602.1299734
[2025-11-28 12:57:28] 2025-11-28 17:56:55,143 | INFO     | mean y: 3022263.1366047747
[2025-11-28 12:57:28] 2025-11-28 17:56:55,143 | INFO     | intersect: -16684287214.595478
[2025-11-28 12:57:28] 2025-11-28 17:56:55,145 | INFO     | chi2: 4.824072947996815
[2025-11-28 12:57:28] 2025-11-28 17:56:55,145 | INFO     | current chi2=4.824072947996815 (change=42.20606135573417 %)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,146 | INFO     | sum of square deviations: 130288958650.94797
[2025-11-28 12:57:28] 2025-11-28 17:56:55,159 | INFO     | sum of deviations: 1158330577526.4485
[2025-11-28 12:57:28] 2025-11-28 17:56:55,160 | INFO     | mean x: 1764329754.6381843
[2025-11-28 12:57:28] 2025-11-28 17:56:55,160 | INFO     | mean y: 3027992.005340454
[2025-11-28 12:57:28] 2025-11-28 17:56:55,160 | INFO     | intersect: -15682699523.188639
[2025-11-28 12:57:28] 2025-11-28 17:56:55,161 | INFO     | chi2: 4.479072467421977
[2025-11-28 12:57:28] 2025-11-28 17:56:55,161 | INFO     | current chi2=4.479072467421977 (change=7.151643109337701 %)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,162 | INFO     | left removable region: 20
[2025-11-28 12:57:28] 2025-11-28 17:56:55,163 | INFO     | sum of square deviations: 119636981464.30774
[2025-11-28 12:57:28] 2025-11-28 17:56:55,181 | INFO     | sum of deviations: 1347762562135.2312
[2025-11-28 12:57:28] 2025-11-28 17:56:55,181 | INFO     | mean x: 1764329724.1153846
[2025-11-28 12:57:28] 2025-11-28 17:56:55,181 | INFO     | mean y: 3055251.89010989
[2025-11-28 12:57:28] 2025-11-28 17:56:55,181 | INFO     | intersect: -19872885450.730457
[2025-11-28 12:57:28] 2025-11-28 17:56:55,182 | INFO     | chi2: 0.17585942245286462
[2025-11-28 12:57:28] 2025-11-28 17:56:55,183 | INFO     | current memory leak: 11.27 B/s (using 728 data points, chi2=0.18)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,184 | INFO     | could have reported an average CPU frequency of 2899 MHz (29 samples)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | ..............................
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . Timing measurements:
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . get job = 0 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . initial setup = 5 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . payload setup = 28 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . stage-in = 0 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . payload execution = 46288 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . stage-out = 4 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | . log creation = 0 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,185 | INFO     | ..............................
[2025-11-28 12:57:28] 2025-11-28 17:56:55,607 | INFO     | 
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | job summary report
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | --------------------------------------------------
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | PanDA job id: 6897531720
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | task id: 47556161
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | errors: (none)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | pilot state: finished 
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | transexitcode: 0
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | exeerrorcode: 0
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | exeerrordiag: 
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | exitcode: 0
[2025-11-28 12:57:28] 2025-11-28 17:56:55,613 | INFO     | exitmsg: OK
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | cpuconsumptiontime: 230685 s
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | nevents: 1000
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | neventsw: 0
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | pid: 3622457
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | pgrp: 3622457
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | corecount: 9
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | event service: False
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | sizes: {0: 2284265, 11: 2284265, 22: 2284583, 46320: 2331365, 46325: 2340359, 46326: 2340415, 46334: 2340789}
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | --------------------------------------------------
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | 
[2025-11-28 12:57:28] 2025-11-28 17:56:55,614 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-28 12:57:28] 2025-11-28 17:56:55,706 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,707 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,709 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 12:57:28] 2025-11-28 17:56:55,709 | INFO     | job 6897531720 has completed (purged errors)
[2025-11-28 12:57:28] 2025-11-28 17:56:55,709 | INFO     | overall cleanup function is called
[2025-11-28 12:57:28] 2025-11-28 17:56:56,726 | INFO     | --- collectZombieJob: --- 10, [3622457]
[2025-11-28 12:57:28] 2025-11-28 17:56:56,726 | INFO     | zombie collector waiting for pid 3622457
[2025-11-28 12:57:28] 2025-11-28 17:56:56,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 12:57:28] 2025-11-28 17:56:56,726 | INFO     | collected zombie processes
[2025-11-28 12:57:28] 2025-11-28 17:56:56,726 | INFO     | will attempt to kill all subprocesses of pid=3622457
[2025-11-28 12:57:28] 2025-11-28 17:56:57,034 | INFO     | process IDs to be killed: [3622457] (in reverse order)
[2025-11-28 12:57:28] 2025-11-28 17:56:57,270 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 12:57:28] 2025-11-28 17:56:57,270 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 12:57:28] 2025-11-28 17:56:57,284 | INFO     | did not find any defunct processes belonging to 3622457
[2025-11-28 12:57:28] 2025-11-28 17:56:57,298 | INFO     | did not find any defunct processes belonging to 3622457
[2025-11-28 12:57:28] 2025-11-28 17:56:57,299 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 12:57:28] 2025-11-28 17:56:57,299 | INFO     | ready for new job
[2025-11-28 12:57:28] 2025-11-28 17:56:57,300 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 12:57:28] 2025-11-28 17:56:57,304 | INFO     | ***************************************
[2025-11-28 12:57:28] 2025-11-28 17:56:57,305 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 12:57:28] 2025-11-28 17:56:57,305 | INFO     | ***************************************
[2025-11-28 12:57:28] 2025-11-28 17:56:57,305 | INFO     | 
[2025-11-28 12:57:28] 2025-11-28 17:56:57,308 | INFO     | architecture information:
[2025-11-28 12:57:28] 2025-11-28 17:56:57,309 | INFO     | executing command: cat /etc/os-release
[2025-11-28 12:57:28] 2025-11-28 17:56:57,327 | INFO     | cat /etc/os-release:
[2025-11-28 12:57:28] NAME="CentOS Linux"
[2025-11-28 12:57:28] VERSION="7 (Core)"
[2025-11-28 12:57:28] ID="centos"
[2025-11-28 12:57:28] ID_LIKE="rhel fedora"
[2025-11-28 12:57:28] VERSION_ID="7"
[2025-11-28 12:57:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 12:57:28] ANSI_COLOR="0;31"
[2025-11-28 12:57:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 12:57:28] HOME_URL="https://www.centos.org/"
[2025-11-28 12:57:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 12:57:28] 
[2025-11-28 12:57:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 12:57:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 12:57:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 12:57:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 12:57:28] 
[2025-11-28 12:57:28] 2025-11-28 17:56:57,328 | INFO     | ***************************************
[2025-11-28 12:57:28] 2025-11-28 17:56:57,832 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-28 12:57:28] 2025-11-28 17:56:57,859 | INFO     | sufficient remaining disk space (71002226688 B)
[2025-11-28 12:57:28] 2025-11-28 17:56:57,859 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 12:57:28] 2025-11-28 17:56:57,860 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 12:57:28] 2025-11-28 17:56:57,860 | INFO     | update_server=False
[2025-11-28 12:57:28] 2025-11-28 17:56:57,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 12:57:28] 2025-11-28 17:56:57,860 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 12:57:28] 2025-11-28 17:56:57,860 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 12:57:28] 2025-11-28 17:56:57,921 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-28 12:57:28] 2025-11-28 17:56:57,922 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-28 12:57:28] 2025-11-28 17:56:57,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 12:57:28] 2025-11-28 17:56:57,922 | INFO     | will abort loop
[2025-11-28 12:57:28] 2025-11-28 17:56:58,654 | INFO     | all data control threads have been joined
[2025-11-28 12:57:28] 2025-11-28 17:56:58,654 | INFO     | all payload control threads have been joined
[2025-11-28 12:57:28] 2025-11-28 17:56:58,865 | INFO     | [job] retrieve thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:58,927 | INFO     | [job] job monitor thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,305 | INFO     | [job] validate thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,462 | INFO     | all job control threads have been joined
[2025-11-28 12:57:28] 2025-11-28 17:56:59,562 | INFO     | [data] copytool_in thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,660 | INFO     | [data] control thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,664 | INFO     | [payload] control thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,866 | INFO     | [data] copytool_out thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:56:59,904 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:00,004 | INFO     | [payload] failed_post thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:00,098 | INFO     | [payload] validate_post thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:00,137 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:00,189 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:00,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 12:57:28] 2025-11-28 17:57:00,470 | INFO     | [job] control thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:01,334 | INFO     | [job] queue monitor thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:01,869 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 12:57:28] 2025-11-28 17:57:21,863 | INFO     | [monitor] cgroup control has ended
[2025-11-28 12:57:28] 2025-11-28 17:57:22,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140195590330176)>', '<ExcThread(monitor, started 140195114514176)>']
[2025-11-28 12:57:28] 2025-11-28 17:57:27,940 | INFO     | all workflow threads have been joined
[2025-11-28 12:57:28] 2025-11-28 17:57:27,940 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 12:57:28] 2025-11-28 17:57:27,940 | INFO     | traces error code: 0
[2025-11-28 12:57:28] 2025-11-28 17:57:27,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 12:57:28] 2025-11-28 17:57:28,471 | INFO     | PID=3606237 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 12:57:28] 2025-11-28 17:57:28,471 | INFO     | .. there are 25 such processes running
[2025-11-28 12:57:28] 2025-11-28 17:57:28,472 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 12:57:28] 2025-11-28 17:57:28,472 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 12:57:28] 2025-11-28 17:57:28,472 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 12:57:28] 2025-11-28 17:57:28,472 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 12:57:28] 2025-11-28 17:57:28,472 | INFO     | [monitor] control thread has ended
[2025-11-28 12:57:28] 2025-11-28 17:57:28,697 [wrapper] ==== pilot stdout END ====
[2025-11-28 12:57:28] 2025-11-28 17:57:28,700 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 12:57:28] 2025-11-28 17:57:28,704 [wrapper] pilotpid: 3606237
[2025-11-28 12:57:28] 2025-11-28 17:57:28,707 [wrapper] Pilot exit status: 0
[2025-11-28 12:57:28] 2025-11-28 17:57:28,721 [wrapper] pandaids: 6897531720
[2025-11-28 12:57:28] 2025-11-28 17:57:28,794 [wrapper] cleanup supervisor_pilot 1200560 3606238
[2025-11-28 12:57:28] 2025-11-28 17:57:28,797 [wrapper] Test setup, not cleaning
[2025-11-28 12:57:28] 2025-11-28 17:57:28,814 [wrapper] apfmon messages muted
[2025-11-28 12:57:28] 2025-11-28 17:57:28,818 [wrapper] ==== wrapper stdout END ====
[2025-11-28 12:57:28] 2025-11-28 17:57:28,822 [wrapper] ==== wrapper stderr END ====
[2025-11-28 12:57:28]  *** Error codes and diagnostics ***
[2025-11-28 12:57:28]     "exeErrorCode": 0,
[2025-11-28 12:57:28]     "exeErrorDiag": "",
[2025-11-28 12:57:28]     "pilotErrorCode": 0,
[2025-11-28 12:57:28]     "pilotErrorDiag": "",
[2025-11-28 12:57:28]  *** Listing of results directory ***
[2025-11-28 12:57:28] total 1309500
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-28 12:57:28] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas       100 Nov 28 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 12:57:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 00:03 run_atlas
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas       105 Nov 28 00:03 job.xml
[2025-11-28 12:57:28] -rw-r--r--. 2 boincer umatlas 411787625 Nov 28 00:03 EVNT.47483658._002308.pool.root.1
[2025-11-28 12:57:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 00:03 start_atlas.sh
[2025-11-28 12:57:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 00:03 shared
[2025-11-28 12:57:28] -rw-r--r--. 2 boincer umatlas    590104 Nov 28 00:03 input.tar.gz
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas         0 Nov 28 00:03 boinc_lockfile
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas      2786 Nov 28 00:03 pandaJob.out
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas        57 Nov 28 00:03 setup.sh.local
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas    991858 Nov 28 00:03 agis_schedconf.cvmfs.json
[2025-11-28 12:57:28] drwx------. 5 boincer umatlas      4096 Nov 28 00:04 pilot3
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas       533 Nov 28 12:48 boinc_task_state.xml
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas      6842 Nov 28 12:54 init_data.xml
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas 908592914 Nov 28 12:56 HITS.47556161._002915.pool.root.1
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas      1056 Nov 28 12:56 memory_monitor_summary.json
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas   1516240 Nov 28 12:56 agis_ddmendpoints.agis.ALL.json
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas   2101140 Nov 28 12:56 log.47556161._002915.job.log.tgz.1
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas        95 Nov 28 12:56 pilot_heartbeat.json
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas      8623 Nov 28 12:56 heartbeat.json
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 12:57 boinc_mmap_file
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas        29 Nov 28 12:57 wrapper_checkpoint.txt
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas       823 Nov 28 12:57 pilotlog.txt
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas   6210090 Nov 28 12:57 log.47556161._002915.job.log.1
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas       353 Nov 28 12:57 output.list
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas       620 Nov 28 12:57 runtime_log
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas   8335360 Nov 28 12:57 result.tar.gz
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas      9348 Nov 28 12:57 runtime_log.err
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas       661 Nov 28 12:57 8USLDmKbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8bMKDmeRfBPn.diag
[2025-11-28 12:57:28] -rw-r--r--. 1 boincer umatlas     21307 Nov 28 12:57 stderr.txt
[2025-11-28 12:57:28] HITS file was successfully produced:
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas 908592914 Nov 28 12:56 shared/HITS.pool.root.1
[2025-11-28 12:57:28]  *** Contents of shared directory: ***
[2025-11-28 12:57:28] total 1298184
[2025-11-28 12:57:28] -rw-r--r--. 2 boincer umatlas 411787625 Nov 28 00:03 ATLAS.root_0
[2025-11-28 12:57:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 00:03 start_atlas.sh
[2025-11-28 12:57:28] -rw-r--r--. 2 boincer umatlas    590104 Nov 28 00:03 input.tar.gz
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas 908592914 Nov 28 12:56 HITS.pool.root.1
[2025-11-28 12:57:28] -rw-------. 1 boincer umatlas   8335360 Nov 28 12:57 result.tar.gz
12:57:30 (3601978): run_atlas exited; CPU time 231424.464408
12:57:30 (3601978): called boinc_finish(0)

</stderr_txt>
]]>

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