Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:31 (4056749): wrapper (7.7.26015): starting
00:05:31 (4056749): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:05:31] Arguments: --nthreads 8
[2025-11-27 00:05:31] Threads: 8
[2025-11-27 00:05:31] Checking for CVMFS
[2025-11-27 00:05:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:05:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:05:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:05:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:05:32] 2.13.3.0 12537 31045 368036 153347 1 426 38723447 40960001 40747 16776704 43 186636367 99.717 139261119 36833 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:05:32] CVMFS is ok
[2025-11-27 00:05:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:05:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:05:32] Further information can be found at the LHC@home message board.
[2025-11-27 00:05:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:05:32] Checking for apptainer binary...
[2025-11-27 00:05:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:05:32] Running /usr/bin/apptainer --version
[2025-11-27 00:05:32] apptainer version 1.4.4-1.el9
[2025-11-27 00:05:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:05:32] c7-11-14.aglt2.org
[2025-11-27 00:05:32] apptainer works
[2025-11-27 00:05:32] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:05:32] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:05:32] Starting ATLAS job with PandaID=6897510400
[2025-11-27 00:05:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:59:01]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:59:01] 2025-11-27 22:58:04,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:59:01] 2025-11-27 22:58:04,420 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:59:01] 2025-11-27 22:58:04,421 | INFO     | sum of square deviations: 363088026152.96857
[2025-11-27 17:59:01] 2025-11-27 22:58:04,438 | INFO     | sum of deviations: 3390425282318.467
[2025-11-27 17:59:01] 2025-11-27 22:58:04,438 | INFO     | mean x: 1764252143.7865274
[2025-11-27 17:59:01] 2025-11-27 22:58:04,438 | INFO     | mean y: 2801756.5398481973
[2025-11-27 17:59:01] 2025-11-27 22:58:04,438 | INFO     | intersect: -16471344020.325764
[2025-11-27 17:59:01] 2025-11-27 22:58:04,439 | INFO     | chi2: 9.502837617284532
[2025-11-27 17:59:01] 2025-11-27 22:58:04,441 | INFO     | sum of square deviations: 357945766557.1549
[2025-11-27 17:59:01] 2025-11-27 22:58:04,460 | INFO     | sum of deviations: 3695342330241.3887
[2025-11-27 17:59:01] 2025-11-27 22:58:04,460 | INFO     | mean x: 1764251991.2926598
[2025-11-27 17:59:01] 2025-11-27 22:58:04,460 | INFO     | mean y: 2810793.02478551
[2025-11-27 17:59:01] 2025-11-27 22:58:04,460 | INFO     | intersect: -18210884335.55114
[2025-11-27 17:59:01] 2025-11-27 22:58:04,461 | INFO     | chi2: 6.790639342043016
[2025-11-27 17:59:01] 2025-11-27 22:58:04,461 | INFO     | current chi2=6.790639342043016 (change=28.540930451219648 %)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,462 | INFO     | sum of square deviations: 352852170720.95013
[2025-11-27 17:59:01] 2025-11-27 22:58:04,479 | INFO     | time since job start (64323s) is within the limit (172800.0s)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,480 | INFO     | sum of deviations: 3651240529530.661
[2025-11-27 17:59:01] 2025-11-27 22:58:04,481 | INFO     | mean x: 1764251838.7969348
[2025-11-27 17:59:01] 2025-11-27 22:58:04,481 | INFO     | mean y: 2809471.2059386973
[2025-11-27 17:59:01] 2025-11-27 22:58:04,481 | INFO     | intersect: -18253299893.09985
[2025-11-27 17:59:01] 2025-11-27 22:58:04,481 | INFO     | chi2: 6.778463045187063
[2025-11-27 17:59:01] 2025-11-27 22:58:04,482 | INFO     | current chi2=6.778463045187063 (change=0.1793100213784748 %)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,482 | INFO     | right removable region: 1043
[2025-11-27 17:59:01] 2025-11-27 22:58:04,482 | INFO     | sum of square deviations: 357944939397.15533
[2025-11-27 17:59:01] 2025-11-27 22:58:04,499 | INFO     | sum of deviations: 3018235335971.42
[2025-11-27 17:59:01] 2025-11-27 22:58:04,500 | INFO     | mean x: 1764252296.2926598
[2025-11-27 17:59:01] 2025-11-27 22:58:04,500 | INFO     | mean y: 2812790.197330791
[2025-11-27 17:59:01] 2025-11-27 22:58:04,500 | INFO     | intersect: -14873577503.816542
[2025-11-27 17:59:01] 2025-11-27 22:58:04,500 | INFO     | chi2: 6.105944826909465
[2025-11-27 17:59:01] 2025-11-27 22:58:04,501 | INFO     | current chi2=6.105944826909465 (change=35.746088980795825 %)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,501 | INFO     | sum of square deviations: 352850644253.75854
[2025-11-27 17:59:01] 2025-11-27 22:58:04,518 | INFO     | sum of deviations: 2668895635742.7725
[2025-11-27 17:59:01] 2025-11-27 22:58:04,518 | INFO     | mean x: 1764252448.7988505
[2025-11-27 17:59:01] 2025-11-27 22:58:04,518 | INFO     | mean y: 2823249.813218391
[2025-11-27 17:59:01] 2025-11-27 22:58:04,518 | INFO     | intersect: -13341649086.083885
[2025-11-27 17:59:01] 2025-11-27 22:58:04,519 | INFO     | chi2: 3.2177229216189227
[2025-11-27 17:59:01] 2025-11-27 22:58:04,519 | INFO     | current chi2=3.2177229216189227 (change=47.301801558407156 %)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,520 | INFO     | sum of square deviations: 347805226098.30994
[2025-11-27 17:59:01] 2025-11-27 22:58:04,536 | INFO     | sum of deviations: 2547368856219.0464
[2025-11-27 17:59:01] 2025-11-27 22:58:04,536 | INFO     | mean x: 1764252601.3002887
[2025-11-27 17:59:01] 2025-11-27 22:58:04,536 | INFO     | mean y: 2826919.176130895
[2025-11-27 17:59:01] 2025-11-27 22:58:04,536 | INFO     | intersect: -12918779180.51333
[2025-11-27 17:59:01] 2025-11-27 22:58:04,537 | INFO     | chi2: 2.89231809213285
[2025-11-27 17:59:01] 2025-11-27 22:58:04,537 | INFO     | current chi2=2.89231809213285 (change=10.11289155134441 %)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,537 | INFO     | left removable region: 30
[2025-11-27 17:59:01] 2025-11-27 22:58:04,538 | INFO     | sum of square deviations: 322343938199.8008
[2025-11-27 17:59:01] 2025-11-27 22:58:04,554 | INFO     | sum of deviations: 2631872415611.5117
[2025-11-27 17:59:01] 2025-11-27 22:58:04,555 | INFO     | mean x: 1764252723.3129318
[2025-11-27 17:59:01] 2025-11-27 22:58:04,555 | INFO     | mean y: 2840023.12142152
[2025-11-27 17:59:01] 2025-11-27 22:58:04,555 | INFO     | intersect: -14401923108.415152
[2025-11-27 17:59:01] 2025-11-27 22:58:04,556 | INFO     | chi2: 0.06661026365051637
[2025-11-27 17:59:01] 2025-11-27 22:58:04,556 | INFO     | current memory leak: 8.16 B/s (using 1013 data points, chi2=0.07)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,556 | INFO     | could have reported an average CPU frequency of 3290 MHz (39 samples)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | ..............................
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . Timing measurements:
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . get job = 0 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . initial setup = 3 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . payload setup = 20 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . stage-in = 0 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . payload execution = 64255 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . stage-out = 3 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | . log creation = 0 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,557 | INFO     | ..............................
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | 
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | job summary report
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | --------------------------------------------------
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | PanDA job id: 6897510400
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | task id: 47556161
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | errors: (none)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,923 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | pilot state: finished 
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | transexitcode: 0
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | exeerrorcode: 0
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | exeerrordiag: 
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | exitcode: 0
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | exitmsg: OK
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | cpuconsumptiontime: 199391 s
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | nevents: 1000
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | neventsw: 0
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | pid: 4093841
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | pgrp: 4093841
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | corecount: 8
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | event service: False
[2025-11-27 17:59:01] 2025-11-27 22:58:04,924 | INFO     | sizes: {0: 2284038, 1: 2284293, 12: 2284293, 15: 2284583, 23: 2284611, 64279: 2339647, 64280: 2339774, 64284: 2348880, 64291: 2349070}
[2025-11-27 17:59:01] 2025-11-27 22:58:04,925 | INFO     | --------------------------------------------------
[2025-11-27 17:59:01] 2025-11-27 22:58:04,925 | INFO     | 
[2025-11-27 17:59:01] 2025-11-27 22:58:04,925 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 17:59:01] 2025-11-27 22:58:04,946 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,946 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,946 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,947 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | job 6897510400 has completed (purged errors)
[2025-11-27 17:59:01] 2025-11-27 22:58:04,948 | INFO     | overall cleanup function is called
[2025-11-27 17:59:01] 2025-11-27 22:58:05,966 | INFO     | --- collectZombieJob: --- 10, [4093841]
[2025-11-27 17:59:01] 2025-11-27 22:58:05,966 | INFO     | zombie collector waiting for pid 4093841
[2025-11-27 17:59:01] 2025-11-27 22:58:05,966 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:59:01] 2025-11-27 22:58:05,966 | INFO     | collected zombie processes
[2025-11-27 17:59:01] 2025-11-27 22:58:05,966 | INFO     | will attempt to kill all subprocesses of pid=4093841
[2025-11-27 17:59:01] 2025-11-27 22:58:06,373 | INFO     | process IDs to be killed: [4093841] (in reverse order)
[2025-11-27 17:59:01] 2025-11-27 22:58:06,508 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:59:01] 2025-11-27 22:58:06,509 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:59:01] 2025-11-27 22:58:06,528 | INFO     | did not find any defunct processes belonging to 4093841
[2025-11-27 17:59:01] 2025-11-27 22:58:06,542 | INFO     | did not find any defunct processes belonging to 4093841
[2025-11-27 17:59:01] 2025-11-27 22:58:06,543 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:59:01] 2025-11-27 22:58:06,543 | INFO     | ready for new job
[2025-11-27 17:59:01] 2025-11-27 22:58:06,543 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:59:01] 2025-11-27 22:58:06,547 | INFO     | ***************************************
[2025-11-27 17:59:01] 2025-11-27 22:58:06,547 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:59:01] 2025-11-27 22:58:06,547 | INFO     | ***************************************
[2025-11-27 17:59:01] 2025-11-27 22:58:06,547 | INFO     | 
[2025-11-27 17:59:01] 2025-11-27 22:58:06,550 | INFO     | architecture information:
[2025-11-27 17:59:01] 2025-11-27 22:58:06,550 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:59:01] 2025-11-27 22:58:06,561 | INFO     | cat /etc/os-release:
[2025-11-27 17:59:01] NAME="CentOS Linux"
[2025-11-27 17:59:01] VERSION="7 (Core)"
[2025-11-27 17:59:01] ID="centos"
[2025-11-27 17:59:01] ID_LIKE="rhel fedora"
[2025-11-27 17:59:01] VERSION_ID="7"
[2025-11-27 17:59:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:59:01] ANSI_COLOR="0;31"
[2025-11-27 17:59:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:59:01] HOME_URL="https://www.centos.org/"
[2025-11-27 17:59:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:59:01] 
[2025-11-27 17:59:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:59:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:59:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:59:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:59:01] 
[2025-11-27 17:59:01] 2025-11-27 22:58:06,562 | INFO     | ***************************************
[2025-11-27 17:59:01] 2025-11-27 22:58:07,065 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 17:59:01] 2025-11-27 22:58:07,105 | INFO     | sufficient remaining disk space (81326505984 B)
[2025-11-27 17:59:01] 2025-11-27 22:58:07,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:59:01] 2025-11-27 22:58:07,105 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:59:01] 2025-11-27 22:58:07,105 | INFO     | update_server=False
[2025-11-27 17:59:01] 2025-11-27 22:58:07,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:59:01] 2025-11-27 22:58:07,114 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:59:01] 2025-11-27 22:58:07,115 | INFO     | aborting loop
[2025-11-27 17:59:01] 2025-11-27 22:58:07,902 | INFO     | all data control threads have been joined
[2025-11-27 17:59:01] 2025-11-27 22:58:08,105 | INFO     | all payload control threads have been joined
[2025-11-27 17:59:01] 2025-11-27 22:58:08,106 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:08,120 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:08,140 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:08,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:59:01] 2025-11-27 22:58:08,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:59:01] 2025-11-27 22:58:08,457 | INFO     | [job] validate thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:08,704 | INFO     | all job control threads have been joined
[2025-11-27 17:59:01] 2025-11-27 22:58:08,907 | INFO     | [data] control thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:08,950 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,111 | INFO     | [payload] control thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,144 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,220 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,230 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,310 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,310 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:09,643 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:59:01] 2025-11-27 22:58:09,705 | INFO     | [job] control thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:10,342 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:10,648 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:12,393 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:59:01] 2025-11-27 22:58:38,061 | INFO     | PID=4066889 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:59:01] 2025-11-27 22:58:38,061 | INFO     | .. there are 54 such processes running
[2025-11-27 17:59:01] 2025-11-27 22:58:38,061 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:59:01] 2025-11-27 22:58:38,061 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:59:01] 2025-11-27 22:58:38,061 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:59:01] 2025-11-27 22:58:55,307 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:59:01] 2025-11-27 22:58:56,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413408872256)>', '<ExcThread(monitor, started 140412924708608)>']
[2025-11-27 17:59:01] 2025-11-27 22:58:57,159 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:59:01] 2025-11-27 22:58:57,159 | INFO     | [monitor] control thread has ended
[2025-11-27 17:59:01] 2025-11-27 22:59:01,278 | INFO     | all workflow threads have been joined
[2025-11-27 17:59:01] 2025-11-27 22:59:01,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:59:01] 2025-11-27 22:59:01,278 | INFO     | traces error code: 0
[2025-11-27 17:59:01] 2025-11-27 22:59:01,278 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:59:01] 2025-11-27 22:59:01,387 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:59:01] 2025-11-27 22:59:01,390 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:59:01] 2025-11-27 22:59:01,392 [wrapper] pilotpid: 4066889
[2025-11-27 17:59:01] 2025-11-27 22:59:01,394 [wrapper] Pilot exit status: 0
[2025-11-27 17:59:01] 2025-11-27 22:59:01,404 [wrapper] pandaids: 6897510400
[2025-11-27 17:59:01] 2025-11-27 22:59:01,529 [wrapper] cleanup supervisor_pilot  719066 4066891
[2025-11-27 17:59:01] 2025-11-27 22:59:01,532 [wrapper] Test setup, not cleaning
[2025-11-27 17:59:01] 2025-11-27 22:59:01,536 [wrapper] apfmon messages muted
[2025-11-27 17:59:01] 2025-11-27 22:59:01,539 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:59:01] 2025-11-27 22:59:01,541 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:59:01]  *** Error codes and diagnostics ***
[2025-11-27 17:59:01]     "exeErrorCode": 0,
[2025-11-27 17:59:01]     "exeErrorDiag": "",
[2025-11-27 17:59:01]     "pilotErrorCode": 0,
[2025-11-27 17:59:01]     "pilotErrorDiag": "",
[2025-11-27 17:59:01]  *** Listing of results directory ***
[2025-11-27 17:59:01] total 1330960
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 17:59:01] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:59:01] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:05 run_atlas
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:05 job.xml
[2025-11-27 17:59:01] -rw-r--r--. 2 boincer umatlas 410431784 Nov 27 00:05 EVNT.47483658._002293.pool.root.1
[2025-11-27 17:59:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 17:59:01] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:05 shared
[2025-11-27 17:59:01] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:05 input.tar.gz
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:05 boinc_lockfile
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:05 pandaJob.out
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas        57 Nov 27 00:05 setup.sh.local
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 17:59:01] drwx------. 5 boincer umatlas      4096 Nov 27 00:06 pilot3
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas       532 Nov 27 17:51 boinc_task_state.xml
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas      6903 Nov 27 17:55 init_data.xml
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas 927585600 Nov 27 17:57 HITS.47556161._002762.pool.root.1
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas        95 Nov 27 17:57 pilot_heartbeat.json
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas      1054 Nov 27 17:57 memory_monitor_summary.json
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas   2200717 Nov 27 17:57 log.47556161._002762.job.log.tgz.1
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas      8587 Nov 27 17:58 heartbeat.json
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas        28 Nov 27 17:59 wrapper_checkpoint.txt
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:59 boinc_mmap_file
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas      4824 Nov 27 17:59 pilotlog.txt
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas   8278944 Nov 27 17:59 log.47556161._002762.job.log.1
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas       353 Nov 27 17:59 output.list
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:59 runtime_log
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas  10496000 Nov 27 17:59 result.tar.gz
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas       660 Nov 27 17:59 tSNLDmJbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQgJKDmrKNjGm.diag
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 17:59 runtime_log.err
[2025-11-27 17:59:01] -rw-r--r--. 1 boincer umatlas     21163 Nov 27 17:59 stderr.txt
[2025-11-27 17:59:01] HITS file was successfully produced:
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas 927585600 Nov 27 17:57 shared/HITS.pool.root.1
[2025-11-27 17:59:01]  *** Contents of shared directory: ***
[2025-11-27 17:59:01] total 1317520
[2025-11-27 17:59:01] -rw-r--r--. 2 boincer umatlas 410431784 Nov 27 00:05 ATLAS.root_0
[2025-11-27 17:59:01] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 17:59:01] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:05 input.tar.gz
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas 927585600 Nov 27 17:57 HITS.pool.root.1
[2025-11-27 17:59:01] -rw-------. 1 boincer umatlas  10496000 Nov 27 17:59 result.tar.gz
17:59:03 (4056749): run_atlas exited; CPU time 199281.229690
17:59:03 (4056749): called boinc_finish(0)

</stderr_txt>
]]>

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