Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:14 (2427979): wrapper (7.7.26015): starting
00:05:14 (2427979): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:05:14] Arguments: --nthreads 9
[2025-11-27 00:05:14] Threads: 9
[2025-11-27 00:05:14] Checking for CVMFS
[2025-11-27 00:05:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:05:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:05:15] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:05:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:05:16] 2.13.3.0 11160 31047 349920 153347 0 522 24401035 32935936 32882 16776704 0 115079240 99.391 179357464 41006 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:05:16] CVMFS is ok
[2025-11-27 00:05:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:05:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:05:16] Further information can be found at the LHC@home message board.
[2025-11-27 00:05:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:05:16] Checking for apptainer binary...
[2025-11-27 00:05:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:05:16] Running /usr/bin/apptainer --version
[2025-11-27 00:05:16] apptainer version 1.4.4-1.el9
[2025-11-27 00:05:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:05:17] c6-2-29-2.aglt2.org
[2025-11-27 00:05:17] apptainer works
[2025-11-27 00:05:17] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:05:17] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:05:17] Starting ATLAS job with PandaID=6898120659
[2025-11-27 00:05:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:20:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:20:09] 2025-11-27 20:19:02,927 | INFO     | mean x: 1764247434.0402234
[2025-11-27 15:20:09] 2025-11-27 20:19:02,927 | INFO     | mean y: 2996177.1016759775
[2025-11-27 15:20:09] 2025-11-27 20:19:02,927 | INFO     | intersect: -18065740313.973476
[2025-11-27 15:20:09] 2025-11-27 20:19:02,928 | INFO     | chi2: 12.387973522840095
[2025-11-27 15:20:09] 2025-11-27 20:19:02,929 | INFO     | sum of square deviations: 218605726517.10114
[2025-11-27 15:20:09] 2025-11-27 20:19:02,989 | INFO     | sum of deviations: 2613237409689.683
[2025-11-27 15:20:09] 2025-11-27 20:19:02,989 | INFO     | mean x: 1764247281.5617979
[2025-11-27 15:20:09] 2025-11-27 20:19:02,990 | INFO     | mean y: 3010027.0966292135
[2025-11-27 15:20:09] 2025-11-27 20:19:02,990 | INFO     | intersect: -21087000145.89833
[2025-11-27 15:20:09] 2025-11-27 20:19:02,991 | INFO     | chi2: 8.871983909804616
[2025-11-27 15:20:09] 2025-11-27 20:19:02,991 | INFO     | current chi2=8.871983909804616 (change=28.38228227201922 %)
[2025-11-27 15:20:09] 2025-11-27 20:19:02,992 | INFO     | sum of square deviations: 214941879249.1752
[2025-11-27 15:20:09] 2025-11-27 20:19:03,013 | INFO     | time since job start (54759s) is within the limit (172800.0s)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,045 | INFO     | sum of deviations: 2654254587558.3545
[2025-11-27 15:20:09] 2025-11-27 20:19:03,045 | INFO     | mean x: 1764247129.056497
[2025-11-27 15:20:09] 2025-11-27 20:19:03,045 | INFO     | mean y: 3011724.572881356
[2025-11-27 15:20:09] 2025-11-27 20:19:03,045 | INFO     | intersect: -21783161599.315712
[2025-11-27 15:20:09] 2025-11-27 20:19:03,047 | INFO     | chi2: 8.563945963492277
[2025-11-27 15:20:09] 2025-11-27 20:19:03,047 | INFO     | current chi2=8.563945963492277 (change=3.4720300379706512 %)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,047 | INFO     | right removable region: 884
[2025-11-27 15:20:09] 2025-11-27 20:19:03,048 | INFO     | sum of square deviations: 218603683815.2233
[2025-11-27 15:20:09] 2025-11-27 20:19:03,095 | INFO     | sum of deviations: 1908230978090.2922
[2025-11-27 15:20:09] 2025-11-27 20:19:03,096 | INFO     | mean x: 1764247586.5606742
[2025-11-27 15:20:09] 2025-11-27 20:19:03,096 | INFO     | mean y: 3011342.179775281
[2025-11-27 15:20:09] 2025-11-27 20:19:03,096 | INFO     | intersect: -15397423997.884092
[2025-11-27 15:20:09] 2025-11-27 20:19:03,105 | INFO     | chi2: 8.249120270822324
[2025-11-27 15:20:09] 2025-11-27 20:19:03,106 | INFO     | current chi2=8.249120270822324 (change=33.410252648561425 %)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,106 | INFO     | sum of square deviations: 214938987189.8127
[2025-11-27 15:20:09] 2025-11-27 20:19:03,142 | INFO     | sum of deviations: 1580817791401.2861
[2025-11-27 15:20:09] 2025-11-27 20:19:03,143 | INFO     | mean x: 1764247739.0836158
[2025-11-27 15:20:09] 2025-11-27 20:19:03,143 | INFO     | mean y: 3024968.1853107344
[2025-11-27 15:20:09] 2025-11-27 20:19:03,143 | INFO     | intersect: -12972537310.425165
[2025-11-27 15:20:09] 2025-11-27 20:19:03,144 | INFO     | chi2: 5.124820813570634
[2025-11-27 15:20:09] 2025-11-27 20:19:03,144 | INFO     | current chi2=5.124820813570634 (change=37.87433513731811 %)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,150 | INFO     | sum of square deviations: 211315615980.58978
[2025-11-27 15:20:09] 2025-11-27 20:19:03,289 | INFO     | monitor loop #3337: job 0:6898120659 is in state 'finished'
[2025-11-27 15:20:09] 2025-11-27 20:19:03,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,295 | INFO     | sum of deviations: 1405431465110.3542
[2025-11-27 15:20:09] 2025-11-27 20:19:03,295 | INFO     | mean x: 1764247891.603409
[2025-11-27 15:20:09] 2025-11-27 20:19:03,295 | INFO     | mean y: 3032341.7488636365
[2025-11-27 15:20:09] 2025-11-27 20:19:03,295 | INFO     | intersect: -11730740799.474112
[2025-11-27 15:20:09] 2025-11-27 20:19:03,296 | INFO     | chi2: 4.202761150184814
[2025-11-27 15:20:09] 2025-11-27 20:19:03,296 | INFO     | current chi2=4.202761150184814 (change=17.992037125360298 %)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,296 | INFO     | left removable region: 30
[2025-11-27 15:20:09] 2025-11-27 20:19:03,297 | INFO     | sum of square deviations: 193133460463.19565
[2025-11-27 15:20:09] 2025-11-27 20:19:03,322 | INFO     | sum of deviations: 1569394367552.929
[2025-11-27 15:20:09] 2025-11-27 20:19:03,322 | INFO     | mean x: 1764248013.6381733
[2025-11-27 15:20:09] 2025-11-27 20:19:03,322 | INFO     | mean y: 3057606.9285714286
[2025-11-27 15:20:09] 2025-11-27 20:19:03,322 | INFO     | intersect: -14333147465.614138
[2025-11-27 15:20:09] 2025-11-27 20:19:03,328 | INFO     | chi2: 0.08239628608587063
[2025-11-27 15:20:09] 2025-11-27 20:19:03,328 | INFO     | current memory leak: 8.13 B/s (using 854 data points, chi2=0.08)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,329 | INFO     | could have reported an average CPU frequency of 3111 MHz (33 samples)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,329 | INFO     | ..............................
[2025-11-27 15:20:09] 2025-11-27 20:19:03,329 | INFO     | . Timing measurements:
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . get job = 0 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . initial setup = 4 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . payload setup = 60 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . stage-in = 0 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . payload execution = 54594 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . stage-out = 4 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | . log creation = 0 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,330 | INFO     | ..............................
[2025-11-27 15:20:09] 2025-11-27 20:19:03,454 | INFO     | 
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | job summary report
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | --------------------------------------------------
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | PanDA job id: 6898120659
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | task id: 47556161
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | errors: (none)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | pilot state: finished 
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | transexitcode: 0
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | exeerrorcode: 0
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | exeerrordiag: 
[2025-11-27 15:20:09] 2025-11-27 20:19:03,455 | INFO     | exitcode: 0
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | exitmsg: OK
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | cpuconsumptiontime: 233772 s
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | nevents: 1000
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | neventsw: 0
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | pid: 2474588
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | pgrp: 2474588
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | corecount: 9
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | event service: False
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | sizes: {0: 2284030, 1: 2284086, 2: 2284313, 3: 2284341, 14: 2284341, 25: 2284369, 35: 2284525, 38: 2284815, 47: 2284843, 54658: 2334682, 54662: 2344012, 54677: 234
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | --------------------------------------------------
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | 
[2025-11-27 15:20:09] 2025-11-27 20:19:03,456 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,476 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:20:09] 2025-11-27 20:19:03,477 | INFO     | job 6898120659 has completed (purged errors)
[2025-11-27 15:20:09] 2025-11-27 20:19:03,477 | INFO     | overall cleanup function is called
[2025-11-27 15:20:09] 2025-11-27 20:19:04,492 | INFO     | --- collectZombieJob: --- 10, [2474588]
[2025-11-27 15:20:09] 2025-11-27 20:19:04,492 | INFO     | zombie collector waiting for pid 2474588
[2025-11-27 15:20:09] 2025-11-27 20:19:04,492 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:20:09] 2025-11-27 20:19:04,492 | INFO     | collected zombie processes
[2025-11-27 15:20:09] 2025-11-27 20:19:04,492 | INFO     | will attempt to kill all subprocesses of pid=2474588
[2025-11-27 15:20:09] 2025-11-27 20:19:04,923 | INFO     | process IDs to be killed: [2474588] (in reverse order)
[2025-11-27 15:20:09] 2025-11-27 20:19:05,102 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:20:09] 2025-11-27 20:19:05,102 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:20:09] 2025-11-27 20:19:05,121 | INFO     | did not find any defunct processes belonging to 2474588
[2025-11-27 15:20:09] 2025-11-27 20:19:05,138 | INFO     | did not find any defunct processes belonging to 2474588
[2025-11-27 15:20:09] 2025-11-27 20:19:05,139 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:20:09] 2025-11-27 20:19:05,139 | INFO     | ready for new job
[2025-11-27 15:20:09] 2025-11-27 20:19:05,139 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:20:09] 2025-11-27 20:19:05,143 | INFO     | ***************************************
[2025-11-27 15:20:09] 2025-11-27 20:19:05,144 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:20:09] 2025-11-27 20:19:05,144 | INFO     | ***************************************
[2025-11-27 15:20:09] 2025-11-27 20:19:05,144 | INFO     | 
[2025-11-27 15:20:09] 2025-11-27 20:19:05,146 | INFO     | architecture information:
[2025-11-27 15:20:09] 2025-11-27 20:19:05,147 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:20:09] 2025-11-27 20:19:05,161 | INFO     | cat /etc/os-release:
[2025-11-27 15:20:09] NAME="CentOS Linux"
[2025-11-27 15:20:09] VERSION="7 (Core)"
[2025-11-27 15:20:09] ID="centos"
[2025-11-27 15:20:09] ID_LIKE="rhel fedora"
[2025-11-27 15:20:09] VERSION_ID="7"
[2025-11-27 15:20:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:20:09] ANSI_COLOR="0;31"
[2025-11-27 15:20:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:20:09] HOME_URL="https://www.centos.org/"
[2025-11-27 15:20:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:20:09] 
[2025-11-27 15:20:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:20:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:20:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:20:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:20:09] 
[2025-11-27 15:20:09] 2025-11-27 20:19:05,162 | INFO     | ***************************************
[2025-11-27 15:20:09] 2025-11-27 20:19:05,665 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 15:20:09] 2025-11-27 20:19:05,685 | INFO     | sufficient remaining disk space (70591184896 B)
[2025-11-27 15:20:09] 2025-11-27 20:19:05,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:20:09] 2025-11-27 20:19:05,686 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:20:09] 2025-11-27 20:19:05,686 | INFO     | update_server=False
[2025-11-27 15:20:09] 2025-11-27 20:19:05,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:20:09] 2025-11-27 20:19:05,799 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 15:20:09] 2025-11-27 20:19:05,799 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 15:20:09] 2025-11-27 20:19:05,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 20:19:05,799 | INFO     | will abort loop
[2025-11-27 15:20:09] 2025-11-27 20:19:06,157 | INFO     | all payload control threads have been joined
[2025-11-27 15:20:09] 2025-11-27 20:19:06,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 20:19:06,342 | INFO     | all data control threads have been joined
[2025-11-27 15:20:09] 2025-11-27 20:19:06,691 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:06,805 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:06,961 | INFO     | all job control threads have been joined
[2025-11-27 15:20:09] 2025-11-27 20:19:06,965 | INFO     | [job] validate thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:06,975 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,163 | INFO     | [payload] control thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,348 | INFO     | [data] control thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,408 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,443 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,838 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 20:19:07,926 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,967 | INFO     | [job] control thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,976 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:07,992 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:08,304 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:08,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:20:09] 2025-11-27 20:19:09,474 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:11,856 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:20:09] 2025-11-27 20:19:36,745 | INFO     | PID=2436624 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 15:20:09] 2025-11-27 20:19:36,745 | INFO     | .. there are 46 such processes running
[2025-11-27 15:20:09] 2025-11-27 20:19:36,746 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:20:09] 2025-11-27 20:19:36,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:20:09] 2025-11-27 20:19:36,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:20:09] 2025-11-27 20:20:02,393 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:20:09] 2025-11-27 20:20:04,301 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139731148588864)>', '<ExcThread(monitor, started 139730519848704)>']
[2025-11-27 15:20:09] 2025-11-27 20:20:04,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:20:09] 2025-11-27 20:20:04,959 | INFO     | [monitor] control thread has ended
[2025-11-27 15:20:09] 2025-11-27 20:20:09,327 | INFO     | all workflow threads have been joined
[2025-11-27 15:20:09] 2025-11-27 20:20:09,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:20:09] 2025-11-27 20:20:09,328 | INFO     | traces error code: 0
[2025-11-27 15:20:09] 2025-11-27 20:20:09,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:20:09] 2025-11-27 20:20:09,588 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:20:09] 2025-11-27 20:20:09,593 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:20:09] 2025-11-27 20:20:09,597 [wrapper] pilotpid: 2436624
[2025-11-27 15:20:09] 2025-11-27 20:20:09,600 [wrapper] Pilot exit status: 0
[2025-11-27 15:20:09] 2025-11-27 20:20:09,619 [wrapper] pandaids: 6898120659
[2025-11-27 15:20:09] 2025-11-27 20:20:09,707 [wrapper] cleanup supervisor_pilot 1685832 2436625
[2025-11-27 15:20:09] 2025-11-27 20:20:09,715 [wrapper] Test setup, not cleaning
[2025-11-27 15:20:09] 2025-11-27 20:20:09,719 [wrapper] apfmon messages muted
[2025-11-27 15:20:09] 2025-11-27 20:20:09,739 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:20:09] 2025-11-27 20:20:09,742 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:20:09]  *** Error codes and diagnostics ***
[2025-11-27 15:20:09]     "exeErrorCode": 0,
[2025-11-27 15:20:09]     "exeErrorDiag": "",
[2025-11-27 15:20:09]     "pilotErrorCode": 0,
[2025-11-27 15:20:09]     "pilotErrorDiag": "",
[2025-11-27 15:20:09]  *** Listing of results directory ***
[2025-11-27 15:20:09] total 1323244
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 15:20:09] -rwx------. 1 boincer umatlas     36292 Nov 25 22:40 runpilot2-wrapper.sh
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:40 queuedata.json
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:20:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:05 run_atlas
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:05 job.xml
[2025-11-27 15:20:09] -rw-r--r--. 2 boincer umatlas 411122395 Nov 27 00:05 EVNT.47483658._002441.pool.root.1
[2025-11-27 15:20:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 15:20:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:05 shared
[2025-11-27 15:20:09] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:05 input.tar.gz
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:05 boinc_lockfile
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas      2781 Nov 27 00:05 pandaJob.out
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas        57 Nov 27 00:05 setup.sh.local
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas    991570 Nov 27 00:06 agis_schedconf.cvmfs.json
[2025-11-27 15:20:09] drwx------. 5 boincer umatlas      4096 Nov 27 00:06 pilot3
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:10 boinc_task_state.xml
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas 921564450 Nov 27 15:18 HITS.47556161._004231.pool.root.1
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas      1064 Nov 27 15:18 memory_monitor_summary.json
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:18 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas   2184255 Nov 27 15:18 log.47556161._004231.job.log.tgz.1
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas      8632 Nov 27 15:19 heartbeat.json
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas        95 Nov 27 15:19 pilot_heartbeat.json
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 15:19 init_data.xml
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas      5010 Nov 27 15:20 pilotlog.txt
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas   7012117 Nov 27 15:20 log.47556161._004231.job.log.1
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:20 boinc_mmap_file
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:20 wrapper_checkpoint.txt
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas       353 Nov 27 15:20 output.list
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:20 runtime_log
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas   9216000 Nov 27 15:20 result.tar.gz
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas      9348 Nov 27 15:20 runtime_log.err
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas       662 Nov 27 15:20 eLKNDmqZLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmHsJKDm3fxt4m.diag
[2025-11-27 15:20:09] -rw-r--r--. 1 boincer umatlas     21300 Nov 27 15:20 stderr.txt
[2025-11-27 15:20:09] HITS file was successfully produced:
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas 921564450 Nov 27 15:18 shared/HITS.pool.root.1
[2025-11-27 15:20:09]  *** Contents of shared directory: ***
[2025-11-27 15:20:09] total 1311060
[2025-11-27 15:20:09] -rw-r--r--. 2 boincer umatlas 411122395 Nov 27 00:05 ATLAS.root_0
[2025-11-27 15:20:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 15:20:09] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:05 input.tar.gz
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas 921564450 Nov 27 15:18 HITS.pool.root.1
[2025-11-27 15:20:09] -rw-------. 1 boincer umatlas   9216000 Nov 27 15:20 result.tar.gz
15:20:11 (2427979): run_atlas exited; CPU time 235265.601171
15:20:11 (2427979): called boinc_finish(0)

</stderr_txt>
]]>

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