Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:31:43 (32281): wrapper (7.7.26015): starting
01:31:43 (32281): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:31:43] Arguments: --nthreads 8
[2025-11-27 01:31:43] Threads: 8
[2025-11-27 01:31:43] Checking for CVMFS
[2025-11-27 01:31:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:31:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:31:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:31:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:31:44] 2.13.2.0 6969 37795 231316 153350 0 152 31449019 40960000 19589 16776704 0 110877624 99.613 101362192 35713 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 01:31:44] CVMFS is ok
[2025-11-27 01:31:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:31:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:31:44] Further information can be found at the LHC@home message board.
[2025-11-27 01:31:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:31:44] Checking for apptainer binary...
[2025-11-27 01:31:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 01:31:44] Running /usr/bin/apptainer --version
[2025-11-27 01:31:44] apptainer version 1.4.4-1.el9
[2025-11-27 01:31:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:31:44] c-212-14.aglt2.org
[2025-11-27 01:31:44] apptainer works
[2025-11-27 01:31:44] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:31:44] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:31:44] Starting ATLAS job with PandaID=6896764199
[2025-11-27 01:31:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 23:34:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 23:34:36] 2025-11-28 04:33:59,611 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,254 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 23:34:36] 2025-11-28 04:34:00,284 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2981.3947916666675
[2025-11-27 23:34:36] 2025-11-28 04:34:00,321 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896764199/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,321 | INFO     | extracted standard info from prmon json
[2025-11-27 23:34:36] 2025-11-28 04:34:00,322 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 23:34:36] 2025-11-28 04:34:00,322 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 23:34:36] 2025-11-28 04:34:00,377 | INFO     | fitting pss+swap vs Time
[2025-11-27 23:34:36] 2025-11-28 04:34:00,379 | INFO     | sum of square deviations: 679665032687.0458
[2025-11-27 23:34:36] 2025-11-28 04:34:00,468 | INFO     | sum of deviations: 3524111779735.432
[2025-11-27 23:34:36] 2025-11-28 04:34:00,469 | INFO     | mean x: 1764264742.7906082
[2025-11-27 23:34:36] 2025-11-28 04:34:00,469 | INFO     | mean y: 2942780.3471901463
[2025-11-27 23:34:36] 2025-11-28 04:34:00,469 | INFO     | intersect: -9144896027.925207
[2025-11-27 23:34:36] 2025-11-28 04:34:00,470 | INFO     | chi2: 8.421783865336161
[2025-11-27 23:34:36] 2025-11-28 04:34:00,475 | INFO     | sum of square deviations: 671847390858.4518
[2025-11-27 23:34:36] 2025-11-28 04:34:00,525 | INFO     | sum of deviations: 3999968376749.326
[2025-11-27 23:34:36] 2025-11-28 04:34:00,525 | INFO     | mean x: 1764264590.297527
[2025-11-27 23:34:36] 2025-11-28 04:34:00,525 | INFO     | mean y: 2952063.193972179
[2025-11-27 23:34:36] 2025-11-28 04:34:00,525 | INFO     | intersect: -10500925253.93253
[2025-11-27 23:34:36] 2025-11-28 04:34:00,526 | INFO     | chi2: 4.822880084988895
[2025-11-27 23:34:36] 2025-11-28 04:34:00,527 | INFO     | current chi2=4.822880084988895 (change=42.73327169033937 %)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,528 | INFO     | sum of square deviations: 664089936204.7346
[2025-11-27 23:34:36] 2025-11-28 04:34:00,563 | INFO     | sum of deviations: 4348205697182.0664
[2025-11-27 23:34:36] 2025-11-28 04:34:00,564 | INFO     | mean x: 1764264437.8044996
[2025-11-27 23:34:36] 2025-11-28 04:34:00,564 | INFO     | mean y: 2958901.194724593
[2025-11-27 23:34:36] 2025-11-28 04:34:00,564 | INFO     | intersect: -11548766643.148117
[2025-11-27 23:34:36] 2025-11-28 04:34:00,565 | INFO     | chi2: 2.2796352853104
[2025-11-27 23:34:36] 2025-11-28 04:34:00,565 | INFO     | current chi2=2.2796352853104 (change=52.73290554318957 %)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,566 | INFO     | sum of square deviations: 656391964647.0996
[2025-11-27 23:34:36] 2025-11-28 04:34:00,600 | INFO     | sum of deviations: 4324432161976.562
[2025-11-27 23:34:36] 2025-11-28 04:34:00,600 | INFO     | mean x: 1764264285.3068535
[2025-11-27 23:34:36] 2025-11-28 04:34:00,600 | INFO     | mean y: 2958429.3107476635
[2025-11-27 23:34:36] 2025-11-28 04:34:00,600 | INFO     | intersect: -11620342324.697443
[2025-11-27 23:34:36] 2025-11-28 04:34:00,601 | INFO     | chi2: 2.2594464088690662
[2025-11-27 23:34:36] 2025-11-28 04:34:00,602 | INFO     | current chi2=2.2594464088690662 (change=0.8856187027559921 %)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,602 | INFO     | right removable region: 1283
[2025-11-27 23:34:36] 2025-11-28 04:34:00,603 | INFO     | sum of square deviations: 671846130115.6392
[2025-11-27 23:34:36] 2025-11-28 04:34:00,645 | INFO     | sum of deviations: 3197107896311.6025
[2025-11-27 23:34:36] 2025-11-28 04:34:00,645 | INFO     | mean x: 1764264895.2959814
[2025-11-27 23:34:36] 2025-11-28 04:34:00,645 | INFO     | mean y: 2949150.3848531684
[2025-11-27 23:34:36] 2025-11-28 04:34:00,645 | INFO     | intersect: -8392641707.547581
[2025-11-27 23:34:36] 2025-11-28 04:34:00,673 | INFO     | chi2: 6.419067125924692
[2025-11-27 23:34:36] 2025-11-28 04:34:00,673 | INFO     | current chi2=6.419067125924692 (change=23.780196350735125 %)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,673 | INFO     | left removable region: 10
[2025-11-27 23:34:36] 2025-11-28 04:34:00,674 | INFO     | sum of square deviations: 639665148224.2476
[2025-11-27 23:34:36] 2025-11-28 04:34:00,738 | INFO     | sum of deviations: 3913918808971.976
[2025-11-27 23:34:36] 2025-11-28 04:34:00,743 | INFO     | mean x: 1764264559.8146112
[2025-11-27 23:34:36] 2025-11-28 04:34:00,743 | INFO     | mean y: 2966365.915161037
[2025-11-27 23:34:36] 2025-11-28 04:34:00,743 | INFO     | intersect: -10792038276.483017
[2025-11-27 23:34:36] 2025-11-28 04:34:00,744 | INFO     | chi2: 0.20726602833638325
[2025-11-27 23:34:36] 2025-11-28 04:34:00,744 | INFO     | current memory leak: 6.12 B/s (using 1273 data points, chi2=0.21)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,746 | INFO     | could have reported an average CPU frequency of 3000 MHz (47 samples)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,746 | INFO     | ..............................
[2025-11-27 23:34:36] 2025-11-28 04:34:00,746 | INFO     | . Timing measurements:
[2025-11-27 23:34:36] 2025-11-28 04:34:00,748 | INFO     | . get job = 0 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,748 | INFO     | . initial setup = 2 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,749 | INFO     | . payload setup = 8 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,749 | INFO     | . stage-in = 0 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,749 | INFO     | . payload execution = 79231 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,749 | INFO     | . stage-out = 10 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,749 | INFO     | . log creation = 4 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,749 | INFO     | ..............................
[2025-11-27 23:34:36] 2025-11-28 04:34:00,927 | INFO     | 
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | job summary report
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | --------------------------------------------------
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | PanDA job id: 6896764199
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | task id: 47556185
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | errors: (none)
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | pilot state: finished 
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | transexitcode: 0
[2025-11-27 23:34:36] 2025-11-28 04:34:00,929 | INFO     | exeerrorcode: 0
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | exeerrordiag: 
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | exitcode: 0
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | exitmsg: OK
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | cpuconsumptiontime: 204820 s
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | nevents: 1000
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | neventsw: 0
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | pid: 42519
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | pgrp: 42519
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | corecount: 8
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | event service: False
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | sizes: {0: 2284312, 6: 2284574, 11: 2284602, 79244: 2344160, 79245: 2344159, 79256: 2353393, 79303: 2353583}
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | --------------------------------------------------
[2025-11-27 23:34:36] 2025-11-28 04:34:00,930 | INFO     | 
[2025-11-27 23:34:36] 2025-11-28 04:34:00,931 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,100 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 23:34:36] 2025-11-28 04:34:01,101 | INFO     | job 6896764199 has completed (purged errors)
[2025-11-27 23:34:36] 2025-11-28 04:34:01,101 | INFO     | overall cleanup function is called
[2025-11-27 23:34:36] 2025-11-28 04:34:02,200 | INFO     | --- collectZombieJob: --- 10, [42519]
[2025-11-27 23:34:36] 2025-11-28 04:34:02,201 | INFO     | zombie collector waiting for pid 42519
[2025-11-27 23:34:36] 2025-11-28 04:34:02,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 23:34:36] 2025-11-28 04:34:02,201 | INFO     | collected zombie processes
[2025-11-27 23:34:36] 2025-11-28 04:34:02,201 | INFO     | will attempt to kill all subprocesses of pid=42519
[2025-11-27 23:34:36] 2025-11-28 04:34:02,766 | INFO     | process IDs to be killed: [42519] (in reverse order)
[2025-11-27 23:34:36] 2025-11-28 04:34:02,967 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 23:34:36] 2025-11-28 04:34:02,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 23:34:36] 2025-11-28 04:34:03,088 | INFO     | did not find any defunct processes belonging to 42519
[2025-11-27 23:34:36] 2025-11-28 04:34:03,124 | INFO     | did not find any defunct processes belonging to 42519
[2025-11-27 23:34:36] 2025-11-28 04:34:03,134 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 23:34:36] 2025-11-28 04:34:03,134 | INFO     | ready for new job
[2025-11-27 23:34:36] 2025-11-28 04:34:03,134 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 23:34:36] 2025-11-28 04:34:03,150 | INFO     | ***************************************
[2025-11-27 23:34:36] 2025-11-28 04:34:03,176 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 23:34:36] 2025-11-28 04:34:03,176 | INFO     | ***************************************
[2025-11-27 23:34:36] 2025-11-28 04:34:03,176 | INFO     | 
[2025-11-27 23:34:36] 2025-11-28 04:34:03,182 | INFO     | architecture information:
[2025-11-27 23:34:36] 2025-11-28 04:34:03,183 | INFO     | executing command: cat /etc/os-release
[2025-11-27 23:34:36] 2025-11-28 04:34:03,304 | INFO     | cat /etc/os-release:
[2025-11-27 23:34:36] NAME="CentOS Linux"
[2025-11-27 23:34:36] VERSION="7 (Core)"
[2025-11-27 23:34:36] ID="centos"
[2025-11-27 23:34:36] ID_LIKE="rhel fedora"
[2025-11-27 23:34:36] VERSION_ID="7"
[2025-11-27 23:34:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 23:34:36] ANSI_COLOR="0;31"
[2025-11-27 23:34:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 23:34:36] HOME_URL="https://www.centos.org/"
[2025-11-27 23:34:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 23:34:36] 
[2025-11-27 23:34:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 23:34:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 23:34:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 23:34:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 23:34:36] 
[2025-11-27 23:34:36] 2025-11-28 04:34:03,304 | INFO     | ***************************************
[2025-11-27 23:34:36] 2025-11-28 04:34:03,810 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 23:34:36] 2025-11-28 04:34:04,163 | INFO     | sufficient remaining disk space (122330021888 B)
[2025-11-27 23:34:36] 2025-11-28 04:34:04,164 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 23:34:36] 2025-11-28 04:34:04,164 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 23:34:36] 2025-11-28 04:34:04,164 | INFO     | update_server=False
[2025-11-27 23:34:36] 2025-11-28 04:34:04,164 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 23:34:36] 2025-11-28 04:34:04,411 | INFO     | all payload control threads have been joined
[2025-11-27 23:34:36] 2025-11-28 04:34:04,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 23:34:36] 2025-11-28 04:34:04,539 | INFO     | all job control threads have been joined
[2025-11-27 23:34:36] 2025-11-28 04:34:04,675 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 23:34:36] 2025-11-28 04:34:04,753 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 23:34:36] 2025-11-28 04:34:04,753 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:34:36] 2025-11-28 04:34:04,753 | INFO     | will abort loop
[2025-11-27 23:34:36] 2025-11-28 04:34:05,171 | INFO     | [job] retrieve thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,206 | INFO     | all data control threads have been joined
[2025-11-27 23:34:36] 2025-11-28 04:34:05,263 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,301 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 23:34:36] 2025-11-28 04:34:05,418 | INFO     | [payload] control thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,513 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,516 | INFO     | [job] validate thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,518 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,549 | INFO     | [job] control thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,759 | INFO     | [job] job monitor thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,760 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,845 | INFO     | [data] copytool_in thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:05,959 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 23:34:36] 2025-11-28 04:34:06,213 | INFO     | [data] control thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:06,249 | INFO     | [payload] failed_post thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:06,514 | INFO     | [data] copytool_out thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:06,667 | INFO     | [payload] validate_post thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:06,966 | INFO     | [job] queue monitor thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:09,311 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 23:34:36] 2025-11-28 04:34:20,665 | INFO     | [monitor] cgroup control has ended
[2025-11-27 23:34:36] 2025-11-28 04:34:22,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140263532463936)>', '<ExcThread(monitor, started 140262810572544)>']
[2025-11-27 23:34:36] 2025-11-28 04:34:27,202 | INFO     | all workflow threads have been joined
[2025-11-27 23:34:36] 2025-11-28 04:34:27,203 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 23:34:36] 2025-11-28 04:34:27,203 | INFO     | traces error code: 0
[2025-11-27 23:34:36] 2025-11-28 04:34:27,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 23:34:36] 2025-11-28 04:34:34,003 | INFO     | PID=36049 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 23:34:36] 2025-11-28 04:34:34,004 | INFO     | .. there are 25 such processes running
[2025-11-27 23:34:36] 2025-11-28 04:34:34,004 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 23:34:36] 2025-11-28 04:34:34,004 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 23:34:36] 2025-11-28 04:34:34,004 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 23:34:36] 2025-11-28 04:34:34,004 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 23:34:36] 2025-11-28 04:34:34,004 | INFO     | [monitor] control thread has ended
[2025-11-27 23:34:36] 2025-11-28 04:34:34,279 [wrapper] ==== pilot stdout END ====
[2025-11-27 23:34:36] 2025-11-28 04:34:34,308 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 23:34:36] 2025-11-28 04:34:34,332 [wrapper] pilotpid: 36049
[2025-11-27 23:34:36] 2025-11-28 04:34:34,377 [wrapper] Pilot exit status: 0
[2025-11-27 23:34:36] 2025-11-28 04:34:34,631 [wrapper] pandaids: 6896764199
[2025-11-27 23:34:36] 2025-11-28 04:34:35,099 [wrapper] cleanup supervisor_pilot 4059176 36050
[2025-11-27 23:34:36] 2025-11-28 04:34:35,143 [wrapper] Test setup, not cleaning
[2025-11-27 23:34:36] 2025-11-28 04:34:35,210 [wrapper] apfmon messages muted
[2025-11-27 23:34:36] 2025-11-28 04:34:35,245 [wrapper] ==== wrapper stdout END ====
[2025-11-27 23:34:36] 2025-11-28 04:34:35,271 [wrapper] ==== wrapper stderr END ====
[2025-11-27 23:34:36]  *** Error codes and diagnostics ***
[2025-11-27 23:34:36]     "exeErrorCode": 0,
[2025-11-27 23:34:36]     "exeErrorDiag": "",
[2025-11-27 23:34:36]     "pilotErrorCode": 0,
[2025-11-27 23:34:36]     "pilotErrorDiag": "",
[2025-11-27 23:34:36]  *** Listing of results directory ***
[2025-11-27 23:34:36] total 1311652
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 03:42 pilot3.tar.gz
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 03:48 queuedata.json
[2025-11-27 23:34:36] -rwx------. 1 boincer umatlas     36292 Nov 25 03:48 runpilot2-wrapper.sh
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas       100 Nov 27 01:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 23:34:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 01:31 run_atlas
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas       105 Nov 27 01:31 job.xml
[2025-11-27 23:34:36] -rw-r--r--. 2 boincer umatlas 408172861 Nov 27 01:31 EVNT.47483658._004254.pool.root.1
[2025-11-27 23:34:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 01:31 start_atlas.sh
[2025-11-27 23:34:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 01:31 shared
[2025-11-27 23:34:36] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 01:31 input.tar.gz
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas         0 Nov 27 01:31 boinc_lockfile
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 01:31 pandaJob.out
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas        57 Nov 27 01:31 setup.sh.local
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas    991554 Nov 27 01:31 agis_schedconf.cvmfs.json
[2025-11-27 23:34:36] drwx------. 5 boincer umatlas      4096 Nov 27 01:32 pilot3
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas       533 Nov 27 23:21 boinc_task_state.xml
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas 906978476 Nov 27 23:31 HITS.47556185._000172.pool.root.1
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 23:31 init_data.xml
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas      1062 Nov 27 23:32 memory_monitor_summary.json
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas   1516240 Nov 27 23:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas   2321250 Nov 27 23:33 log.47556185._000172.job.log.tgz.1
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas        95 Nov 27 23:33 pilot_heartbeat.json
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas      7937 Nov 27 23:34 heartbeat.json
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 23:34 boinc_mmap_file
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas        29 Nov 27 23:34 wrapper_checkpoint.txt
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas       821 Nov 27 23:34 pilotlog.txt
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas   9715186 Nov 27 23:34 log.47556185._000172.job.log.1
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas       353 Nov 27 23:34 output.list
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas       620 Nov 27 23:34 runtime_log
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas  12052480 Nov 27 23:34 result.tar.gz
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas       663 Nov 27 23:34 WtKODmPu3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxGMKDmfSXdMn.diag
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 23:34 runtime_log.err
[2025-11-27 23:34:36] -rw-r--r--. 1 boincer umatlas     21293 Nov 27 23:34 stderr.txt
[2025-11-27 23:34:36] HITS file was successfully produced:
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas 906978476 Nov 27 23:31 shared/HITS.pool.root.1
[2025-11-27 23:34:36]  *** Contents of shared directory: ***
[2025-11-27 23:34:36] total 1296704
[2025-11-27 23:34:36] -rw-r--r--. 2 boincer umatlas 408172861 Nov 27 01:31 ATLAS.root_0
[2025-11-27 23:34:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 01:31 start_atlas.sh
[2025-11-27 23:34:36] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 01:31 input.tar.gz
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas 906978476 Nov 27 23:31 HITS.pool.root.1
[2025-11-27 23:34:36] -rw-------. 1 boincer umatlas  12052480 Nov 27 23:34 result.tar.gz
23:34:38 (32281): run_atlas exited; CPU time 206352.015062
23:34:38 (32281): called boinc_finish(0)

</stderr_txt>
]]>

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