Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:13 (583870): wrapper (7.7.26015): starting
00:04:13 (583870): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:04:13] Arguments: --nthreads 9
[2025-11-27 00:04:13] Threads: 9
[2025-11-27 00:04:13] Checking for CVMFS
[2025-11-27 00:04:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:04:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:04:13] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:04:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:04:13] 2.13.3.0 12763 31000 230292 153347 2 619 37727428 40960000 57984 16776704 0 275114850 99.746 169513071 35913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:04:13] CVMFS is ok
[2025-11-27 00:04:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:04:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:04:13] Further information can be found at the LHC@home message board.
[2025-11-27 00:04:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:04:13] Checking for apptainer binary...
[2025-11-27 00:04:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:04:13] Running /usr/bin/apptainer --version
[2025-11-27 00:04:13] apptainer version 1.4.4-1.el9
[2025-11-27 00:04:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:04:14] c7-2-17.aglt2.org
[2025-11-27 00:04:14] apptainer works
[2025-11-27 00:04:14] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:04:14] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:04:14] Starting ATLAS job with PandaID=6898175063
[2025-11-27 00:04:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 15:18:18]  *** The last 200 lines of the pilot log: ***
[2025-11-27 15:18:18] 2025-11-27 20:17:40,401 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 15:18:18] 2025-11-27 20:17:40,401 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 15:18:18] 2025-11-27 20:17:40,414 | INFO     | fitting pss+swap vs Time
[2025-11-27 15:18:18] 2025-11-27 20:17:40,415 | INFO     | sum of square deviations: 223794124946.0756
[2025-11-27 15:18:18] 2025-11-27 20:17:40,432 | INFO     | sum of deviations: 3175383390179.6562
[2025-11-27 15:18:18] 2025-11-27 20:17:40,432 | INFO     | mean x: 1764247246.3835006
[2025-11-27 15:18:18] 2025-11-27 20:17:40,432 | INFO     | mean y: 3133897.733556299
[2025-11-27 15:18:18] 2025-11-27 20:17:40,432 | INFO     | intersect: -25029522360.27248
[2025-11-27 15:18:18] 2025-11-27 20:17:40,433 | INFO     | chi2: 8.339881216165288
[2025-11-27 15:18:18] 2025-11-27 20:17:40,434 | INFO     | sum of square deviations: 220072889476.45175
[2025-11-27 15:18:18] 2025-11-27 20:17:40,451 | INFO     | sum of deviations: 3521153512247.2153
[2025-11-27 15:18:18] 2025-11-27 20:17:40,451 | INFO     | mean x: 1764247093.8912556
[2025-11-27 15:18:18] 2025-11-27 20:17:40,451 | INFO     | mean y: 3148069.4764573993
[2025-11-27 15:18:18] 2025-11-27 20:17:40,451 | INFO     | intersect: -28224703466.011536
[2025-11-27 15:18:18] 2025-11-27 20:17:40,452 | INFO     | chi2: 4.7626804122492254
[2025-11-27 15:18:18] 2025-11-27 20:17:40,452 | INFO     | current chi2=4.7626804122492254 (change=42.892706876715856 %)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,453 | INFO     | sum of square deviations: 216393088990.51657
[2025-11-27 15:18:18] 2025-11-27 20:17:40,534 | INFO     | sum of deviations: 3669700548599.669
[2025-11-27 15:18:18] 2025-11-27 20:17:40,535 | INFO     | mean x: 1764246941.3979707
[2025-11-27 15:18:18] 2025-11-27 20:17:40,535 | INFO     | mean y: 3154209.151071026
[2025-11-27 15:18:18] 2025-11-27 20:17:40,535 | INFO     | intersect: -29915814085.61344
[2025-11-27 15:18:18] 2025-11-27 20:17:40,536 | INFO     | chi2: 3.466113070093065
[2025-11-27 15:18:18] 2025-11-27 20:17:40,536 | INFO     | current chi2=3.466113070093065 (change=27.223479845960163 %)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,537 | INFO     | sum of square deviations: 212754328427.2201
[2025-11-27 15:18:18] 2025-11-27 20:17:40,591 | INFO     | sum of deviations: 3619462919864.4517
[2025-11-27 15:18:18] 2025-11-27 20:17:40,591 | INFO     | mean x: 1764246788.9002268
[2025-11-27 15:18:18] 2025-11-27 20:17:40,592 | INFO     | mean y: 3152103.732426304
[2025-11-27 15:18:18] 2025-11-27 20:17:40,592 | INFO     | intersect: -30010929777.091545
[2025-11-27 15:18:18] 2025-11-27 20:17:40,593 | INFO     | chi2: 3.463653058876385
[2025-11-27 15:18:18] 2025-11-27 20:17:40,593 | INFO     | current chi2=3.463653058876385 (change=0.07097319582289642 %)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,593 | INFO     | right removable region: 881
[2025-11-27 15:18:18] 2025-11-27 20:17:40,594 | INFO     | sum of square deviations: 220072132466.45172
[2025-11-27 15:18:18] 2025-11-27 20:17:40,610 | INFO     | sum of deviations: 2843591855636.6157
[2025-11-27 15:18:18] 2025-11-27 20:17:40,610 | INFO     | mean x: 1764247398.8912556
[2025-11-27 15:18:18] 2025-11-27 20:17:40,610 | INFO     | mean y: 3147484.2331838566
[2025-11-27 15:18:18] 2025-11-27 20:17:40,611 | INFO     | intersect: -22793012477.45588
[2025-11-27 15:18:18] 2025-11-27 20:17:40,612 | INFO     | chi2: 5.448828998154494
[2025-11-27 15:18:18] 2025-11-27 20:17:40,612 | INFO     | current chi2=5.448828998154494 (change=34.66538842791951 %)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,613 | INFO     | sum of square deviations: 216391792378.1036
[2025-11-27 15:18:18] 2025-11-27 20:17:40,628 | INFO     | sum of deviations: 2731981667356.3022
[2025-11-27 15:18:18] 2025-11-27 20:17:40,628 | INFO     | mean x: 1764247551.395716
[2025-11-27 15:18:18] 2025-11-27 20:17:40,629 | INFO     | mean y: 3152108.711386697
[2025-11-27 15:18:18] 2025-11-27 20:17:40,629 | INFO     | intersect: -22270760936.333755
[2025-11-27 15:18:18] 2025-11-27 20:17:40,630 | INFO     | chi2: 5.32518886815833
[2025-11-27 15:18:18] 2025-11-27 20:17:40,630 | INFO     | current chi2=5.32518886815833 (change=2.2691137864308217 %)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,630 | INFO     | left removable region: 20
[2025-11-27 15:18:18] 2025-11-27 20:17:40,631 | INFO     | sum of square deviations: 197915299341.95853
[2025-11-27 15:18:18] 2025-11-27 20:17:40,646 | INFO     | sum of deviations: 2988879610128.78
[2025-11-27 15:18:18] 2025-11-27 20:17:40,646 | INFO     | mean x: 1764247368.4216027
[2025-11-27 15:18:18] 2025-11-27 20:17:40,646 | INFO     | mean y: 3178309.581881533
[2025-11-27 15:18:18] 2025-11-27 20:17:40,646 | INFO     | intersect: -26640153480.487423
[2025-11-27 15:18:18] 2025-11-27 20:17:40,647 | INFO     | chi2: 0.3088747152841651
[2025-11-27 15:18:18] 2025-11-27 20:17:40,648 | INFO     | current memory leak: 15.10 B/s (using 861 data points, chi2=0.31)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | could have reported an average CPU frequency of 3358 MHz (34 samples)
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | ..............................
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . Timing measurements:
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . get job = 0 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . initial setup = 2 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . payload setup = 13 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . stage-in = 0 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . payload execution = 54721 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . stage-out = 7 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | . log creation = 2 s
[2025-11-27 15:18:18] 2025-11-27 20:17:40,649 | INFO     | ..............................
[2025-11-27 15:18:18] 2025-11-27 20:17:41,012 | INFO     | 
[2025-11-27 15:18:18] 2025-11-27 20:17:41,012 | INFO     | job summary report
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | --------------------------------------------------
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | PanDA job id: 6898175063
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | task id: 47556161
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | errors: (none)
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | pilot state: finished 
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | transexitcode: 0
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | exeerrorcode: 0
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | exeerrordiag: 
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | exitcode: 0
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | exitmsg: OK
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | cpuconsumptiontime: 183457 s
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | nevents: 1000
[2025-11-27 15:18:18] 2025-11-27 20:17:41,013 | INFO     | neventsw: 0
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | pid: 621266
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | pgrp: 621266
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | corecount: 9
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | event service: False
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | sizes: {0: 2283436, 1: 2284292, 9: 2284554, 12: 2284582, 54739: 2334221, 54740: 2334220, 54748: 2343398, 54750: 2343454, 54767: 2343700}
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | --------------------------------------------------
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | 
[2025-11-27 15:18:18] 2025-11-27 20:17:41,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,162 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | job 6898175063 has completed (purged errors)
[2025-11-27 15:18:18] 2025-11-27 20:17:41,163 | INFO     | overall cleanup function is called
[2025-11-27 15:18:18] 2025-11-27 20:17:42,258 | INFO     | --- collectZombieJob: --- 10, [621266]
[2025-11-27 15:18:18] 2025-11-27 20:17:42,258 | INFO     | zombie collector waiting for pid 621266
[2025-11-27 15:18:18] 2025-11-27 20:17:42,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 15:18:18] 2025-11-27 20:17:42,259 | INFO     | collected zombie processes
[2025-11-27 15:18:18] 2025-11-27 20:17:42,259 | INFO     | will attempt to kill all subprocesses of pid=621266
[2025-11-27 15:18:18] 2025-11-27 20:17:46,430 | INFO     | process IDs to be killed: [621266] (in reverse order)
[2025-11-27 15:18:18] 2025-11-27 20:17:46,762 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 15:18:18] 2025-11-27 20:17:46,762 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 15:18:18] 2025-11-27 20:17:46,795 | INFO     | did not find any defunct processes belonging to 621266
[2025-11-27 15:18:18] 2025-11-27 20:17:47,096 | INFO     | did not find any defunct processes belonging to 621266
[2025-11-27 15:18:18] 2025-11-27 20:17:47,127 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 15:18:18] 2025-11-27 20:17:47,127 | INFO     | ready for new job
[2025-11-27 15:18:18] 2025-11-27 20:17:47,127 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 15:18:18] 2025-11-27 20:17:47,157 | INFO     | ***************************************
[2025-11-27 15:18:18] 2025-11-27 20:17:47,157 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 15:18:18] 2025-11-27 20:17:47,157 | INFO     | ***************************************
[2025-11-27 15:18:18] 2025-11-27 20:17:47,157 | INFO     | 
[2025-11-27 15:18:18] 2025-11-27 20:17:47,191 | INFO     | architecture information:
[2025-11-27 15:18:18] 2025-11-27 20:17:47,218 | INFO     | executing command: cat /etc/os-release
[2025-11-27 15:18:18] 2025-11-27 20:17:47,331 | INFO     | cat /etc/os-release:
[2025-11-27 15:18:18] NAME="CentOS Linux"
[2025-11-27 15:18:18] VERSION="7 (Core)"
[2025-11-27 15:18:18] ID="centos"
[2025-11-27 15:18:18] ID_LIKE="rhel fedora"
[2025-11-27 15:18:18] VERSION_ID="7"
[2025-11-27 15:18:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 15:18:18] ANSI_COLOR="0;31"
[2025-11-27 15:18:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 15:18:18] HOME_URL="https://www.centos.org/"
[2025-11-27 15:18:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 15:18:18] 
[2025-11-27 15:18:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 15:18:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 15:18:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 15:18:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 15:18:18] 
[2025-11-27 15:18:18] 2025-11-27 20:17:47,332 | INFO     | ***************************************
[2025-11-27 15:18:18] 2025-11-27 20:17:47,855 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 15:18:18] 2025-11-27 20:17:47,922 | INFO     | sufficient remaining disk space (120694243328 B)
[2025-11-27 15:18:18] 2025-11-27 20:17:47,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 15:18:18] 2025-11-27 20:17:47,922 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 15:18:18] 2025-11-27 20:17:47,922 | INFO     | update_server=False
[2025-11-27 15:18:18] 2025-11-27 20:17:47,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 15:18:18] 2025-11-27 20:17:47,924 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 15:18:18] 2025-11-27 20:17:48,018 | INFO     | all payload control threads have been joined
[2025-11-27 15:18:18] 2025-11-27 20:17:48,121 | INFO     | all job control threads have been joined
[2025-11-27 15:18:18] 2025-11-27 20:17:48,257 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 15:18:18] 2025-11-27 20:17:48,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:18:18] 2025-11-27 20:17:48,830 | INFO     | aborting loop
[2025-11-27 15:18:18] 2025-11-27 20:17:48,927 | INFO     | all data control threads have been joined
[2025-11-27 15:18:18] 2025-11-27 20:17:48,928 | INFO     | [job] retrieve thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,011 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,023 | INFO     | [payload] control thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,040 | INFO     | [payload] validate_post thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,127 | INFO     | [job] control thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,268 | INFO     | [data] copytool_in thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,280 | INFO     | [job] validate thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,280 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,605 | INFO     | [payload] failed_post thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 15:18:18] 2025-11-27 20:17:49,841 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,842 | INFO     | [job] job monitor thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,933 | INFO     | [data] copytool_out thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:49,940 | INFO     | [data] control thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:50,844 | INFO     | [job] queue monitor thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:17:52,286 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 15:18:18] 2025-11-27 20:18:09,905 | INFO     | [monitor] cgroup control has ended
[2025-11-27 15:18:18] 2025-11-27 20:18:10,652 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139679810508608)>', '<ExcThread(monitor, started 139679164782336)>']
[2025-11-27 15:18:18] 2025-11-27 20:18:15,685 | INFO     | all workflow threads have been joined
[2025-11-27 15:18:18] 2025-11-27 20:18:15,685 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 15:18:18] 2025-11-27 20:18:15,686 | INFO     | traces error code: 0
[2025-11-27 15:18:18] 2025-11-27 20:18:15,686 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 15:18:18] 2025-11-27 20:18:16,448 | INFO     | PID=596705 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 15:18:18] 2025-11-27 20:18:16,449 | INFO     | .. there are 84 such processes running
[2025-11-27 15:18:18] 2025-11-27 20:18:16,449 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 15:18:18] 2025-11-27 20:18:16,449 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 15:18:18] 2025-11-27 20:18:16,449 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 15:18:18] 2025-11-27 20:18:16,449 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 15:18:18] 2025-11-27 20:18:16,449 | INFO     | [monitor] control thread has ended
[2025-11-27 15:18:18] 2025-11-27 20:18:17,360 [wrapper] ==== pilot stdout END ====
[2025-11-27 15:18:18] 2025-11-27 20:18:17,380 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 15:18:18] 2025-11-27 20:18:17,387 [wrapper] pilotpid: 596705
[2025-11-27 15:18:18] 2025-11-27 20:18:17,420 [wrapper] Pilot exit status: 0
[2025-11-27 15:18:18] 2025-11-27 20:18:17,496 [wrapper] pandaids: 6898175063
[2025-11-27 15:18:18] 2025-11-27 20:18:17,794 [wrapper] cleanup supervisor_pilot 2376465 596708
[2025-11-27 15:18:18] 2025-11-27 20:18:17,827 [wrapper] Test setup, not cleaning
[2025-11-27 15:18:18] 2025-11-27 20:18:17,839 [wrapper] apfmon messages muted
[2025-11-27 15:18:18] 2025-11-27 20:18:17,842 [wrapper] ==== wrapper stdout END ====
[2025-11-27 15:18:18] 2025-11-27 20:18:17,849 [wrapper] ==== wrapper stderr END ====
[2025-11-27 15:18:18]  *** Error codes and diagnostics ***
[2025-11-27 15:18:18]     "exeErrorCode": 0,
[2025-11-27 15:18:18]     "exeErrorDiag": "",
[2025-11-27 15:18:18]     "pilotErrorCode": 0,
[2025-11-27 15:18:18]     "pilotErrorDiag": "",
[2025-11-27 15:18:18]  *** Listing of results directory ***
[2025-11-27 15:18:18] total 1317560
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 15:18:18] -rwx------. 1 boincer umatlas     36292 Nov 25 22:50 runpilot2-wrapper.sh
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 15:18:18] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:04 run_atlas
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:04 job.xml
[2025-11-27 15:18:18] -rw-r--r--. 2 boincer umatlas 409686165 Nov 27 00:04 EVNT.47483658._002453.pool.root.1
[2025-11-27 15:18:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 15:18:18] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:04 shared
[2025-11-27 15:18:18] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:04 input.tar.gz
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:04 boinc_lockfile
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:04 pandaJob.out
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas        57 Nov 27 00:04 setup.sh.local
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas    991570 Nov 27 00:04 agis_schedconf.cvmfs.json
[2025-11-27 15:18:18] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas       533 Nov 27 15:06 boinc_task_state.xml
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas      6945 Nov 27 15:11 init_data.xml
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas 917957409 Nov 27 15:16 HITS.47556161._004355.pool.root.1
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas      1076 Nov 27 15:17 memory_monitor_summary.json
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas   2158116 Nov 27 15:17 log.47556161._004355.job.log.tgz.1
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas        95 Nov 27 15:17 pilot_heartbeat.json
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas      8639 Nov 27 15:17 heartbeat.json
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 15:18 boinc_mmap_file
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas        29 Nov 27 15:18 wrapper_checkpoint.txt
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas       822 Nov 27 15:18 pilotlog.txt
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas   6652661 Nov 27 15:18 log.47556161._004355.job.log.1
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas       353 Nov 27 15:18 output.list
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:18 runtime_log
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas   8826880 Nov 27 15:18 result.tar.gz
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 15:18 runtime_log.err
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas       665 Nov 27 15:18 8GgKDmoiLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdsMKDmCHsYlm.diag
[2025-11-27 15:18:18] -rw-r--r--. 1 boincer umatlas     21139 Nov 27 15:18 stderr.txt
[2025-11-27 15:18:18] HITS file was successfully produced:
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas 917957409 Nov 27 15:16 shared/HITS.pool.root.1
[2025-11-27 15:18:18]  *** Contents of shared directory: ***
[2025-11-27 15:18:18] total 1305756
[2025-11-27 15:18:18] -rw-r--r--. 2 boincer umatlas 409686165 Nov 27 00:04 ATLAS.root_0
[2025-11-27 15:18:18] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 15:18:18] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:04 input.tar.gz
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas 917957409 Nov 27 15:16 HITS.pool.root.1
[2025-11-27 15:18:18] -rw-------. 1 boincer umatlas   8826880 Nov 27 15:18 result.tar.gz
15:18:20 (583870): run_atlas exited; CPU time 184702.494860
15:18:20 (583870): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN