Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:34 (1354286): wrapper (7.7.26015): starting
00:04:34 (1354286): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:04:34] Arguments: --nthreads 8
[2025-11-27 00:04:34] Threads: 8
[2025-11-27 00:04:34] Checking for CVMFS
[2025-11-27 00:04:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:04:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:04:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:04:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:04:36] 2.13.2.0 2325231 31626 173612 153347 1 640 39129821 40960001 37168 16776704 0 226904734 99.712 189339979 52223 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:04:36] CVMFS is ok
[2025-11-27 00:04:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:04:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:04:36] Further information can be found at the LHC@home message board.
[2025-11-27 00:04:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:04:36] Checking for apptainer binary...
[2025-11-27 00:04:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:04:36] Running /usr/bin/apptainer --version
[2025-11-27 00:04:36] apptainer version 1.4.4-1.el9
[2025-11-27 00:04:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:04:37] c-208-37.aglt2.org
[2025-11-27 00:04:37] apptainer works
[2025-11-27 00:04:37] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:04:37] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:04:37] Starting ATLAS job with PandaID=6898176659
[2025-11-27 00:04:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:57:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:57:17] 2025-11-28 00:56:15,171 | INFO     | monitor loop #4136: job 0:6898176659 is in state 'finished'
[2025-11-27 19:57:17] 2025-11-28 00:56:15,172 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:57:17] 2025-11-28 00:56:15,548 | INFO     | time since job start (71411s) is within the limit (172800.0s)
[2025-11-27 19:57:17] 2025-11-28 00:56:15,758 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 19:57:17] 2025-11-28 00:56:15,777 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3727.3113515624977
[2025-11-27 19:57:17] 2025-11-28 00:56:15,823 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6898176659/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:57:17] 2025-11-28 00:56:15,834 | INFO     | extracted standard info from prmon json
[2025-11-27 19:57:17] 2025-11-28 00:56:15,834 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:57:17] 2025-11-28 00:56:15,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:57:17] 2025-11-28 00:56:15,864 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:57:17] 2025-11-28 00:56:15,872 | INFO     | sum of square deviations: 492820045420.95807
[2025-11-27 19:57:17] 2025-11-28 00:56:15,948 | INFO     | sum of deviations: 2994124346795.307
[2025-11-27 19:57:17] 2025-11-28 00:56:15,948 | INFO     | mean x: 1764255745.0059984
[2025-11-27 19:57:17] 2025-11-28 00:56:15,948 | INFO     | mean y: 2820995.9554413026
[2025-11-27 19:57:17] 2025-11-28 00:56:15,948 | INFO     | intersect: -10715901038.948437
[2025-11-27 19:57:17] 2025-11-28 00:56:15,953 | INFO     | chi2: 13.62263081781486
[2025-11-27 19:57:17] 2025-11-28 00:56:15,953 | INFO     | sum of square deviations: 486513376028.2511
[2025-11-27 19:57:17] 2025-11-28 00:56:15,986 | INFO     | sum of deviations: 3391503588477.972
[2025-11-27 19:57:17] 2025-11-28 00:56:15,986 | INFO     | mean x: 1764255592.5146298
[2025-11-27 19:57:17] 2025-11-28 00:56:15,986 | INFO     | mean y: 2830603.6488812394
[2025-11-27 19:57:17] 2025-11-28 00:56:15,986 | INFO     | intersect: -12295863466.908895
[2025-11-27 19:57:17] 2025-11-28 00:56:15,987 | INFO     | chi2: 10.31101407892936
[2025-11-27 19:57:17] 2025-11-28 00:56:15,987 | INFO     | current chi2=10.31101407892936 (change=24.309671040594942 %)
[2025-11-27 19:57:17] 2025-11-28 00:56:15,987 | INFO     | right removable region: 1161
[2025-11-27 19:57:17] 2025-11-28 00:56:15,988 | INFO     | sum of square deviations: 486511948018.2516
[2025-11-27 19:57:17] 2025-11-28 00:56:16,019 | INFO     | sum of deviations: 2525116623125.007
[2025-11-27 19:57:17] 2025-11-28 00:56:16,019 | INFO     | mean x: 1764255897.5146298
[2025-11-27 19:57:17] 2025-11-28 00:56:16,019 | INFO     | mean y: 2832333.2056798623
[2025-11-27 19:57:17] 2025-11-28 00:56:16,020 | INFO     | intersect: -9154089531.523926
[2025-11-27 19:57:17] 2025-11-28 00:56:16,020 | INFO     | chi2: 9.2047266887863
[2025-11-27 19:57:17] 2025-11-28 00:56:16,020 | INFO     | current chi2=9.2047266887863 (change=32.43062362998996 %)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,021 | INFO     | sum of square deviations: 480257969269.41595
[2025-11-27 19:57:17] 2025-11-28 00:56:16,054 | INFO     | sum of deviations: 2135005839460.2578
[2025-11-27 19:57:17] 2025-11-28 00:56:16,055 | INFO     | mean x: 1764256050.022472
[2025-11-27 19:57:17] 2025-11-28 00:56:16,055 | INFO     | mean y: 2841844.4900605013
[2025-11-27 19:57:17] 2025-11-28 00:56:16,055 | INFO     | intersect: -7840228359.69851
[2025-11-27 19:57:17] 2025-11-28 00:56:16,055 | INFO     | chi2: 6.246378720020971
[2025-11-27 19:57:17] 2025-11-28 00:56:16,055 | INFO     | current chi2=6.246378720020971 (change=32.139443883427305 %)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,056 | INFO     | sum of square deviations: 474058016367.11224
[2025-11-27 19:57:17] 2025-11-28 00:56:16,086 | INFO     | sum of deviations: 1955661411780.9224
[2025-11-27 19:57:17] 2025-11-28 00:56:16,086 | INFO     | mean x: 1764256202.5277777
[2025-11-27 19:57:17] 2025-11-28 00:56:16,086 | INFO     | mean y: 2846251.3619791665
[2025-11-27 19:57:17] 2025-11-28 00:56:16,087 | INFO     | intersect: -7275351050.773309
[2025-11-27 19:57:17] 2025-11-28 00:56:16,087 | INFO     | chi2: 5.58758536116659
[2025-11-27 19:57:17] 2025-11-28 00:56:16,087 | INFO     | current chi2=5.58758536116659 (change=10.546804610850897 %)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,087 | INFO     | left removable region: 30
[2025-11-27 19:57:17] 2025-11-28 00:56:16,088 | INFO     | sum of square deviations: 448603043007.04706
[2025-11-27 19:57:17] 2025-11-28 00:56:16,117 | INFO     | sum of deviations: 2216199614414.678
[2025-11-27 19:57:17] 2025-11-28 00:56:16,117 | INFO     | mean x: 1764256477.0415561
[2025-11-27 19:57:17] 2025-11-28 00:56:16,117 | INFO     | mean y: 2864082.091954023
[2025-11-27 19:57:17] 2025-11-28 00:56:16,117 | INFO     | intersect: -8712958481.079279
[2025-11-27 19:57:17] 2025-11-28 00:56:16,118 | INFO     | chi2: 1.2157324940012821
[2025-11-27 19:57:17] 2025-11-28 00:56:16,118 | INFO     | current memory leak: 4.94 B/s (using 1131 data points, chi2=1.22)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | could have reported an average CPU frequency of 3710 MHz (42 samples)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | ..............................
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . Timing measurements:
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . get job = 0 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . initial setup = 5 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . payload setup = 64 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . stage-in = 0 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . payload execution = 71206 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . stage-out = 5 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | . log creation = 1 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,119 | INFO     | ..............................
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | 
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | job summary report
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | --------------------------------------------------
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | PanDA job id: 6898176659
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | task id: 47556161
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | errors: (none)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | pilot state: finished 
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | transexitcode: 0
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | exeerrorcode: 0
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | exeerrordiag: 
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | exitcode: 0
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | exitmsg: OK
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | cpuconsumptiontime: 146736 s
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | nevents: 1000
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | neventsw: 0
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | pid: 1425439
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | pgrp: 1425439
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | corecount: 8
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | event service: False
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | sizes: {0: 2284038, 1: 2284293, 12: 2284293, 23: 2284321, 34: 2284349, 45: 2284795, 56: 2284795, 71275: 2341655, 71281: 2350707, 71310: 2350897}
[2025-11-27 19:57:17] 2025-11-28 00:56:16,225 | INFO     | --------------------------------------------------
[2025-11-27 19:57:17] 2025-11-28 00:56:16,226 | INFO     | 
[2025-11-27 19:57:17] 2025-11-28 00:56:16,226 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,314 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | job 6898176659 has completed (purged errors)
[2025-11-27 19:57:17] 2025-11-28 00:56:16,315 | INFO     | overall cleanup function is called
[2025-11-27 19:57:17] 2025-11-28 00:56:17,339 | INFO     | --- collectZombieJob: --- 10, [1425439]
[2025-11-27 19:57:17] 2025-11-28 00:56:17,340 | INFO     | zombie collector waiting for pid 1425439
[2025-11-27 19:57:17] 2025-11-28 00:56:17,340 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:57:17] 2025-11-28 00:56:17,340 | INFO     | collected zombie processes
[2025-11-27 19:57:17] 2025-11-28 00:56:17,340 | INFO     | will attempt to kill all subprocesses of pid=1425439
[2025-11-27 19:57:17] 2025-11-28 00:56:18,336 | INFO     | process IDs to be killed: [1425439] (in reverse order)
[2025-11-27 19:57:17] 2025-11-28 00:56:18,632 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:57:17] 2025-11-28 00:56:18,633 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:57:17] 2025-11-28 00:56:18,684 | INFO     | did not find any defunct processes belonging to 1425439
[2025-11-27 19:57:17] 2025-11-28 00:56:18,706 | INFO     | did not find any defunct processes belonging to 1425439
[2025-11-27 19:57:17] 2025-11-28 00:56:18,710 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:57:17] 2025-11-28 00:56:18,711 | INFO     | ready for new job
[2025-11-27 19:57:17] 2025-11-28 00:56:18,711 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:57:17] 2025-11-28 00:56:18,714 | INFO     | ***************************************
[2025-11-27 19:57:17] 2025-11-28 00:56:18,714 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:57:17] 2025-11-28 00:56:18,714 | INFO     | ***************************************
[2025-11-27 19:57:17] 2025-11-28 00:56:18,714 | INFO     | 
[2025-11-27 19:57:17] 2025-11-28 00:56:18,718 | INFO     | architecture information:
[2025-11-27 19:57:17] 2025-11-28 00:56:18,722 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:57:17] 2025-11-28 00:56:18,766 | INFO     | cat /etc/os-release:
[2025-11-27 19:57:17] NAME="CentOS Linux"
[2025-11-27 19:57:17] VERSION="7 (Core)"
[2025-11-27 19:57:17] ID="centos"
[2025-11-27 19:57:17] ID_LIKE="rhel fedora"
[2025-11-27 19:57:17] VERSION_ID="7"
[2025-11-27 19:57:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:57:17] ANSI_COLOR="0;31"
[2025-11-27 19:57:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:57:17] HOME_URL="https://www.centos.org/"
[2025-11-27 19:57:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:57:17] 
[2025-11-27 19:57:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:57:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:57:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:57:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:57:17] 
[2025-11-27 19:57:17] 2025-11-28 00:56:18,766 | INFO     | ***************************************
[2025-11-27 19:57:17] 2025-11-28 00:56:19,270 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-27 19:57:17] 2025-11-28 00:56:19,321 | INFO     | sufficient remaining disk space (164524720128 B)
[2025-11-27 19:57:17] 2025-11-28 00:56:19,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:57:17] 2025-11-28 00:56:19,321 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:57:17] 2025-11-28 00:56:19,321 | INFO     | update_server=False
[2025-11-27 19:57:17] 2025-11-28 00:56:19,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:57:17] 2025-11-28 00:56:19,322 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:57:17] 2025-11-28 00:56:19,322 | INFO     | aborting loop
[2025-11-27 19:57:17] 2025-11-28 00:56:19,339 | INFO     | all payload control threads have been joined
[2025-11-27 19:57:17] 2025-11-28 00:56:19,489 | INFO     | all data control threads have been joined
[2025-11-27 19:57:17] 2025-11-28 00:56:19,642 | INFO     | all job control threads have been joined
[2025-11-27 19:57:17] 2025-11-28 00:56:20,086 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:57:17] 2025-11-28 00:56:20,230 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:57:17] 2025-11-28 00:56:20,328 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,328 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,352 | INFO     | [payload] control thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,386 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,494 | INFO     | [data] control thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,648 | INFO     | [job] control thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,759 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:20,874 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:21,039 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:21,211 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:21,229 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:21,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:57:17] 2025-11-28 00:56:21,459 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:21,518 | INFO     | [job] validate thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:22,097 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:22,245 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:24,241 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:57:17] 2025-11-28 00:56:52,849 | INFO     | PID=1372126 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:57:17] 2025-11-28 00:56:52,849 | INFO     | .. there are 27 such processes running
[2025-11-27 19:57:17] 2025-11-28 00:56:52,854 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:57:17] 2025-11-28 00:56:52,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:57:17] 2025-11-28 00:56:52,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:57:17] 2025-11-28 00:57:10,247 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:57:17] 2025-11-28 00:57:10,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139915406833472)>', '<ExcThread(monitor, started 139914909828864)>']
[2025-11-27 19:57:17] 2025-11-28 00:57:10,997 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:57:17] 2025-11-28 00:57:10,998 | INFO     | [monitor] control thread has ended
[2025-11-27 19:57:17] 2025-11-28 00:57:15,454 | INFO     | all workflow threads have been joined
[2025-11-27 19:57:17] 2025-11-28 00:57:15,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:57:17] 2025-11-28 00:57:15,455 | INFO     | traces error code: 0
[2025-11-27 19:57:17] 2025-11-28 00:57:15,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:57:17] 2025-11-28 00:57:15,800 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:57:17] 2025-11-28 00:57:15,830 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:57:17] 2025-11-28 00:57:15,852 [wrapper] pilotpid: 1372126
[2025-11-27 19:57:17] 2025-11-28 00:57:15,882 [wrapper] Pilot exit status: 0
[2025-11-27 19:57:17] 2025-11-28 00:57:15,969 [wrapper] pandaids: 6898176659
[2025-11-27 19:57:17] 2025-11-28 00:57:16,311 [wrapper] cleanup supervisor_pilot 1939933 1372127
[2025-11-27 19:57:17] 2025-11-28 00:57:16,347 [wrapper] Test setup, not cleaning
[2025-11-27 19:57:17] 2025-11-28 00:57:16,359 [wrapper] apfmon messages muted
[2025-11-27 19:57:17] 2025-11-28 00:57:16,376 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:57:17] 2025-11-28 00:57:16,398 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:57:17]  *** Error codes and diagnostics ***
[2025-11-27 19:57:17]     "exeErrorCode": 0,
[2025-11-27 19:57:17]     "exeErrorDiag": "",
[2025-11-27 19:57:17]     "pilotErrorCode": 0,
[2025-11-27 19:57:17]     "pilotErrorDiag": "",
[2025-11-27 19:57:17]  *** Listing of results directory ***
[2025-11-27 19:57:17] total 1318812
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:57 queuedata.json
[2025-11-27 19:57:17] -rwx------. 1 boincer umatlas     36292 Nov 25 23:00 runpilot2-wrapper.sh
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:57:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:04 run_atlas
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:04 job.xml
[2025-11-27 19:57:17] -rw-r--r--. 2 boincer umatlas 411399162 Nov 27 00:04 EVNT.47483658._002463.pool.root.1
[2025-11-27 19:57:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 19:57:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:04 shared
[2025-11-27 19:57:17] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:04 input.tar.gz
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:04 boinc_lockfile
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:04 pandaJob.out
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas        57 Nov 27 00:04 setup.sh.local
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 19:57:17] drwx------. 5 boincer umatlas      4096 Nov 27 00:06 pilot3
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas      7177 Nov 27 19:45 init_data.xml
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:46 boinc_task_state.xml
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas 913076681 Nov 27 19:54 HITS.47556161._004455.pool.root.1
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas      1068 Nov 27 19:55 memory_monitor_summary.json
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:55 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas   2231037 Nov 27 19:55 log.47556161._004455.job.log.tgz.1
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas      8614 Nov 27 19:56 heartbeat.json
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas        95 Nov 27 19:56 pilot_heartbeat.json
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:57 boinc_mmap_file
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:57 wrapper_checkpoint.txt
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas      4826 Nov 27 19:57 pilotlog.txt
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas   8800173 Nov 27 19:57 log.47556161._004455.job.log.1
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas       353 Nov 27 19:57 output.list
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:57 runtime_log
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas  11048960 Nov 27 19:57 result.tar.gz
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas       665 Nov 27 19:57 TUtMDmssLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3tMKDmmg8WUo.diag
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas      9361 Nov 27 19:57 runtime_log.err
[2025-11-27 19:57:17] -rw-r--r--. 1 boincer umatlas     21370 Nov 27 19:57 stderr.txt
[2025-11-27 19:57:17] HITS file was successfully produced:
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas 913076681 Nov 27 19:54 shared/HITS.pool.root.1
[2025-11-27 19:57:17]  *** Contents of shared directory: ***
[2025-11-27 19:57:17] total 1304836
[2025-11-27 19:57:17] -rw-r--r--. 2 boincer umatlas 411399162 Nov 27 00:04 ATLAS.root_0
[2025-11-27 19:57:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 19:57:17] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:04 input.tar.gz
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas 913076681 Nov 27 19:54 HITS.pool.root.1
[2025-11-27 19:57:17] -rw-------. 1 boincer umatlas  11048960 Nov 27 19:57 result.tar.gz
19:57:39 (1354286): run_atlas exited; CPU time 147310.384476
19:57:39 (1354286): called boinc_finish(0)

</stderr_txt>
]]>

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