Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:28 (3070825): wrapper (7.7.26015): starting
00:03:28 (3070825): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:03:28] Arguments: --nthreads 9
[2025-11-27 00:03:28] Threads: 9
[2025-11-27 00:03:28] Checking for CVMFS
[2025-11-27 00:03:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:28] 2.13.3.0 12500 31046 236560 153347 2 693 19868872 32503809 60013 16776704 0 210316342 99.526 246485517 37168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:28] CVMFS is ok
[2025-11-27 00:03:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:28] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:28] Checking for apptainer binary...
[2025-11-27 00:03:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:28] Running /usr/bin/apptainer --version
[2025-11-27 00:03:29] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:29] c7-7-36.aglt2.org
[2025-11-27 00:03:29] apptainer works
[2025-11-27 00:03:29] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:03:29] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:03:29] Starting ATLAS job with PandaID=6897373283
[2025-11-27 00:03:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:21:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:21:55] 2025-11-28 00:21:16,457 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897373283/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,458 | INFO     | extracted standard info from prmon json
[2025-11-27 19:21:55] 2025-11-28 00:21:16,458 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:21:55] 2025-11-28 00:21:16,458 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:21:55] 2025-11-28 00:21:16,474 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:21:55] 2025-11-28 00:21:16,477 | INFO     | sum of square deviations: 457000834530.851
[2025-11-27 19:21:55] 2025-11-28 00:21:16,495 | INFO     | monitor loop #4295: job 0:6897373283 is in state 'finished'
[2025-11-27 19:21:55] 2025-11-28 00:21:16,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,528 | INFO     | sum of deviations: 2181345709523.745
[2025-11-27 19:21:55] 2025-11-28 00:21:16,528 | INFO     | mean x: 1764254545.824253
[2025-11-27 19:21:55] 2025-11-28 00:21:16,528 | INFO     | mean y: 3211743.378734622
[2025-11-27 19:21:55] 2025-11-28 00:21:16,528 | INFO     | intersect: -8417886848.251295
[2025-11-27 19:21:55] 2025-11-28 00:21:16,533 | INFO     | chi2: 9.335946896055072
[2025-11-27 19:21:55] 2025-11-28 00:21:16,534 | INFO     | sum of square deviations: 451004149154.5468
[2025-11-27 19:21:55] 2025-11-28 00:21:16,610 | INFO     | sum of deviations: 2642864753875.3706
[2025-11-27 19:21:55] 2025-11-28 00:21:16,610 | INFO     | mean x: 1764254393.3300972
[2025-11-27 19:21:55] 2025-11-28 00:21:16,610 | INFO     | mean y: 3223479.646072374
[2025-11-27 19:21:55] 2025-11-28 00:21:16,610 | INFO     | intersect: -10335230749.084566
[2025-11-27 19:21:55] 2025-11-28 00:21:16,611 | INFO     | chi2: 5.697043101231531
[2025-11-27 19:21:55] 2025-11-28 00:21:16,611 | INFO     | current chi2=5.697043101231531 (change=38.97734033128626 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,612 | INFO     | sum of square deviations: 445060093573.3295
[2025-11-27 19:21:55] 2025-11-28 00:21:16,666 | INFO     | sum of deviations: 3009290014568.909
[2025-11-27 19:21:55] 2025-11-28 00:21:16,666 | INFO     | mean x: 1764254240.8351064
[2025-11-27 19:21:55] 2025-11-28 00:21:16,666 | INFO     | mean y: 3232873.9618794327
[2025-11-27 19:21:55] 2025-11-28 00:21:16,666 | INFO     | intersect: -11925836361.33945
[2025-11-27 19:21:55] 2025-11-28 00:21:16,667 | INFO     | chi2: 3.135972476441813
[2025-11-27 19:21:55] 2025-11-28 00:21:16,667 | INFO     | current chi2=3.135972476441813 (change=44.954383866888605 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,672 | INFO     | sum of square deviations: 439167816496.77313
[2025-11-27 19:21:55] 2025-11-28 00:21:16,719 | INFO     | sum of deviations: 3074456461185.396
[2025-11-27 19:21:55] 2025-11-28 00:21:16,720 | INFO     | mean x: 1764254088.3312557
[2025-11-27 19:21:55] 2025-11-28 00:21:16,720 | INFO     | mean y: 3234555.4559216383
[2025-11-27 19:21:55] 2025-11-28 00:21:16,720 | INFO     | intersect: -12347675910.41296
[2025-11-27 19:21:55] 2025-11-28 00:21:16,721 | INFO     | chi2: 2.8903754715389
[2025-11-27 19:21:55] 2025-11-28 00:21:16,721 | INFO     | current chi2=2.8903754715389 (change=7.831605881362071 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,721 | INFO     | right removable region: 1122
[2025-11-27 19:21:55] 2025-11-28 00:21:16,726 | INFO     | sum of square deviations: 451003368357.861
[2025-11-27 19:21:55] 2025-11-28 00:21:16,797 | INFO     | sum of deviations: 1838031581131.7334
[2025-11-27 19:21:55] 2025-11-28 00:21:16,797 | INFO     | mean x: 1764254698.328332
[2025-11-27 19:21:55] 2025-11-28 00:21:16,797 | INFO     | mean y: 3220462.6001765225
[2025-11-27 19:21:55] 2025-11-28 00:21:16,797 | INFO     | intersect: -7186871851.997481
[2025-11-27 19:21:55] 2025-11-28 00:21:16,798 | INFO     | chi2: 7.056909381524287
[2025-11-27 19:21:55] 2025-11-28 00:21:16,798 | INFO     | current chi2=7.056909381524287 (change=24.41142328577081 %)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,798 | INFO     | left removable region: 10
[2025-11-27 19:21:55] 2025-11-28 00:21:16,799 | INFO     | sum of square deviations: 426388312028.8845
[2025-11-27 19:21:55] 2025-11-28 00:21:16,869 | INFO     | sum of deviations: 2586582946424.4233
[2025-11-27 19:21:55] 2025-11-28 00:21:16,869 | INFO     | mean x: 1764254362.8354316
[2025-11-27 19:21:55] 2025-11-28 00:21:16,870 | INFO     | mean y: 3246979.6744604316
[2025-11-27 19:21:55] 2025-11-28 00:21:16,870 | INFO     | intersect: -10699181110.699368
[2025-11-27 19:21:55] 2025-11-28 00:21:16,879 | INFO     | chi2: 0.36759003641497967
[2025-11-27 19:21:55] 2025-11-28 00:21:16,879 | INFO     | current memory leak: 6.07 B/s (using 1112 data points, chi2=0.37)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | could have reported an average CPU frequency of 3203 MHz (42 samples)
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | ..............................
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | . Timing measurements:
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | . get job = 0 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | . initial setup = 3 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | . payload setup = 10 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | . stage-in = 0 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,880 | INFO     | . payload execution = 69387 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,881 | INFO     | . stage-out = 7 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,881 | INFO     | . log creation = 2 s
[2025-11-27 19:21:55] 2025-11-28 00:21:16,881 | INFO     | ..............................
[2025-11-27 19:21:55] 2025-11-28 00:21:17,509 | INFO     | 
[2025-11-27 19:21:55] 2025-11-28 00:21:17,513 | INFO     | job summary report
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | --------------------------------------------------
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | PanDA job id: 6897373283
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | task id: 47556161
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | errors: (none)
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | pilot state: finished 
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | transexitcode: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | exeerrorcode: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | exeerrordiag: 
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | exitcode: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | exitmsg: OK
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | cpuconsumptiontime: 197852 s
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | nevents: 1000
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | neventsw: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | pid: 3092405
[2025-11-27 19:21:55] 2025-11-28 00:21:17,514 | INFO     | pgrp: 3092405
[2025-11-27 19:21:55] 2025-11-28 00:21:17,515 | INFO     | corecount: 9
[2025-11-27 19:21:55] 2025-11-28 00:21:17,515 | INFO     | event service: False
[2025-11-27 19:21:55] 2025-11-28 00:21:17,515 | INFO     | sizes: {0: 2284094, 1: 2284293, 9: 2284555, 11: 2284583, 69399: 2342818, 69408: 2351812, 69409: 2351996, 69430: 2352242}
[2025-11-27 19:21:55] 2025-11-28 00:21:17,515 | INFO     | --------------------------------------------------
[2025-11-27 19:21:55] 2025-11-28 00:21:17,515 | INFO     | 
[2025-11-27 19:21:55] 2025-11-28 00:21:17,515 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 19:21:55] 2025-11-28 00:21:17,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:21:55] 2025-11-28 00:21:17,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:21:55] 2025-11-28 00:21:17,578 | INFO     | job 6897373283 has completed (purged errors)
[2025-11-27 19:21:55] 2025-11-28 00:21:17,578 | INFO     | overall cleanup function is called
[2025-11-27 19:21:55] 2025-11-28 00:21:18,666 | INFO     | --- collectZombieJob: --- 10, [3092405]
[2025-11-27 19:21:55] 2025-11-28 00:21:18,666 | INFO     | zombie collector waiting for pid 3092405
[2025-11-27 19:21:55] 2025-11-28 00:21:18,667 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:21:55] 2025-11-28 00:21:18,667 | INFO     | collected zombie processes
[2025-11-27 19:21:55] 2025-11-28 00:21:18,667 | INFO     | will attempt to kill all subprocesses of pid=3092405
[2025-11-27 19:21:55] 2025-11-28 00:21:19,974 | INFO     | PID=3078623 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:21:55] 2025-11-28 00:21:19,974 | INFO     | .. there are 75 such processes running
[2025-11-27 19:21:55] 2025-11-28 00:21:20,619 | INFO     | process IDs to be killed: [3092405] (in reverse order)
[2025-11-27 19:21:55] 2025-11-28 00:21:21,220 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:21:55] 2025-11-28 00:21:21,220 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:21:55] 2025-11-28 00:21:21,272 | INFO     | did not find any defunct processes belonging to 3092405
[2025-11-27 19:21:55] 2025-11-28 00:21:21,366 | INFO     | did not find any defunct processes belonging to 3092405
[2025-11-27 19:21:55] 2025-11-28 00:21:21,367 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:21:55] 2025-11-28 00:21:21,368 | INFO     | ready for new job
[2025-11-27 19:21:55] 2025-11-28 00:21:21,368 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:21:55] 2025-11-28 00:21:21,399 | INFO     | ***************************************
[2025-11-27 19:21:55] 2025-11-28 00:21:21,399 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:21:55] 2025-11-28 00:21:21,399 | INFO     | ***************************************
[2025-11-27 19:21:55] 2025-11-28 00:21:21,399 | INFO     | 
[2025-11-27 19:21:55] 2025-11-28 00:21:21,412 | INFO     | architecture information:
[2025-11-27 19:21:55] 2025-11-28 00:21:21,441 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:21:55] 2025-11-28 00:21:21,497 | INFO     | cat /etc/os-release:
[2025-11-27 19:21:55] NAME="CentOS Linux"
[2025-11-27 19:21:55] VERSION="7 (Core)"
[2025-11-27 19:21:55] ID="centos"
[2025-11-27 19:21:55] ID_LIKE="rhel fedora"
[2025-11-27 19:21:55] VERSION_ID="7"
[2025-11-27 19:21:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:21:55] ANSI_COLOR="0;31"
[2025-11-27 19:21:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:21:55] HOME_URL="https://www.centos.org/"
[2025-11-27 19:21:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:21:55] 
[2025-11-27 19:21:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:21:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:21:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:21:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:21:55] 
[2025-11-27 19:21:55] 2025-11-28 00:21:21,497 | INFO     | ***************************************
[2025-11-27 19:21:55] 2025-11-28 00:21:22,003 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 19:21:55] 2025-11-28 00:21:22,114 | INFO     | sufficient remaining disk space (84617986048 B)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:21:55] 2025-11-28 00:21:22,114 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:21:55] 2025-11-28 00:21:22,114 | INFO     | update_server=False
[2025-11-27 19:21:55] 2025-11-28 00:21:22,114 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:21:55] 2025-11-28 00:21:22,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:22,407 | INFO     | all payload control threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:22,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:22,600 | INFO     | aborting loop
[2025-11-27 19:21:55] 2025-11-28 00:21:23,120 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,131 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,163 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,171 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,178 | INFO     | all data control threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:23,414 | INFO     | [payload] control thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,479 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:23,565 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,605 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,651 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:23,710 | INFO     | all job control threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:23,813 | INFO     | [job] validate thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:24,082 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:24,083 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:24,184 | INFO     | [data] control thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:24,410 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:24,723 | INFO     | [job] control thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:25,172 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:21:55] 2025-11-28 00:21:25,489 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:29,189 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:21:55] 2025-11-28 00:21:47,585 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:21:55] 2025-11-28 00:21:49,683 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809079494464)>', '<ExcThread(monitor, started 139808223520512)>']
[2025-11-27 19:21:55] 2025-11-28 00:21:51,038 | INFO     | 69456s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 19:21:55] 2025-11-28 00:21:53,621 | INFO     | PID=3078623 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:21:55] 2025-11-28 00:21:53,622 | INFO     | .. there are 75 such processes running
[2025-11-27 19:21:55] 2025-11-28 00:21:53,622 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:21:55] 2025-11-28 00:21:53,622 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:21:55] 2025-11-28 00:21:53,622 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:21:55] 2025-11-28 00:21:53,622 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:21:55] 2025-11-28 00:21:53,622 | INFO     | [monitor] control thread has ended
[2025-11-27 19:21:55] 2025-11-28 00:21:54,720 | INFO     | all workflow threads have been joined
[2025-11-27 19:21:55] 2025-11-28 00:21:54,721 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:21:55] 2025-11-28 00:21:54,721 | INFO     | traces error code: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:54,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:21:55] 2025-11-28 00:21:55,059 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:21:55] 2025-11-28 00:21:55,061 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:21:55] 2025-11-28 00:21:55,067 [wrapper] pilotpid: 3078623
[2025-11-27 19:21:55] 2025-11-28 00:21:55,082 [wrapper] Pilot exit status: 0
[2025-11-27 19:21:55] 2025-11-28 00:21:55,161 [wrapper] pandaids: 6897373283
[2025-11-27 19:21:55] 2025-11-28 00:21:55,363 [wrapper] cleanup supervisor_pilot 1541503 3078624
[2025-11-27 19:21:55] 2025-11-28 00:21:55,377 [wrapper] Test setup, not cleaning
[2025-11-27 19:21:55] 2025-11-28 00:21:55,384 [wrapper] apfmon messages muted
[2025-11-27 19:21:55] 2025-11-28 00:21:55,387 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:21:55] 2025-11-28 00:21:55,390 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:21:55]  *** Error codes and diagnostics ***
[2025-11-27 19:21:55]     "exeErrorCode": 0,
[2025-11-27 19:21:55]     "exeErrorDiag": "",
[2025-11-27 19:21:55]     "pilotErrorCode": 0,
[2025-11-27 19:21:55]     "pilotErrorDiag": "",
[2025-11-27 19:21:55]  *** Listing of results directory ***
[2025-11-27 19:21:55] total 1323012
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 19:21:55] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:21:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 19:21:55] -rw-r--r--. 2 boincer umatlas 409783123 Nov 27 00:03 EVNT.47483658._002215.pool.root.1
[2025-11-27 19:21:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 19:21:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 19:21:55] -rw-r--r--. 2 boincer umatlas    590114 Nov 27 00:03 input.tar.gz
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:03 pandaJob.out
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 19:21:55] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:06 boinc_task_state.xml
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 19:19 init_data.xml
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas 918322739 Nov 27 19:20 HITS.47556161._001990.pool.root.1
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas      1069 Nov 27 19:20 memory_monitor_summary.json
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:20 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas   2379177 Nov 27 19:20 log.47556161._001990.job.log.tgz.1
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas        95 Nov 27 19:21 pilot_heartbeat.json
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas      8631 Nov 27 19:21 heartbeat.json
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:21 boinc_mmap_file
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas      4940 Nov 27 19:21 pilotlog.txt
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:21 wrapper_checkpoint.txt
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas   8991992 Nov 27 19:21 log.47556161._001990.job.log.1
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas       353 Nov 27 19:21 output.list
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:21 runtime_log
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas  11386880 Nov 27 19:21 result.tar.gz
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:21 runtime_log.err
[2025-11-27 19:21:55] -rw-------. 1 boincer umatlas       665 Nov 27 19:21 JJEODm6WBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm9ZJKDmgg04zn.diag
[2025-11-27 19:21:55] -rw-r--r--. 1 boincer umatlas     21438 Nov 27 19:21 stderr.txt
[2025-11-27 19:21:56] HITS file was successfully produced:
[2025-11-27 19:21:56] -rw-------. 1 boincer umatlas 918322739 Nov 27 19:20 shared/HITS.pool.root.1
[2025-11-27 19:21:56]  *** Contents of shared directory: ***
[2025-11-27 19:21:56] total 1308704
[2025-11-27 19:21:56] -rw-r--r--. 2 boincer umatlas 409783123 Nov 27 00:03 ATLAS.root_0
[2025-11-27 19:21:56] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 19:21:56] -rw-r--r--. 2 boincer umatlas    590114 Nov 27 00:03 input.tar.gz
[2025-11-27 19:21:56] -rw-------. 1 boincer umatlas 918322739 Nov 27 19:20 HITS.pool.root.1
[2025-11-27 19:21:56] -rw-------. 1 boincer umatlas  11386880 Nov 27 19:21 result.tar.gz
19:21:57 (3070825): run_atlas exited; CPU time 199528.733232
19:21:57 (3070825): called boinc_finish(0)

</stderr_txt>
]]>

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