Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:40:54 (796866): wrapper (7.7.26015): starting
05:40:54 (796866): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 05:40:54] Arguments: --nthreads 8
[2025-11-27 05:40:54] Threads: 8
[2025-11-27 05:40:54] Checking for CVMFS
[2025-11-27 05:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 05:40:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 05:40:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 05:40:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 05:40:54] 2.13.3.0 12500 31383 249940 153360 1 667 25862334 32503809 53197 16776704 0 213468876 99.529 248685962 37148 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 05:40:54] CVMFS is ok
[2025-11-27 05:40:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 05:40:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 05:40:54] Further information can be found at the LHC@home message board.
[2025-11-27 05:40:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 05:40:54] Checking for apptainer binary...
[2025-11-27 05:40:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 05:40:54] Running /usr/bin/apptainer --version
[2025-11-27 05:40:54] apptainer version 1.4.4-1.el9
[2025-11-27 05:40:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 05:40:55] c7-7-36.aglt2.org
[2025-11-27 05:40:55] apptainer works
[2025-11-27 05:40:55] Set ATHENA_PROC_NUMBER=8
[2025-11-27 05:40:55] Set ATHENA_CORE_NUMBER=8
[2025-11-27 05:40:55] Starting ATLAS job with PandaID=6897488202
[2025-11-27 05:40:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:31:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:31:48] 2025-11-28 01:30:37,160 | INFO     | executing command: lscpu
[2025-11-27 20:31:48] 2025-11-28 01:30:37,224 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 20:31:48] 2025-11-28 01:30:38,495 | INFO     | time since job start (53369s) is within the limit (172800.0s)
[2025-11-27 20:31:48] 2025-11-28 01:30:39,511 | INFO     | monitor loop #3273: job 0:6897488202 is in state 'finished'
[2025-11-27 20:31:48] 2025-11-28 01:30:39,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:31:48] 2025-11-28 01:30:40,501 | INFO     | time since job start (53371s) is within the limit (172800.0s)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,014 | INFO     | monitor loop #3274: job 0:6897488202 is in state 'finished'
[2025-11-27 20:31:48] 2025-11-28 01:30:42,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,383 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:31:48] 2025-11-28 01:30:42,387 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3230.735395833333
[2025-11-27 20:31:48] 2025-11-28 01:30:42,399 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6897488202/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,399 | INFO     | extracted standard info from prmon json
[2025-11-27 20:31:48] 2025-11-28 01:30:42,400 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:31:48] 2025-11-28 01:30:42,400 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:31:48] 2025-11-28 01:30:42,408 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:31:48] 2025-11-28 01:30:42,410 | INFO     | sum of square deviations: 207737263886.47528
[2025-11-27 20:31:48] 2025-11-28 01:30:42,422 | INFO     | sum of deviations: 1287751109327.8933
[2025-11-27 20:31:48] 2025-11-28 01:30:42,422 | INFO     | mean x: 1764266761.0537143
[2025-11-27 20:31:48] 2025-11-28 01:30:42,422 | INFO     | mean y: 5022654.002285714
[2025-11-27 20:31:48] 2025-11-28 01:30:42,422 | INFO     | intersect: -10931563474.99777
[2025-11-27 20:31:48] 2025-11-28 01:30:42,423 | INFO     | chi2: 12.966769671133267
[2025-11-27 20:31:48] 2025-11-28 01:30:42,424 | INFO     | sum of square deviations: 204196743818.39197
[2025-11-27 20:31:48] 2025-11-28 01:30:42,433 | INFO     | sum of deviations: 1843162240936.5942
[2025-11-27 20:31:48] 2025-11-28 01:30:42,434 | INFO     | mean x: 1764266608.55977
[2025-11-27 20:31:48] 2025-11-28 01:30:42,434 | INFO     | mean y: 5046567.777011494
[2025-11-27 20:31:48] 2025-11-28 01:30:42,434 | INFO     | intersect: -15919936049.647758
[2025-11-27 20:31:48] 2025-11-28 01:30:42,434 | INFO     | chi2: 9.452618150347169
[2025-11-27 20:31:48] 2025-11-28 01:30:42,434 | INFO     | current chi2=9.452618150347169 (change=27.101210323873744 %)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,435 | INFO     | sum of square deviations: 200696531026.62915
[2025-11-27 20:31:48] 2025-11-28 01:30:42,445 | INFO     | sum of deviations: 1968930494895.9563
[2025-11-27 20:31:48] 2025-11-28 01:30:42,445 | INFO     | mean x: 1764266456.0624278
[2025-11-27 20:31:48] 2025-11-28 01:30:42,446 | INFO     | mean y: 5052031.371098266
[2025-11-27 20:31:48] 2025-11-28 01:30:42,446 | INFO     | intersect: -17303259221.913223
[2025-11-27 20:31:48] 2025-11-28 01:30:42,446 | INFO     | chi2: 9.093169932084386
[2025-11-27 20:31:48] 2025-11-28 01:30:42,446 | INFO     | current chi2=9.093169932084386 (change=3.802631319129092 %)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,446 | INFO     | right removable region: 864
[2025-11-27 20:31:48] 2025-11-28 01:30:42,447 | INFO     | sum of square deviations: 204196287784.6268
[2025-11-27 20:31:48] 2025-11-28 01:30:42,459 | INFO     | sum of deviations: 792234692812.2968
[2025-11-27 20:31:48] 2025-11-28 01:30:42,459 | INFO     | mean x: 1764266913.5574713
[2025-11-27 20:31:48] 2025-11-28 01:30:42,459 | INFO     | mean y: 5043976.354022988
[2025-11-27 20:31:48] 2025-11-28 01:30:42,459 | INFO     | intersect: -6839906396.961877
[2025-11-27 20:31:48] 2025-11-28 01:30:42,460 | INFO     | chi2: 9.898550220976862
[2025-11-27 20:31:48] 2025-11-28 01:30:42,460 | INFO     | current chi2=9.898550220976862 (change=23.662172830808444 %)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,460 | INFO     | left removable region: 10
[2025-11-27 20:31:48] 2025-11-28 01:30:42,461 | INFO     | sum of square deviations: 193136792877.42404
[2025-11-27 20:31:48] 2025-11-28 01:30:42,473 | INFO     | sum of deviations: 1149555451659.876
[2025-11-27 20:31:48] 2025-11-28 01:30:42,473 | INFO     | mean x: 1764266730.5690866
[2025-11-27 20:31:48] 2025-11-28 01:30:42,474 | INFO     | mean y: 5088153.510538641
[2025-11-27 20:31:48] 2025-11-28 01:30:42,474 | INFO     | intersect: -10495875480.047386
[2025-11-27 20:31:48] 2025-11-28 01:30:42,474 | INFO     | chi2: 4.780573863959896
[2025-11-27 20:31:48] 2025-11-28 01:30:42,474 | INFO     | current memory leak: 5.95 B/s (using 854 data points, chi2=4.78)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,475 | INFO     | could have reported an average CPU frequency of 3218 MHz (33 samples)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,475 | INFO     | ..............................
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . Timing measurements:
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . get job = 0 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . initial setup = 2 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . payload setup = 9 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . stage-in = 0 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . payload execution = 53329 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . stage-out = 3 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | . log creation = 0 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,476 | INFO     | ..............................
[2025-11-27 20:31:48] 2025-11-28 01:30:42,512 | INFO     | time since job start (53373s) is within the limit (172800.0s)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,518 | INFO     | 
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | job summary report
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | --------------------------------------------------
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | PanDA job id: 6897488202
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | task id: 47556161
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | errors: (none)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | pilot state: finished 
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | transexitcode: 0
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | exeerrorcode: 0
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | exeerrordiag: 
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | exitcode: 0
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | exitmsg: OK
[2025-11-27 20:31:48] 2025-11-28 01:30:42,519 | INFO     | cpuconsumptiontime: 193502 s
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | nevents: 1000
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | neventsw: 0
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | pid: 807500
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | pgrp: 807500
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | corecount: 8
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | event service: False
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | sizes: {0: 2284265, 7: 2284527, 11: 2284555, 53342: 2333069, 53347: 2342063, 53348: 2342119, 53355: 2342557}
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | --------------------------------------------------
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | 
[2025-11-27 20:31:48] 2025-11-28 01:30:42,520 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 20:31:48] 2025-11-28 01:30:42,539 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:31:48] 2025-11-28 01:30:42,541 | INFO     | job 6897488202 has completed (purged errors)
[2025-11-27 20:31:48] 2025-11-28 01:30:42,542 | INFO     | overall cleanup function is called
[2025-11-27 20:31:48] 2025-11-28 01:30:43,558 | INFO     | --- collectZombieJob: --- 10, [807500]
[2025-11-27 20:31:48] 2025-11-28 01:30:43,559 | INFO     | zombie collector waiting for pid 807500
[2025-11-27 20:31:48] 2025-11-28 01:30:43,559 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:31:48] 2025-11-28 01:30:43,559 | INFO     | collected zombie processes
[2025-11-27 20:31:48] 2025-11-28 01:30:43,559 | INFO     | will attempt to kill all subprocesses of pid=807500
[2025-11-27 20:31:48] 2025-11-28 01:30:44,237 | INFO     | process IDs to be killed: [807500] (in reverse order)
[2025-11-27 20:31:48] 2025-11-28 01:30:44,467 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:31:48] 2025-11-28 01:30:44,467 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:31:48] 2025-11-28 01:30:44,498 | INFO     | did not find any defunct processes belonging to 807500
[2025-11-27 20:31:48] 2025-11-28 01:30:44,530 | INFO     | did not find any defunct processes belonging to 807500
[2025-11-27 20:31:48] 2025-11-28 01:30:44,531 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:31:48] 2025-11-28 01:30:44,531 | INFO     | ready for new job
[2025-11-27 20:31:48] 2025-11-28 01:30:44,532 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:31:48] 2025-11-28 01:30:44,535 | INFO     | ***************************************
[2025-11-27 20:31:48] 2025-11-28 01:30:44,536 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:31:48] 2025-11-28 01:30:44,536 | INFO     | ***************************************
[2025-11-27 20:31:48] 2025-11-28 01:30:44,536 | INFO     | 
[2025-11-27 20:31:48] 2025-11-28 01:30:44,541 | INFO     | architecture information:
[2025-11-27 20:31:48] 2025-11-28 01:30:44,542 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:31:48] 2025-11-28 01:30:44,562 | INFO     | cat /etc/os-release:
[2025-11-27 20:31:48] NAME="CentOS Linux"
[2025-11-27 20:31:48] VERSION="7 (Core)"
[2025-11-27 20:31:48] ID="centos"
[2025-11-27 20:31:48] ID_LIKE="rhel fedora"
[2025-11-27 20:31:48] VERSION_ID="7"
[2025-11-27 20:31:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:31:48] ANSI_COLOR="0;31"
[2025-11-27 20:31:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:31:48] HOME_URL="https://www.centos.org/"
[2025-11-27 20:31:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:31:48] 
[2025-11-27 20:31:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:31:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:31:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:31:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:31:48] 
[2025-11-27 20:31:48] 2025-11-28 01:30:44,563 | INFO     | ***************************************
[2025-11-27 20:31:48] 2025-11-28 01:30:45,066 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 20:31:48] 2025-11-28 01:30:45,089 | INFO     | sufficient remaining disk space (87812997120 B)
[2025-11-27 20:31:48] 2025-11-28 01:30:45,089 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:31:48] 2025-11-28 01:30:45,089 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:31:48] 2025-11-28 01:30:45,089 | INFO     | update_server=False
[2025-11-27 20:31:48] 2025-11-28 01:30:45,089 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:31:48] 2025-11-28 01:30:45,089 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:31:48] 2025-11-28 01:30:45,466 | INFO     | all data control threads have been joined
[2025-11-27 20:31:48] 2025-11-28 01:30:45,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:31:48] 2025-11-28 01:30:45,526 | INFO     | aborting loop
[2025-11-27 20:31:48] 2025-11-28 01:30:45,766 | INFO     | all payload control threads have been joined
[2025-11-27 20:31:48] 2025-11-28 01:30:45,776 | INFO     | all job control threads have been joined
[2025-11-27 20:31:48] 2025-11-28 01:30:45,842 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:31:48] 2025-11-28 01:30:46,095 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,220 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,353 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,359 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,371 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,472 | INFO     | [data] control thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,530 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,686 | INFO     | [job] validate thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,690 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,772 | INFO     | [payload] control thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:46,781 | INFO     | [job] control thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:47,096 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:47,243 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:47,535 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:31:48] 2025-11-28 01:30:48,541 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:49,848 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:30:55,435 | INFO     | job.realtimelogging is not enabled
[2025-11-27 20:31:48] 2025-11-28 01:30:56,440 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:31:48] 2025-11-28 01:31:16,489 | INFO     | PID=800542 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 20:31:48] 2025-11-28 01:31:16,489 | INFO     | .. there are 74 such processes running
[2025-11-27 20:31:48] 2025-11-28 01:31:16,490 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:31:48] 2025-11-28 01:31:16,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:31:48] 2025-11-28 01:31:16,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:31:48] 2025-11-28 01:31:41,611 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:31:48] 2025-11-28 01:31:42,612 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690681984832)>', '<ExcThread(monitor, started 140689941706496)>']
[2025-11-27 20:31:48] 2025-11-28 01:31:42,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:31:48] 2025-11-28 01:31:42,644 | INFO     | [monitor] control thread has ended
[2025-11-27 20:31:48] 2025-11-28 01:31:47,637 | INFO     | all workflow threads have been joined
[2025-11-27 20:31:48] 2025-11-28 01:31:47,638 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:31:48] 2025-11-28 01:31:47,638 | INFO     | traces error code: 0
[2025-11-27 20:31:48] 2025-11-28 01:31:47,639 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:31:48] 2025-11-28 01:31:47,896 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:31:48] 2025-11-28 01:31:47,922 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:31:48] 2025-11-28 01:31:47,946 [wrapper] pilotpid: 800542
[2025-11-27 20:31:48] 2025-11-28 01:31:47,969 [wrapper] Pilot exit status: 0
[2025-11-27 20:31:48] 2025-11-28 01:31:48,059 [wrapper] pandaids: 6897488202
[2025-11-27 20:31:48] 2025-11-28 01:31:48,253 [wrapper] cleanup supervisor_pilot 1937457 800543
[2025-11-27 20:31:48] 2025-11-28 01:31:48,257 [wrapper] Test setup, not cleaning
[2025-11-27 20:31:48] 2025-11-28 01:31:48,259 [wrapper] apfmon messages muted
[2025-11-27 20:31:48] 2025-11-28 01:31:48,261 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:31:48] 2025-11-28 01:31:48,264 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:31:48]  *** Error codes and diagnostics ***
[2025-11-27 20:31:48]     "exeErrorCode": 0,
[2025-11-27 20:31:48]     "exeErrorDiag": "",
[2025-11-27 20:31:48]     "pilotErrorCode": 0,
[2025-11-27 20:31:48]     "pilotErrorDiag": "",
[2025-11-27 20:31:48]  *** Listing of results directory ***
[2025-11-27 20:31:48] total 1310228
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 20:31:48] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas       100 Nov 27 05:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:31:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 05:40 run_atlas
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas       105 Nov 27 05:40 job.xml
[2025-11-27 20:31:48] -rw-r--r--. 2 boincer umatlas 408816569 Nov 27 05:40 EVNT.47483658._002263.pool.root.1
[2025-11-27 20:31:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:40 start_atlas.sh
[2025-11-27 20:31:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 05:40 shared
[2025-11-27 20:31:48] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 05:40 input.tar.gz
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas         0 Nov 27 05:40 boinc_lockfile
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 05:40 pandaJob.out
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas        57 Nov 27 05:40 setup.sh.local
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas    991564 Nov 27 05:41 agis_schedconf.cvmfs.json
[2025-11-27 20:31:48] drwx------. 5 boincer umatlas      4096 Nov 27 05:41 pilot3
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas       533 Nov 27 20:22 boinc_task_state.xml
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 20:27 init_data.xml
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas 911166333 Nov 27 20:29 HITS.47556161._002463.pool.root.1
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas      1076 Nov 27 20:30 memory_monitor_summary.json
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas   2059489 Nov 27 20:30 log.47556161._002463.job.log.tgz.1
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas      7950 Nov 27 20:30 heartbeat.json
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas        95 Nov 27 20:31 pilot_heartbeat.json
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:31 boinc_mmap_file
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:31 wrapper_checkpoint.txt
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas      4895 Nov 27 20:31 pilotlog.txt
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas   6827129 Nov 27 20:31 log.47556161._002463.job.log.1
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas       353 Nov 27 20:31 output.list
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:31 runtime_log
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas   8908800 Nov 27 20:31 result.tar.gz
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 20:31 runtime_log.err
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas       665 Nov 27 20:31 iHYMDmMXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmhXMKDmI4NMWm.diag
[2025-11-27 20:31:48] -rw-r--r--. 1 boincer umatlas     21552 Nov 27 20:31 stderr.txt
[2025-11-27 20:31:48] HITS file was successfully produced:
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas 911166333 Nov 27 20:29 shared/HITS.pool.root.1
[2025-11-27 20:31:48]  *** Contents of shared directory: ***
[2025-11-27 20:31:48] total 1298352
[2025-11-27 20:31:48] -rw-r--r--. 2 boincer umatlas 408816569 Nov 27 05:40 ATLAS.root_0
[2025-11-27 20:31:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 05:40 start_atlas.sh
[2025-11-27 20:31:48] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 05:40 input.tar.gz
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas 911166333 Nov 27 20:29 HITS.pool.root.1
[2025-11-27 20:31:48] -rw-------. 1 boincer umatlas   8908800 Nov 27 20:31 result.tar.gz
20:31:49 (796866): run_atlas exited; CPU time 194947.886215
20:31:49 (796866): called boinc_finish(0)

</stderr_txt>
]]>

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