Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:37 (3831431): wrapper (7.7.26015): starting
00:05:37 (3831431): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:05:37] Arguments: --nthreads 8
[2025-11-27 00:05:37] Threads: 8
[2025-11-27 00:05:37] Checking for CVMFS
[2025-11-27 00:05:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:05:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:05:38] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:05:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:05:40] 2.13.3.0 22787 30997 262568 153347 0 911 35541634 40960001 68120 16776704 0 450485386 99.749 274509506 47814 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:05:40] CVMFS is ok
[2025-11-27 00:05:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:05:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:05:40] Further information can be found at the LHC@home message board.
[2025-11-27 00:05:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:05:40] Checking for apptainer binary...
[2025-11-27 00:05:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:05:40] Running /usr/bin/apptainer --version
[2025-11-27 00:05:40] apptainer version 1.4.4-1.el9
[2025-11-27 00:05:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:05:41] c8-6-11.aglt2.org
[2025-11-27 00:05:41] apptainer works
[2025-11-27 00:05:41] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:05:41] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:05:41] Starting ATLAS job with PandaID=6898177041
[2025-11-27 00:05:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:09:55]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:09:55] 2025-11-27 16:08:45,251 | INFO     | time since job start (39632s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:47,086 | INFO     | monitor loop #2235: job 0:6898177041 is in state 'finished'
[2025-11-27 11:09:55] 2025-11-27 16:08:47,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:09:55] 2025-11-27 16:08:47,258 | INFO     | time since job start (39634s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:49,270 | INFO     | time since job start (39636s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:49,595 | INFO     | monitor loop #2236: job 0:6898177041 is in state 'finished'
[2025-11-27 11:09:55] 2025-11-27 16:08:49,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:09:55] 2025-11-27 16:08:51,276 | INFO     | time since job start (39638s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:52,104 | INFO     | monitor loop #2237: job 0:6898177041 is in state 'finished'
[2025-11-27 11:09:55] 2025-11-27 16:08:52,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:09:55] 2025-11-27 16:08:53,283 | INFO     | time since job start (39640s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:54,607 | INFO     | monitor loop #2238: job 0:6898177041 is in state 'finished'
[2025-11-27 11:09:55] 2025-11-27 16:08:54,607 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:09:55] 2025-11-27 16:08:55,290 | INFO     | time since job start (39642s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,113 | INFO     | monitor loop #2239: job 0:6898177041 is in state 'finished'
[2025-11-27 11:09:55] 2025-11-27 16:08:57,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,299 | INFO     | time since job start (39644s) is within the limit (172800.0s)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,431 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 11:09:55] 2025-11-27 16:08:57,440 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1175390624994
[2025-11-27 11:09:55] 2025-11-27 16:08:57,465 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6898177041/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,465 | INFO     | extracted standard info from prmon json
[2025-11-27 11:09:55] 2025-11-27 16:08:57,466 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 11:09:55] 2025-11-27 16:08:57,466 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 11:09:55] 2025-11-27 16:08:57,487 | INFO     | fitting pss+swap vs Time
[2025-11-27 11:09:55] 2025-11-27 16:08:57,487 | INFO     | sum of square deviations: 83210445558.65141
[2025-11-27 11:09:55] 2025-11-27 16:08:57,494 | INFO     | sum of deviations: 380705514078.3946
[2025-11-27 11:09:55] 2025-11-27 16:08:57,494 | INFO     | mean x: 1764240008.9767442
[2025-11-27 11:09:55] 2025-11-27 16:08:57,494 | INFO     | mean y: 2744147.1596899224
[2025-11-27 11:09:55] 2025-11-27 16:08:57,495 | INFO     | intersect: -8069029715.675138
[2025-11-27 11:09:55] 2025-11-27 16:08:57,500 | INFO     | chi2: 29.61694575787026
[2025-11-27 11:09:55] 2025-11-27 16:08:57,500 | INFO     | sum of square deviations: 81290564493.84375
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | sum of deviations: 593552992888.0312
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | mean x: 1764239856.484375
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | mean y: 2761060.203125
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | intersect: -12879051896.920025
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | chi2: 25.828820442152953
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | current chi2=25.828820442152953 (change=12.790398262827853 %)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,506 | INFO     | right removable region: 639
[2025-11-27 11:09:55] 2025-11-27 16:08:57,507 | INFO     | sum of square deviations: 81290180193.84375
[2025-11-27 11:09:55] 2025-11-27 16:08:57,514 | INFO     | sum of deviations: 124435801928.56168
[2025-11-27 11:09:55] 2025-11-27 16:08:57,514 | INFO     | mean x: 1764240161.484375
[2025-11-27 11:09:55] 2025-11-27 16:08:57,514 | INFO     | mean y: 2764497.25625
[2025-11-27 11:09:55] 2025-11-27 16:08:57,514 | INFO     | intersect: -2697864764.056534
[2025-11-27 11:09:55] 2025-11-27 16:08:57,514 | INFO     | chi2: 25.117339191806924
[2025-11-27 11:09:55] 2025-11-27 16:08:57,514 | INFO     | current chi2=25.117339191806924 (change=15.192675851349838 %)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,515 | INFO     | left removable region: 10
[2025-11-27 11:09:55] 2025-11-27 16:08:57,515 | INFO     | sum of square deviations: 77170513462.99869
[2025-11-27 11:09:55] 2025-11-27 16:08:57,520 | INFO     | sum of deviations: 164334591622.7504
[2025-11-27 11:09:55] 2025-11-27 16:08:57,520 | INFO     | mean x: 1764240131.0015898
[2025-11-27 11:09:55] 2025-11-27 16:08:57,520 | INFO     | mean y: 2804362.2496025437
[2025-11-27 11:09:55] 2025-11-27 16:08:57,520 | INFO     | intersect: -3754144612.7190037
[2025-11-27 11:09:55] 2025-11-27 16:08:57,521 | INFO     | chi2: 16.86283209138796
[2025-11-27 11:09:55] 2025-11-27 16:08:57,521 | INFO     | current memory leak: 2.13 B/s (using 629 data points, chi2=16.86)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,521 | INFO     | could have reported an average CPU frequency of 3797 MHz (25 samples)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,521 | INFO     | ..............................
[2025-11-27 11:09:55] 2025-11-27 16:08:57,521 | INFO     | . Timing measurements:
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . get job = 0 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . initial setup = 8 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . payload setup = 73 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . stage-in = 0 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . payload execution = 39387 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . stage-out = 5 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | . log creation = 1 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,522 | INFO     | ..............................
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | 
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | job summary report
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | --------------------------------------------------
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | PanDA job id: 6898177041
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | task id: 47556161
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | errors: (none)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | pilot state: finished 
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | transexitcode: 0
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | exeerrorcode: 0
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | exeerrordiag: 
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | exitcode: 0
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | exitmsg: OK
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | cpuconsumptiontime: 137477 s
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | nevents: 1000
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | neventsw: 0
[2025-11-27 11:09:55] 2025-11-27 16:08:57,629 | INFO     | pid: 4005615
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | pgrp: 4005615
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | corecount: 8
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | event service: False
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284321, 33: 2284349, 44: 2284405, 55: 2284561, 65: 2284589, 68: 2284879, 76: 2284907, 39464: 2327970, 39470: 2336
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | --------------------------------------------------
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | 
[2025-11-27 11:09:55] 2025-11-27 16:08:57,630 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2025-11-27 11:09:55] 2025-11-27 16:08:57,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 11:09:55] 2025-11-27 16:08:57,828 | INFO     | job 6898177041 has completed (purged errors)
[2025-11-27 11:09:55] 2025-11-27 16:08:57,829 | INFO     | overall cleanup function is called
[2025-11-27 11:09:55] 2025-11-27 16:08:58,853 | INFO     | --- collectZombieJob: --- 10, [4005615]
[2025-11-27 11:09:55] 2025-11-27 16:08:58,854 | INFO     | zombie collector waiting for pid 4005615
[2025-11-27 11:09:55] 2025-11-27 16:08:58,854 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 11:09:55] 2025-11-27 16:08:58,854 | INFO     | collected zombie processes
[2025-11-27 11:09:55] 2025-11-27 16:08:58,854 | INFO     | will attempt to kill all subprocesses of pid=4005615
[2025-11-27 11:09:55] 2025-11-27 16:08:59,901 | INFO     | process IDs to be killed: [4005615] (in reverse order)
[2025-11-27 11:09:55] 2025-11-27 16:09:00,241 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 11:09:55] 2025-11-27 16:09:00,241 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 11:09:55] 2025-11-27 16:09:00,297 | INFO     | did not find any defunct processes belonging to 4005615
[2025-11-27 11:09:55] 2025-11-27 16:09:00,357 | INFO     | did not find any defunct processes belonging to 4005615
[2025-11-27 11:09:55] 2025-11-27 16:09:00,358 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 11:09:55] 2025-11-27 16:09:00,358 | INFO     | ready for new job
[2025-11-27 11:09:55] 2025-11-27 16:09:00,358 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 11:09:55] 2025-11-27 16:09:00,361 | INFO     | ***************************************
[2025-11-27 11:09:55] 2025-11-27 16:09:00,361 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 11:09:55] 2025-11-27 16:09:00,361 | INFO     | ***************************************
[2025-11-27 11:09:55] 2025-11-27 16:09:00,361 | INFO     | 
[2025-11-27 11:09:55] 2025-11-27 16:09:00,365 | INFO     | architecture information:
[2025-11-27 11:09:55] 2025-11-27 16:09:00,365 | INFO     | executing command: cat /etc/os-release
[2025-11-27 11:09:55] 2025-11-27 16:09:00,423 | INFO     | cat /etc/os-release:
[2025-11-27 11:09:55] NAME="CentOS Linux"
[2025-11-27 11:09:55] VERSION="7 (Core)"
[2025-11-27 11:09:55] ID="centos"
[2025-11-27 11:09:55] ID_LIKE="rhel fedora"
[2025-11-27 11:09:55] VERSION_ID="7"
[2025-11-27 11:09:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 11:09:55] ANSI_COLOR="0;31"
[2025-11-27 11:09:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 11:09:55] HOME_URL="https://www.centos.org/"
[2025-11-27 11:09:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:09:55] 
[2025-11-27 11:09:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:09:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:09:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:09:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:09:55] 
[2025-11-27 11:09:55] 2025-11-27 16:09:00,423 | INFO     | ***************************************
[2025-11-27 11:09:55] 2025-11-27 16:09:00,929 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2025-11-27 11:09:55] 2025-11-27 16:09:01,000 | INFO     | sufficient remaining disk space (158134697984 B)
[2025-11-27 11:09:55] 2025-11-27 16:09:01,000 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:09:55] 2025-11-27 16:09:01,000 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:09:55] 2025-11-27 16:09:01,001 | INFO     | update_server=False
[2025-11-27 11:09:55] 2025-11-27 16:09:01,001 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:09:55] 2025-11-27 16:09:01,001 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:09:55] 2025-11-27 16:09:01,001 | INFO     | aborting loop
[2025-11-27 11:09:55] 2025-11-27 16:09:01,399 | INFO     | all job control threads have been joined
[2025-11-27 11:09:55] 2025-11-27 16:09:01,644 | INFO     | all payload control threads have been joined
[2025-11-27 11:09:55] 2025-11-27 16:09:01,740 | INFO     | all data control threads have been joined
[2025-11-27 11:09:55] 2025-11-27 16:09:02,007 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,007 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,090 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:09:55] 2025-11-27 16:09:02,185 | INFO     | [job] validate thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,205 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,404 | INFO     | [job] control thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,588 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:09:55] 2025-11-27 16:09:02,637 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,637 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,651 | INFO     | [payload] control thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,736 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,750 | INFO     | [data] control thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,782 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,813 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:02,831 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:03,594 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:03,666 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:09:55] 2025-11-27 16:09:04,103 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:07,680 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:09:55] 2025-11-27 16:09:22,831 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:09:55] 2025-11-27 16:09:24,840 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173725951808)>', '<ExcThread(monitor, started 140173069235968)>']
[2025-11-27 11:09:55] 2025-11-27 16:09:29,866 | INFO     | all workflow threads have been joined
[2025-11-27 11:09:55] 2025-11-27 16:09:29,866 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:09:55] 2025-11-27 16:09:29,866 | INFO     | traces error code: 0
[2025-11-27 11:09:55] 2025-11-27 16:09:29,866 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:09:55] 2025-11-27 16:09:31,190 | INFO     | PID=3893366 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:09:55] 2025-11-27 16:09:31,190 | INFO     | .. there are 88 such processes running
[2025-11-27 11:09:55] 2025-11-27 16:09:31,191 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:09:55] 2025-11-27 16:09:31,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:09:55] 2025-11-27 16:09:31,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:09:55] 2025-11-27 16:09:31,191 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:09:55] 2025-11-27 16:09:31,191 | INFO     | [monitor] control thread has ended
[2025-11-27 11:09:55] 2025-11-27 16:09:31,323 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:09:55] 2025-11-27 16:09:31,351 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:09:55] 2025-11-27 16:09:31,386 [wrapper] pilotpid: 3893366
[2025-11-27 11:09:55] 2025-11-27 16:09:31,406 [wrapper] Pilot exit status: 0
[2025-11-27 11:09:55] 2025-11-27 16:09:31,566 [wrapper] pandaids: 6898177041
[2025-11-27 11:09:55] 2025-11-27 16:09:31,946 [wrapper] cleanup supervisor_pilot  744821 3893367
[2025-11-27 11:09:55] 2025-11-27 16:09:32,004 [wrapper] Test setup, not cleaning
[2025-11-27 11:09:55] 2025-11-27 16:09:32,055 [wrapper] apfmon messages muted
[2025-11-27 11:09:55] 2025-11-27 16:09:32,070 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:09:55] 2025-11-27 16:09:32,166 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:09:55]  *** Error codes and diagnostics ***
[2025-11-27 11:09:55]     "exeErrorCode": 0,
[2025-11-27 11:09:55]     "exeErrorDiag": "",
[2025-11-27 11:09:55]     "pilotErrorCode": 0,
[2025-11-27 11:09:55]     "pilotErrorDiag": "",
[2025-11-27 11:09:55]  *** Listing of results directory ***
[2025-11-27 11:09:55] total 1315576
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:06 queuedata.json
[2025-11-27 11:09:55] -rwx------. 1 boincer umatlas     36292 Nov 25 23:06 runpilot2-wrapper.sh
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:09:55] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:05 run_atlas
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:05 job.xml
[2025-11-27 11:09:55] -rw-r--r--. 2 boincer umatlas 410146112 Nov 27 00:05 EVNT.47483658._002467.pool.root.1
[2025-11-27 11:09:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 11:09:55] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:05 shared
[2025-11-27 11:09:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:05 input.tar.gz
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:05 boinc_lockfile
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:05 pandaJob.out
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas        57 Nov 27 00:05 setup.sh.local
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas    991570 Nov 27 00:08 agis_schedconf.cvmfs.json
[2025-11-27 11:09:55] drwx------. 5 boincer umatlas      4096 Nov 27 00:08 pilot3
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas       533 Nov 27 10:41 boinc_task_state.xml
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 11:03 init_data.xml
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas 919740485 Nov 27 11:07 HITS.47556161._004493.pool.root.1
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas      1065 Nov 27 11:08 memory_monitor_summary.json
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas   1516240 Nov 27 11:08 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas   1848760 Nov 27 11:08 log.47556161._004493.job.log.tgz.1
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas      8626 Nov 27 11:08 heartbeat.json
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas       823 Nov 27 11:09 pilotlog.txt
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas        95 Nov 27 11:09 pilot_heartbeat.json
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas   4821130 Nov 27 11:09 log.47556161._004493.job.log.1
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas       353 Nov 27 11:09 output.list
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas       620 Nov 27 11:09 runtime_log
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas   6686720 Nov 27 11:09 result.tar.gz
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas      9356 Nov 27 11:09 runtime_log.err
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas       664 Nov 27 11:09 MGdKDmuyLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmuMKDmRzOcXo.diag
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas        29 Nov 27 11:09 wrapper_checkpoint.txt
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 11:09 boinc_mmap_file
[2025-11-27 11:09:55] -rw-r--r--. 1 boincer umatlas     21814 Nov 27 11:09 stderr.txt
[2025-11-27 11:09:55] HITS file was successfully produced:
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas 919740485 Nov 27 11:07 shared/HITS.pool.root.1
[2025-11-27 11:09:55]  *** Contents of shared directory: ***
[2025-11-27 11:09:55] total 1305860
[2025-11-27 11:09:55] -rw-r--r--. 2 boincer umatlas 410146112 Nov 27 00:05 ATLAS.root_0
[2025-11-27 11:09:55] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 11:09:55] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:05 input.tar.gz
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas 919740485 Nov 27 11:07 HITS.pool.root.1
[2025-11-27 11:09:55] -rw-------. 1 boincer umatlas   6686720 Nov 27 11:09 result.tar.gz
11:09:57 (3831431): run_atlas exited; CPU time 138200.350816
11:09:57 (3831431): called boinc_finish(0)

</stderr_txt>
]]>

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