Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:38 (4016287): wrapper (7.7.26015): starting
00:04:38 (4016287): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:04:38] Arguments: --nthreads 9
[2025-11-27 00:04:38] Threads: 9
[2025-11-27 00:04:38] Checking for CVMFS
[2025-11-27 00:04:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:04:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:04:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:04:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:04:40] 2.13.3.0 12601 31047 378392 153347 2 558 16740572 32935936 45127 16776704 0 152570979 99.504 188024106 33698 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:04:40] CVMFS is ok
[2025-11-27 00:04:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:04:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:04:40] Further information can be found at the LHC@home message board.
[2025-11-27 00:04:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:04:40] Checking for apptainer binary...
[2025-11-27 00:04:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:04:40] Running /usr/bin/apptainer --version
[2025-11-27 00:04:41] apptainer version 1.4.4-1.el9
[2025-11-27 00:04:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:04:41] c6-12-27-4.aglt2.org
[2025-11-27 00:04:41] apptainer works
[2025-11-27 00:04:41] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:04:41] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:04:41] Starting ATLAS job with PandaID=6898177887
[2025-11-27 00:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:20:37]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:20:37] 2025-11-27 21:17:44,252 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:20:37] 2025-11-27 21:17:44,252 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:20:37] 2025-11-27 21:17:44,317 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:20:37] 2025-11-27 21:17:44,327 | INFO     | sum of square deviations: 268395413365.74918
[2025-11-27 16:20:37] 2025-11-27 21:17:44,351 | INFO     | sum of deviations: 2728172777169.8564
[2025-11-27 16:20:37] 2025-11-27 21:17:44,351 | INFO     | mean x: 1764249164.2318993
[2025-11-27 16:20:37] 2025-11-27 21:17:44,351 | INFO     | mean y: 2981920.3399790134
[2025-11-27 16:20:37] 2025-11-27 21:17:44,351 | INFO     | intersect: -17930173052.9274
[2025-11-27 16:20:37] 2025-11-27 21:17:44,353 | INFO     | chi2: 12.755815260091692
[2025-11-27 16:20:37] 2025-11-27 21:17:44,354 | INFO     | sum of square deviations: 264194752843.16455
[2025-11-27 16:20:37] 2025-11-27 21:17:44,372 | INFO     | sum of deviations: 3081273050373.9014
[2025-11-27 16:20:37] 2025-11-27 21:17:44,372 | INFO     | mean x: 1764249011.7594936
[2025-11-27 16:20:37] 2025-11-27 21:17:44,372 | INFO     | mean y: 2994740.789029536
[2025-11-27 16:20:37] 2025-11-27 21:17:44,372 | INFO     | intersect: -20573238797.469013
[2025-11-27 16:20:37] 2025-11-27 21:17:44,373 | INFO     | chi2: 9.263982018228738
[2025-11-27 16:20:37] 2025-11-27 21:17:44,374 | INFO     | current chi2=9.263982018228738 (change=27.374441936201688 %)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,375 | INFO     | sum of square deviations: 260037667001.20688
[2025-11-27 16:20:37] 2025-11-27 21:17:44,392 | INFO     | sum of deviations: 3155707641158.641
[2025-11-27 16:20:37] 2025-11-27 21:17:44,393 | INFO     | mean x: 1764248859.2778368
[2025-11-27 16:20:37] 2025-11-27 21:17:44,393 | INFO     | mean y: 2997465.394485684
[2025-11-27 16:20:37] 2025-11-27 21:17:44,393 | INFO     | intersect: -21407183876.15188
[2025-11-27 16:20:37] 2025-11-27 21:17:44,394 | INFO     | chi2: 8.900966117217452
[2025-11-27 16:20:37] 2025-11-27 21:17:44,394 | INFO     | current chi2=8.900966117217452 (change=3.918573031521213 %)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,394 | INFO     | right removable region: 942
[2025-11-27 16:20:37] 2025-11-27 21:17:44,396 | INFO     | sum of square deviations: 264191769281.6825
[2025-11-27 16:20:37] 2025-11-27 21:17:44,413 | INFO     | sum of deviations: 2338399736040.619
[2025-11-27 16:20:37] 2025-11-27 21:17:44,413 | INFO     | mean x: 1764249316.7584388
[2025-11-27 16:20:37] 2025-11-27 21:17:44,414 | INFO     | mean y: 2996059.579113924
[2025-11-27 16:20:37] 2025-11-27 21:17:44,414 | INFO     | intersect: -15612630982.227505
[2025-11-27 16:20:37] 2025-11-27 21:17:44,415 | INFO     | chi2: 8.651707826214489
[2025-11-27 16:20:37] 2025-11-27 21:17:44,415 | INFO     | current chi2=8.651707826214489 (change=32.1744032050814 %)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,416 | INFO     | sum of square deviations: 260032161452.69345
[2025-11-27 16:20:37] 2025-11-27 21:17:44,434 | INFO     | sum of deviations: 1979868300759.416
[2025-11-27 16:20:37] 2025-11-27 21:17:44,434 | INFO     | mean x: 1764249469.2863202
[2025-11-27 16:20:37] 2025-11-27 21:17:44,434 | INFO     | mean y: 3009202.7762460234
[2025-11-27 16:20:37] 2025-11-27 21:17:44,434 | INFO     | intersect: -13429873788.918886
[2025-11-27 16:20:37] 2025-11-27 21:17:44,435 | INFO     | chi2: 5.305279562757796
[2025-11-27 16:20:37] 2025-11-27 21:17:44,436 | INFO     | current chi2=5.305279562757796 (change=38.679395220872884 %)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,437 | INFO     | sum of square deviations: 255916644180.22208
[2025-11-27 16:20:37] 2025-11-27 21:17:44,454 | INFO     | sum of deviations: 1785023297482.2273
[2025-11-27 16:20:37] 2025-11-27 21:17:44,454 | INFO     | mean x: 1764249621.8102345
[2025-11-27 16:20:37] 2025-11-27 21:17:44,454 | INFO     | mean y: 3016416.018123667
[2025-11-27 16:20:37] 2025-11-27 21:17:44,455 | INFO     | intersect: -12302657126.99584
[2025-11-27 16:20:37] 2025-11-27 21:17:44,456 | INFO     | chi2: 4.317393588114317
[2025-11-27 16:20:37] 2025-11-27 21:17:44,456 | INFO     | current chi2=4.317393588114317 (change=18.62080900652774 %)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,456 | INFO     | left removable region: 30
[2025-11-27 16:20:37] 2025-11-27 21:17:44,457 | INFO     | sum of square deviations: 235223145963.20053
[2025-11-27 16:20:37] 2025-11-27 21:17:44,474 | INFO     | sum of deviations: 1992082210441.1277
[2025-11-27 16:20:37] 2025-11-27 21:17:44,474 | INFO     | mean x: 1764249743.8453948
[2025-11-27 16:20:37] 2025-11-27 21:17:44,474 | INFO     | mean y: 3041441.518640351
[2025-11-27 16:20:37] 2025-11-27 21:17:44,474 | INFO     | intersect: -14938220036.37843
[2025-11-27 16:20:37] 2025-11-27 21:17:44,475 | INFO     | chi2: 0.18190984173346686
[2025-11-27 16:20:37] 2025-11-27 21:17:44,476 | INFO     | current memory leak: 8.47 B/s (using 912 data points, chi2=0.18)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | could have reported an average CPU frequency of 2622 MHz (35 samples)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | ..............................
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . Timing measurements:
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . get job = 0 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . initial setup = 8 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . payload setup = 55 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . stage-in = 0 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . payload execution = 58155 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,477 | INFO     | . stage-out = 4 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,478 | INFO     | . log creation = 0 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,478 | INFO     | ..............................
[2025-11-27 16:20:37] 2025-11-27 21:17:44,604 | INFO     | 
[2025-11-27 16:20:37] 2025-11-27 21:17:44,605 | INFO     | job summary report
[2025-11-27 16:20:37] 2025-11-27 21:17:44,605 | INFO     | --------------------------------------------------
[2025-11-27 16:20:37] 2025-11-27 21:17:44,605 | INFO     | PanDA job id: 6898177887
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | task id: 47556173
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | errors: (none)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | pilot state: finished 
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | transexitcode: 0
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | exeerrorcode: 0
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | exeerrordiag: 
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | exitcode: 0
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | exitmsg: OK
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | cpuconsumptiontime: 258859 s
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | nevents: 1000
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | neventsw: 0
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | pid: 4062356
[2025-11-27 16:20:37] 2025-11-27 21:17:44,606 | INFO     | pgrp: 4062356
[2025-11-27 16:20:37] 2025-11-27 21:17:44,607 | INFO     | corecount: 9
[2025-11-27 16:20:37] 2025-11-27 21:17:44,607 | INFO     | event service: False
[2025-11-27 16:20:37] 2025-11-27 21:17:44,607 | INFO     | sizes: {0: 2284093, 1: 2284292, 2: 2284292, 3: 2284320, 14: 2284348, 25: 2284376, 34: 2284794, 36: 2284822, 58214: 2335706, 58220: 2344700, 58224: 2344756, 58233: 
[2025-11-27 16:20:37] 2025-11-27 21:17:44,607 | INFO     | --------------------------------------------------
[2025-11-27 16:20:37] 2025-11-27 21:17:44,607 | INFO     | 
[2025-11-27 16:20:37] 2025-11-27 21:17:44,607 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,643 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:20:37] 2025-11-27 21:17:44,644 | INFO     | job 6898177887 has completed (purged errors)
[2025-11-27 16:20:37] 2025-11-27 21:17:44,645 | INFO     | overall cleanup function is called
[2025-11-27 16:20:37] 2025-11-27 21:17:45,661 | INFO     | --- collectZombieJob: --- 10, [4062356]
[2025-11-27 16:20:37] 2025-11-27 21:17:45,661 | INFO     | zombie collector waiting for pid 4062356
[2025-11-27 16:20:37] 2025-11-27 21:17:45,664 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:20:37] 2025-11-27 21:17:45,664 | INFO     | collected zombie processes
[2025-11-27 16:20:37] 2025-11-27 21:17:45,664 | INFO     | will attempt to kill all subprocesses of pid=4062356
[2025-11-27 16:20:37] 2025-11-27 21:17:46,572 | INFO     | process IDs to be killed: [4062356] (in reverse order)
[2025-11-27 16:20:37] 2025-11-27 21:17:46,752 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:20:37] 2025-11-27 21:17:46,752 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:20:37] 2025-11-27 21:17:46,777 | INFO     | did not find any defunct processes belonging to 4062356
[2025-11-27 16:20:37] 2025-11-27 21:17:46,800 | INFO     | did not find any defunct processes belonging to 4062356
[2025-11-27 16:20:37] 2025-11-27 21:17:46,801 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:20:37] 2025-11-27 21:17:46,801 | INFO     | ready for new job
[2025-11-27 16:20:37] 2025-11-27 21:17:46,801 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:20:37] 2025-11-27 21:17:46,806 | INFO     | ***************************************
[2025-11-27 16:20:37] 2025-11-27 21:17:46,806 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:20:37] 2025-11-27 21:17:46,806 | INFO     | ***************************************
[2025-11-27 16:20:37] 2025-11-27 21:17:46,806 | INFO     | 
[2025-11-27 16:20:37] 2025-11-27 21:17:46,812 | INFO     | architecture information:
[2025-11-27 16:20:37] 2025-11-27 21:17:46,812 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:20:37] 2025-11-27 21:17:46,835 | INFO     | cat /etc/os-release:
[2025-11-27 16:20:37] NAME="CentOS Linux"
[2025-11-27 16:20:37] VERSION="7 (Core)"
[2025-11-27 16:20:37] ID="centos"
[2025-11-27 16:20:37] ID_LIKE="rhel fedora"
[2025-11-27 16:20:37] VERSION_ID="7"
[2025-11-27 16:20:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:20:37] ANSI_COLOR="0;31"
[2025-11-27 16:20:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:20:37] HOME_URL="https://www.centos.org/"
[2025-11-27 16:20:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:20:37] 
[2025-11-27 16:20:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:20:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:20:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:20:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:20:37] 
[2025-11-27 16:20:37] 2025-11-27 21:17:46,836 | INFO     | ***************************************
[2025-11-27 16:20:37] 2025-11-27 21:17:47,339 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 16:20:37] 2025-11-27 21:17:47,368 | INFO     | sufficient remaining disk space (82686509056 B)
[2025-11-27 16:20:37] 2025-11-27 21:17:47,368 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:20:37] 2025-11-27 21:17:47,368 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:20:37] 2025-11-27 21:17:47,368 | INFO     | update_server=False
[2025-11-27 16:20:37] 2025-11-27 21:17:47,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:20:37] 2025-11-27 21:17:47,369 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:20:37] 2025-11-27 21:17:47,369 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:20:37] 2025-11-27 21:17:47,369 | INFO     | aborting loop
[2025-11-27 16:20:37] 2025-11-27 21:17:47,383 | INFO     | all data control threads have been joined
[2025-11-27 16:20:37] 2025-11-27 21:17:47,769 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:20:37] 2025-11-27 21:17:48,032 | INFO     | all job control threads have been joined
[2025-11-27 16:20:37] 2025-11-27 21:17:48,179 | INFO     | all payload control threads have been joined
[2025-11-27 16:20:37] 2025-11-27 21:17:48,374 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:48,375 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:48,391 | INFO     | [data] control thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:48,420 | INFO     | [job] validate thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:48,685 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:48,725 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:48,729 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,050 | INFO     | [job] control thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,185 | INFO     | [payload] control thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,190 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,318 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,580 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,626 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:49,628 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:20:37] 2025-11-27 21:17:49,780 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:50,634 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:51,377 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:20:37] 2025-11-27 21:17:53,294 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:20:37] 2025-11-27 21:17:55,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140325098092352)>', '<ExcThread(monitor, started 140324223575808)>']
[2025-11-27 16:20:37] 2025-11-27 21:18:00,155 | INFO     | all workflow threads have been joined
[2025-11-27 16:20:37] 2025-11-27 21:18:00,155 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:20:37] 2025-11-27 21:18:00,156 | INFO     | traces error code: 0
[2025-11-27 16:20:37] 2025-11-27 21:18:00,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:20:37] 2025-11-27 21:18:17,951 | INFO     | PID=4026950 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:20:37] 2025-11-27 21:18:17,952 | INFO     | .. there are 55 such processes running
[2025-11-27 16:20:37] 2025-11-27 21:18:17,952 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:20:37] 2025-11-27 21:18:17,952 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:20:37] 2025-11-27 21:18:17,953 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:20:37] 2025-11-27 21:18:17,953 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:20:37] 2025-11-27 21:18:17,953 | INFO     | [monitor] control thread has ended
[2025-11-27 16:20:37] 2025-11-27 21:18:18,550 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:20:37] 2025-11-27 21:18:18,553 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:20:37] 2025-11-27 21:18:18,555 [wrapper] pilotpid: 4026950
[2025-11-27 16:20:37] 2025-11-27 21:18:18,557 [wrapper] Pilot exit status: 0
[2025-11-27 16:20:37] 2025-11-27 21:18:18,571 [wrapper] pandaids: 6898177887
[2025-11-27 16:20:37] 2025-11-27 21:18:18,689 [wrapper] cleanup supervisor_pilot   84296 4026951
[2025-11-27 16:20:37] 2025-11-27 21:18:18,692 [wrapper] Test setup, not cleaning
[2025-11-27 16:20:37] 2025-11-27 21:18:18,695 [wrapper] apfmon messages muted
[2025-11-27 16:20:37] 2025-11-27 21:18:18,698 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:20:37] 2025-11-27 21:18:18,700 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:20:37]  *** Error codes and diagnostics ***
[2025-11-27 16:20:37]     "exeErrorCode": 0,
[2025-11-27 16:20:37]     "exeErrorDiag": "",
[2025-11-27 16:20:37]     "pilotErrorCode": 0,
[2025-11-27 16:20:37]     "pilotErrorDiag": "",
[2025-11-27 16:20:37]  *** Listing of results directory ***
[2025-11-27 16:20:37] total 1311860
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 16:20:37] -rwx------. 1 boincer umatlas     36292 Nov 25 23:06 runpilot2-wrapper.sh
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:06 queuedata.json
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:20:37] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:04 run_atlas
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:04 job.xml
[2025-11-27 16:20:37] -rw-r--r--. 2 boincer umatlas 410550768 Nov 27 00:04 EVNT.47483658._003173.pool.root.1
[2025-11-27 16:20:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 16:20:37] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:04 shared
[2025-11-27 16:20:37] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 00:04 input.tar.gz
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:04 boinc_lockfile
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:04 pandaJob.out
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas        57 Nov 27 00:04 setup.sh.local
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 16:20:37] drwx------. 5 boincer umatlas      4096 Nov 27 00:06 pilot3
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas       531 Nov 27 16:06 boinc_task_state.xml
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas      6879 Nov 27 16:09 init_data.xml
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas 911626522 Nov 27 16:16 HITS.47556173._001292.pool.root.1
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas        95 Nov 27 16:17 pilot_heartbeat.json
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas      1059 Nov 27 16:17 memory_monitor_summary.json
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas   1516240 Nov 27 16:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas   2169598 Nov 27 16:17 log.47556173._001292.job.log.tgz.1
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas      8639 Nov 27 16:17 heartbeat.json
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas       823 Nov 27 16:18 pilotlog.txt
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas   6451376 Nov 27 16:18 log.47556173._001292.job.log.1
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas       353 Nov 27 16:18 output.list
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas       620 Nov 27 16:18 runtime_log
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas   8642560 Nov 27 16:18 result.tar.gz
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas       662 Nov 27 16:18 UL3NDmtyLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgtJKDmKSWDFm.diag
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 16:18 runtime_log.err
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 16:20 boinc_mmap_file
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas        28 Nov 27 16:20 wrapper_checkpoint.txt
[2025-11-27 16:20:37] -rw-r--r--. 1 boincer umatlas     21178 Nov 27 16:20 stderr.txt
[2025-11-27 16:20:37] HITS file was successfully produced:
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas 911626522 Nov 27 16:16 shared/HITS.pool.root.1
[2025-11-27 16:20:37]  *** Contents of shared directory: ***
[2025-11-27 16:20:37] total 1300240
[2025-11-27 16:20:37] -rw-r--r--. 2 boincer umatlas 410550768 Nov 27 00:04 ATLAS.root_0
[2025-11-27 16:20:37] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:04 start_atlas.sh
[2025-11-27 16:20:37] -rw-r--r--. 2 boincer umatlas    590098 Nov 27 00:04 input.tar.gz
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas 911626522 Nov 27 16:16 HITS.pool.root.1
[2025-11-27 16:20:37] -rw-------. 1 boincer umatlas   8642560 Nov 27 16:18 result.tar.gz
16:20:39 (4016287): run_atlas exited; CPU time 261251.371206
16:20:39 (4016287): called boinc_finish(0)

</stderr_txt>
]]>

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