Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:32 (974162): wrapper (7.7.26015): starting
00:03:32 (974162): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:03:32] Arguments: --nthreads 9
[2025-11-27 00:03:32] Threads: 9
[2025-11-27 00:03:32] Checking for CVMFS
[2025-11-27 00:03:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:33] 2.13.3.0 11066 31047 341212 153347 0 396 32095346 32935936 25927 16776704 0 90152481 99.435 130327942 38900 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:33] CVMFS is ok
[2025-11-27 00:03:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:33] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:33] Checking for apptainer binary...
[2025-11-27 00:03:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:33] Running /usr/bin/apptainer --version
[2025-11-27 00:03:33] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:34] c6-1-24-4.aglt2.org
[2025-11-27 00:03:34] apptainer works
[2025-11-27 00:03:34] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:03:34] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:03:34] Starting ATLAS job with PandaID=6897509115
[2025-11-27 00:03:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
00:20:08 (974162): BOINC client no longer exists - exiting
00:20:08 (974162): timer handler: client dead, exiting
00:28:05 (1116165): wrapper (7.7.26015): starting
00:28:05 (1116165): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:28:05] Arguments: --nthreads 9
[2025-11-27 00:28:05] Threads: 9
[2025-11-27 00:28:05] This job has been restarted, cleaning up previous attempt
[2025-11-27 00:28:05] Checking for CVMFS
[2025-11-27 00:28:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:28:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:28:06] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:28:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:28:07] 2.13.3.0 11066 31071 338432 153349 0 313 32223268 32935936 22867 16776704 0 90375147 99.436 130342729 38898 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:28:07] CVMFS is ok
[2025-11-27 00:28:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:28:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:28:07] Further information can be found at the LHC@home message board.
[2025-11-27 00:28:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:28:07] Checking for apptainer binary...
[2025-11-27 00:28:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:28:07] Running /usr/bin/apptainer --version
[2025-11-27 00:28:08] apptainer version 1.4.4-1.el9
[2025-11-27 00:28:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:28:08] c6-1-24-4.aglt2.org
[2025-11-27 00:28:08] apptainer works
[2025-11-27 00:28:08] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:28:08] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:28:08] Starting ATLAS job with PandaID=6897509115
[2025-11-27 00:28:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 11:01:25]  *** The last 200 lines of the pilot log: ***
[2025-11-28 11:01:25] 2025-11-28 16:00:10,104 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:01:25] 2025-11-28 16:00:11,960 | INFO     | time since job start (124302s) is within the limit (172800.0s)
[2025-11-28 11:01:25] 2025-11-28 16:00:12,613 | INFO     | monitor loop #7594: job 0:6897509115 is in state 'finished'
[2025-11-28 11:01:25] 2025-11-28 16:00:12,614 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:01:25] 2025-11-28 16:00:13,978 | INFO     | time since job start (124304s) is within the limit (172800.0s)
[2025-11-28 11:01:25] 2025-11-28 16:00:15,118 | INFO     | monitor loop #7595: job 0:6897509115 is in state 'finished'
[2025-11-28 11:01:25] 2025-11-28 16:00:15,119 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:01:25] 2025-11-28 16:00:15,986 | INFO     | time since job start (124306s) is within the limit (172800.0s)
[2025-11-28 11:01:25] 2025-11-28 16:00:17,648 | INFO     | monitor loop #7596: job 0:6897509115 is in state 'finished'
[2025-11-28 11:01:25] 2025-11-28 16:00:17,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:01:25] 2025-11-28 16:00:18,011 | INFO     | time since job start (124309s) is within the limit (172800.0s)
[2025-11-28 11:01:25] 2025-11-28 16:00:20,073 | INFO     | time since job start (124311s) is within the limit (172800.0s)
[2025-11-28 11:01:25] 2025-11-28 16:00:20,160 | INFO     | monitor loop #7597: job 0:6897509115 is in state 'finished'
[2025-11-28 11:01:25] 2025-11-28 16:00:20,161 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 11:01:25] 2025-11-28 16:00:20,818 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 11:01:25] 2025-11-28 16:00:20,831 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2805.0367678571433
[2025-11-28 11:01:25] 2025-11-28 16:00:20,871 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6897509115/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 11:01:25] 2025-11-28 16:00:20,872 | INFO     | extracted standard info from prmon json
[2025-11-28 11:01:25] 2025-11-28 16:00:20,872 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 11:01:25] 2025-11-28 16:00:20,872 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 11:01:25] 2025-11-28 16:00:21,099 | INFO     | fitting pss+swap vs Time
[2025-11-28 11:01:25] 2025-11-28 16:00:21,139 | INFO     | sum of square deviations: 2617191510478.305
[2025-11-28 11:01:25] 2025-11-28 16:00:21,330 | INFO     | sum of deviations: 9303583750731.525
[2025-11-28 11:01:25] 2025-11-28 16:00:21,335 | INFO     | mean x: 1764283436.5849705
[2025-11-28 11:01:25] 2025-11-28 16:00:21,335 | INFO     | mean y: 2995823.684675835
[2025-11-28 11:01:25] 2025-11-28 16:00:21,335 | INFO     | intersect: -6268673118.6071825
[2025-11-28 11:01:25] 2025-11-28 16:00:21,342 | INFO     | chi2: 30.95048934849251
[2025-11-28 11:01:25] 2025-11-28 16:00:21,346 | INFO     | sum of square deviations: 2597959185727.6934
[2025-11-28 11:01:25] 2025-11-28 16:00:21,561 | INFO     | sum of deviations: 10125940815533.135
[2025-11-28 11:01:25] 2025-11-28 16:00:21,561 | INFO     | mean x: 1764283284.089611
[2025-11-28 11:01:25] 2025-11-28 16:00:21,561 | INFO     | mean y: 3002343.614475628
[2025-11-28 11:01:25] 2025-11-28 16:00:21,562 | INFO     | intersect: -6873559926.751526
[2025-11-28 11:01:25] 2025-11-28 16:00:21,568 | INFO     | chi2: 26.4736159641076
[2025-11-28 11:01:25] 2025-11-28 16:00:21,569 | INFO     | current chi2=26.4736159641076 (change=14.464628762333161 %)
[2025-11-28 11:01:25] 2025-11-28 16:00:21,569 | INFO     | right removable region: 2030
[2025-11-28 11:01:25] 2025-11-28 16:00:21,571 | INFO     | sum of square deviations: 2597956720226.5107
[2025-11-28 11:01:25] 2025-11-28 16:00:21,735 | INFO     | sum of deviations: 8643298033465.29
[2025-11-28 11:01:25] 2025-11-28 16:00:21,735 | INFO     | mean x: 1764283589.0901034
[2025-11-28 11:01:25] 2025-11-28 16:00:21,736 | INFO     | mean y: 3001057.2225504676
[2025-11-28 11:01:25] 2025-11-28 16:00:21,736 | INFO     | intersect: -5866699833.994769
[2025-11-28 11:01:25] 2025-11-28 16:00:21,746 | INFO     | chi2: 28.59042614577799
[2025-11-28 11:01:25] 2025-11-28 16:00:21,746 | INFO     | current chi2=28.59042614577799 (change=7.625285584796323 %)
[2025-11-28 11:01:25] 2025-11-28 16:00:21,746 | INFO     | left removable region: 10
[2025-11-28 11:01:25] 2025-11-28 16:00:21,757 | INFO     | sum of square deviations: 2555977215825.688
[2025-11-28 11:01:25] 2025-11-28 16:00:21,993 | INFO     | sum of deviations: 9391391460493.36
[2025-11-28 11:01:25] 2025-11-28 16:00:22,001 | INFO     | mean x: 1764283558.5925744
[2025-11-28 11:01:25] 2025-11-28 16:00:22,001 | INFO     | mean y: 3010293.2628712873
[2025-11-28 11:01:25] 2025-11-28 16:00:22,002 | INFO     | intersect: -6479472196.590869
[2025-11-28 11:01:25] 2025-11-28 16:00:22,013 | INFO     | chi2: 23.413736814508457
[2025-11-28 11:01:25] 2025-11-28 16:00:22,014 | INFO     | current memory leak: 3.67 B/s (using 2020 data points, chi2=23.41)
[2025-11-28 11:01:25] 2025-11-28 16:00:22,026 | INFO     | could have reported an average CPU frequency of 2891 MHz (71 samples)
[2025-11-28 11:01:25] 2025-11-28 16:00:22,026 | INFO     | ..............................
[2025-11-28 11:01:25] 2025-11-28 16:00:22,027 | INFO     | . Timing measurements:
[2025-11-28 11:01:25] 2025-11-28 16:00:22,027 | INFO     | . get job = 0 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,027 | INFO     | . initial setup = 1 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,027 | INFO     | . payload setup = 16 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,027 | INFO     | . stage-in = 0 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,027 | INFO     | . payload execution = 124188 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,028 | INFO     | . stage-out = 26 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,028 | INFO     | . log creation = 9 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,028 | INFO     | ..............................
[2025-11-28 11:01:25] 2025-11-28 16:00:22,182 | INFO     | time since job start (124313s) is within the limit (172800.0s)
[2025-11-28 11:01:25] 2025-11-28 16:00:22,506 | INFO     | 
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | job summary report
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | --------------------------------------------------
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | PanDA job id: 6897509115
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | task id: 47556161
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | errors: (none)
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | pilot state: finished 
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | transexitcode: 0
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | exeerrorcode: 0
[2025-11-28 11:01:25] 2025-11-28 16:00:22,537 | INFO     | exeerrordiag: 
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | exitcode: 0
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | exitmsg: OK
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | cpuconsumptiontime: 255203 s
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | nevents: 1000
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | neventsw: 0
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | pid: 1167737
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | pgrp: 1167737
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | corecount: 9
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | event service: False
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | sizes: {0: 2284038, 1: 2284293, 11: 2284555, 12: 2284583, 124208: 2367486, 124211: 2367485, 124238: 2376719, 124293: 2376909}
[2025-11-28 11:01:25] 2025-11-28 16:00:22,538 | INFO     | --------------------------------------------------
[2025-11-28 11:01:25] 2025-11-28 16:00:22,539 | INFO     | 
[2025-11-28 11:01:25] 2025-11-28 16:00:22,539 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,815 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,816 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 11:01:25] 2025-11-28 16:00:22,817 | INFO     | job 6897509115 has completed (purged errors)
[2025-11-28 11:01:25] 2025-11-28 16:00:22,817 | INFO     | overall cleanup function is called
[2025-11-28 11:01:25] 2025-11-28 16:00:23,957 | INFO     | --- collectZombieJob: --- 10, [1167737]
[2025-11-28 11:01:25] 2025-11-28 16:00:23,971 | INFO     | zombie collector waiting for pid 1167737
[2025-11-28 11:01:25] 2025-11-28 16:00:23,972 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 11:01:25] 2025-11-28 16:00:23,972 | INFO     | collected zombie processes
[2025-11-28 11:01:25] 2025-11-28 16:00:23,972 | INFO     | will attempt to kill all subprocesses of pid=1167737
[2025-11-28 11:01:25] 2025-11-28 16:00:28,974 | INFO     | PID=1135665 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:01:25] 2025-11-28 16:00:28,974 | INFO     | .. there are 34 such processes running
[2025-11-28 11:01:25] 2025-11-28 16:00:29,019 | INFO     | process IDs to be killed: [1167737] (in reverse order)
[2025-11-28 11:01:25] 2025-11-28 16:00:29,282 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 11:01:25] 2025-11-28 16:00:29,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 11:01:25] 2025-11-28 16:00:29,316 | INFO     | did not find any defunct processes belonging to 1167737
[2025-11-28 11:01:25] 2025-11-28 16:00:29,350 | INFO     | did not find any defunct processes belonging to 1167737
[2025-11-28 11:01:25] 2025-11-28 16:00:29,354 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 11:01:25] 2025-11-28 16:00:29,354 | INFO     | ready for new job
[2025-11-28 11:01:25] 2025-11-28 16:00:29,354 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 11:01:25] 2025-11-28 16:00:29,388 | INFO     | ***************************************
[2025-11-28 11:01:25] 2025-11-28 16:00:29,388 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 11:01:25] 2025-11-28 16:00:29,388 | INFO     | ***************************************
[2025-11-28 11:01:25] 2025-11-28 16:00:29,388 | INFO     | 
[2025-11-28 11:01:25] 2025-11-28 16:00:29,396 | INFO     | architecture information:
[2025-11-28 11:01:25] 2025-11-28 16:00:29,415 | INFO     | executing command: cat /etc/os-release
[2025-11-28 11:01:25] 2025-11-28 16:00:29,491 | INFO     | cat /etc/os-release:
[2025-11-28 11:01:25] NAME="CentOS Linux"
[2025-11-28 11:01:25] VERSION="7 (Core)"
[2025-11-28 11:01:25] ID="centos"
[2025-11-28 11:01:25] ID_LIKE="rhel fedora"
[2025-11-28 11:01:25] VERSION_ID="7"
[2025-11-28 11:01:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 11:01:25] ANSI_COLOR="0;31"
[2025-11-28 11:01:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 11:01:25] HOME_URL="https://www.centos.org/"
[2025-11-28 11:01:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 11:01:25] 
[2025-11-28 11:01:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 11:01:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 11:01:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 11:01:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 11:01:25] 
[2025-11-28 11:01:25] 2025-11-28 16:00:29,491 | INFO     | ***************************************
[2025-11-28 11:01:25] 2025-11-28 16:00:29,994 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-28 11:01:25] 2025-11-28 16:00:30,082 | INFO     | sufficient remaining disk space (68172120064 B)
[2025-11-28 11:01:25] 2025-11-28 16:00:30,082 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 11:01:25] 2025-11-28 16:00:30,082 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 11:01:25] 2025-11-28 16:00:30,083 | INFO     | update_server=False
[2025-11-28 11:01:25] 2025-11-28 16:00:30,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 11:01:25] 2025-11-28 16:00:30,083 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:01:25] 2025-11-28 16:00:30,083 | INFO     | aborting loop
[2025-11-28 11:01:25] 2025-11-28 16:00:30,181 | INFO     | all job control threads have been joined
[2025-11-28 11:01:25] 2025-11-28 16:00:30,182 | INFO     | all data control threads have been joined
[2025-11-28 11:01:25] 2025-11-28 16:00:30,405 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 11:01:25] 2025-11-28 16:00:31,083 | INFO     | all payload control threads have been joined
[2025-11-28 11:01:25] 2025-11-28 16:00:31,088 | INFO     | [job] retrieve thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,140 | INFO     | [job] job monitor thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,149 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,150 | INFO     | [data] copytool_in thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,150 | INFO     | [job] validate thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,187 | INFO     | [job] control thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,211 | INFO     | [data] control thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,625 | INFO     | [payload] validate_post thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:31,645 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 11:01:25] 2025-11-28 16:00:31,842 | INFO     | [payload] failed_post thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:32,017 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:32,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:32,034 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:32,089 | INFO     | [payload] control thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:32,410 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 11:01:25] 2025-11-28 16:00:32,414 | INFO     | [data] copytool_out thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:32,654 | INFO     | [job] queue monitor thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:00:36,434 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 11:01:25] 2025-11-28 16:01:04,615 | INFO     | PID=1135665 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 11:01:25] 2025-11-28 16:01:04,616 | INFO     | .. there are 34 such processes running
[2025-11-28 11:01:25] 2025-11-28 16:01:04,617 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 11:01:25] 2025-11-28 16:01:04,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 11:01:25] 2025-11-28 16:01:04,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 11:01:25] 2025-11-28 16:01:15,977 | INFO     | [monitor] cgroup control has ended
[2025-11-28 11:01:25] 2025-11-28 16:01:17,100 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140403296126784)>', '<ExcThread(monitor, started 140402640267008)>']
[2025-11-28 11:01:25] 2025-11-28 16:01:17,705 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 11:01:25] 2025-11-28 16:01:17,706 | INFO     | [monitor] control thread has ended
[2025-11-28 11:01:25] 2025-11-28 16:01:22,126 | INFO     | all workflow threads have been joined
[2025-11-28 11:01:25] 2025-11-28 16:01:22,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 11:01:25] 2025-11-28 16:01:22,127 | INFO     | traces error code: 0
[2025-11-28 11:01:25] 2025-11-28 16:01:22,127 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 11:01:25] 2025-11-28 16:01:23,570 [wrapper] ==== pilot stdout END ====
[2025-11-28 11:01:25] 2025-11-28 16:01:23,638 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 11:01:25] 2025-11-28 16:01:23,704 [wrapper] pilotpid: 1135665
[2025-11-28 11:01:25] 2025-11-28 16:01:23,767 [wrapper] Pilot exit status: 0
[2025-11-28 11:01:25] 2025-11-28 16:01:23,878 [wrapper] pandaids: 6897509115 6897509115
[2025-11-28 11:01:25] 2025-11-28 16:01:24,087 [wrapper] cleanup supervisor_pilot 3716079 1135667
[2025-11-28 11:01:25] 2025-11-28 16:01:24,152 [wrapper] Test setup, not cleaning
[2025-11-28 11:01:25] 2025-11-28 16:01:24,218 [wrapper] apfmon messages muted
[2025-11-28 11:01:25] 2025-11-28 16:01:24,247 [wrapper] ==== wrapper stdout END ====
[2025-11-28 11:01:25] 2025-11-28 16:01:24,283 [wrapper] ==== wrapper stderr END ====
[2025-11-28 11:01:25]  *** Error codes and diagnostics ***
[2025-11-28 11:01:25]     "exeErrorCode": 0,
[2025-11-28 11:01:25]     "exeErrorDiag": "",
[2025-11-28 11:01:25]     "pilotErrorCode": 0,
[2025-11-28 11:01:25]     "pilotErrorDiag": "",
[2025-11-28 11:01:25]  *** Listing of results directory ***
[2025-11-28 11:01:25] total 1755592
[2025-11-28 11:01:25] drwx------. 5 boincer umatlas      4096 Nov  5 12:16 pilot3
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-28 11:01:25] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 11:01:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-28 11:01:25] -rw-r--r--. 3 boincer umatlas 411333227 Nov 27 00:03 EVNT.47483658._002287.pool.root.1
[2025-11-28 11:01:25] -rw-r--r--. 3 boincer umatlas 411333227 Nov 27 00:03 ATLAS.root_0
[2025-11-28 11:01:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-28 11:01:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-28 11:01:25] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:03 input.tar.gz
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas      2786 Nov 27 00:28 pandaJob.out
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas        57 Nov 27 00:28 setup.sh.local
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas    991578 Nov 27 00:28 agis_schedconf.cvmfs.json
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas       533 Nov 28 10:02 boinc_task_state.xml
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas 933402188 Nov 28 10:54 HITS.47556161._002704.pool.root.1
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas      1070 Nov 28 10:58 memory_monitor_summary.json
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas   1516240 Nov 28 10:59 agis_ddmendpoints.agis.ALL.json
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas   3008381 Nov 28 10:59 log.47556161._002704.job.log.tgz.1
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas      8647 Nov 28 11:00 heartbeat.json
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas      6846 Nov 28 11:00 init_data.xml
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas        96 Nov 28 11:01 pilot_heartbeat.json
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas      4824 Nov 28 11:01 pilotlog.txt
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 11:01 boinc_mmap_file
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas        29 Nov 28 11:01 wrapper_checkpoint.txt
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas  15853463 Nov 28 11:01 log.47556161._002704.job.log.1
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas       353 Nov 28 11:01 output.list
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas       620 Nov 28 11:01 runtime_log
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas  18882560 Nov 28 11:01 result.tar.gz
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas       793 Nov 28 11:01 snsLDm6aBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmbaMKDmjYCoDn.diag
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas      9434 Nov 28 11:01 runtime_log.err
[2025-11-28 11:01:25] -rw-r--r--. 1 boincer umatlas     24143 Nov 28 11:01 stderr.txt
[2025-11-28 11:01:25] HITS file was successfully produced:
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas 933402188 Nov 28 10:54 shared/HITS.pool.root.1
[2025-11-28 11:01:25]  *** Contents of shared directory: ***
[2025-11-28 11:01:25] total 1332268
[2025-11-28 11:01:25] -rw-r--r--. 3 boincer umatlas 411333227 Nov 27 00:03 ATLAS.root_0
[2025-11-28 11:01:25] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-28 11:01:25] -rw-r--r--. 2 boincer umatlas    590107 Nov 27 00:03 input.tar.gz
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas 933402188 Nov 28 10:54 HITS.pool.root.1
[2025-11-28 11:01:25] -rw-------. 1 boincer umatlas  18882560 Nov 28 11:01 result.tar.gz
11:01:27 (1116165): run_atlas exited; CPU time 258520.964125
11:01:27 (1116165): called boinc_finish(0)

</stderr_txt>
]]>

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