Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:46 (3683395): wrapper (7.7.26015): starting
00:03:46 (3683395): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:03:46] Arguments: --nthreads 8
[2025-11-27 00:03:46] Threads: 8
[2025-11-27 00:03:46] Checking for CVMFS
[2025-11-27 00:03:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:49] 2.13.3.0 9582 31023 268740 153347 1 907 34095514 40960001 76807 16776704 0 397194479 99.725 273582493 48404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:49] CVMFS is ok
[2025-11-27 00:03:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:49] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:49] Checking for apptainer binary...
[2025-11-27 00:03:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:49] Running /usr/bin/apptainer --version
[2025-11-27 00:03:49] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:50] c8-7-4.aglt2.org
[2025-11-27 00:03:50] apptainer works
[2025-11-27 00:03:50] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:03:50] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:03:50] Starting ATLAS job with PandaID=6898178275
[2025-11-27 00:03:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:01:36]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:01:36] 2025-11-27 14:59:23,303 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:01:36] 2025-11-27 14:59:25,778 | INFO     | PID=3708604 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:01:36] 2025-11-27 14:59:25,779 | INFO     | .. there are 93 such processes running
[2025-11-27 10:01:36] 2025-11-27 14:59:25,839 | INFO     | monitor loop #1987: job 0:6898178275 is in state 'finished'
[2025-11-27 10:01:36] 2025-11-27 14:59:25,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:01:36] 2025-11-27 14:59:26,779 | INFO     | time since job start (35641s) is within the limit (172800.0s)
[2025-11-27 10:01:36] 2025-11-27 14:59:28,350 | INFO     | monitor loop #1988: job 0:6898178275 is in state 'finished'
[2025-11-27 10:01:36] 2025-11-27 14:59:28,351 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:01:36] 2025-11-27 14:59:28,786 | INFO     | time since job start (35643s) is within the limit (172800.0s)
[2025-11-27 10:01:36] 2025-11-27 14:59:30,793 | INFO     | time since job start (35645s) is within the limit (172800.0s)
[2025-11-27 10:01:36] 2025-11-27 14:59:30,854 | INFO     | monitor loop #1989: job 0:6898178275 is in state 'finished'
[2025-11-27 10:01:36] 2025-11-27 14:59:30,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:01:36] 2025-11-27 14:59:32,800 | INFO     | time since job start (35647s) is within the limit (172800.0s)
[2025-11-27 10:01:36] 2025-11-27 14:59:33,389 | INFO     | monitor loop #1990: job 0:6898178275 is in state 'finished'
[2025-11-27 10:01:36] 2025-11-27 14:59:33,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:01:36] 2025-11-27 14:59:33,947 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 10:01:36] 2025-11-27 14:59:33,952 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3798.6865234375005
[2025-11-27 10:01:36] 2025-11-27 14:59:33,966 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6898178275/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:01:36] 2025-11-27 14:59:33,967 | INFO     | extracted standard info from prmon json
[2025-11-27 10:01:36] 2025-11-27 14:59:33,967 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:01:36] 2025-11-27 14:59:33,967 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:01:36] 2025-11-27 14:59:33,973 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:01:36] 2025-11-27 14:59:33,975 | INFO     | sum of square deviations: 60499995448.77757
[2025-11-27 10:01:36] 2025-11-27 14:59:33,990 | INFO     | sum of deviations: 698299302698.7347
[2025-11-27 10:01:36] 2025-11-27 14:59:33,990 | INFO     | mean x: 1764237792.6327586
[2025-11-27 10:01:36] 2025-11-27 14:59:33,990 | INFO     | mean y: 2802157.003448276
[2025-11-27 10:01:36] 2025-11-27 14:59:33,990 | INFO     | intersect: -20360274092.03952
[2025-11-27 10:01:36] 2025-11-27 14:59:33,991 | INFO     | chi2: 21.174926761989717
[2025-11-27 10:01:36] 2025-11-27 14:59:33,991 | INFO     | sum of square deviations: 58948966742.306076
[2025-11-27 10:01:36] 2025-11-27 14:59:33,995 | INFO     | sum of deviations: 889655649785.3905
[2025-11-27 10:01:36] 2025-11-27 14:59:33,995 | INFO     | mean x: 1764237640.1426086
[2025-11-27 10:01:36] 2025-11-27 14:59:33,996 | INFO     | mean y: 2820973.7391304346
[2025-11-27 10:01:36] 2025-11-27 14:59:33,996 | INFO     | intersect: -26622988957.386986
[2025-11-27 10:01:36] 2025-11-27 14:59:33,996 | INFO     | chi2: 17.846577556665498
[2025-11-27 10:01:36] 2025-11-27 14:59:33,996 | INFO     | current chi2=17.846577556665498 (change=15.718350494126899 %)
[2025-11-27 10:01:36] 2025-11-27 14:59:33,996 | INFO     | right removable region: 574
[2025-11-27 10:01:36] 2025-11-27 14:59:33,996 | INFO     | sum of square deviations: 58948565972.306076
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | sum of deviations: 464400139355.3389
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | mean x: 1764237945.1426086
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | mean y: 2825146.3739130436
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | intersect: -13895941245.4178
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | chi2: 16.517747040084345
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | current chi2=16.517747040084345 (change=21.99384099058748 %)
[2025-11-27 10:01:36] 2025-11-27 14:59:34,001 | INFO     | left removable region: 10
[2025-11-27 10:01:36] 2025-11-27 14:59:34,002 | INFO     | sum of square deviations: 55629715899.66503
[2025-11-27 10:01:36] 2025-11-27 14:59:34,007 | INFO     | sum of deviations: 495274795452.0319
[2025-11-27 10:01:36] 2025-11-27 14:59:34,007 | INFO     | mean x: 1764237914.6648936
[2025-11-27 10:01:36] 2025-11-27 14:59:34,007 | INFO     | mean y: 2870284.0319148935
[2025-11-27 10:01:36] 2025-11-27 14:59:34,007 | INFO     | intersect: -15704248801.212881
[2025-11-27 10:01:36] 2025-11-27 14:59:34,019 | INFO     | chi2: 8.607329083495214
[2025-11-27 10:01:36] 2025-11-27 14:59:34,020 | INFO     | current memory leak: 8.90 B/s (using 564 data points, chi2=8.61)
[2025-11-27 10:01:36] 2025-11-27 14:59:34,020 | INFO     | could have reported an average CPU frequency of 3799 MHz (23 samples)
[2025-11-27 10:01:36] 2025-11-27 14:59:34,020 | INFO     | ..............................
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . Timing measurements:
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . get job = 0 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . initial setup = 4 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . payload setup = 62 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . stage-in = 0 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . payload execution = 35424 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . stage-out = 8 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | . log creation = 3 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,021 | INFO     | ..............................
[2025-11-27 10:01:36] 2025-11-27 14:59:34,129 | INFO     | 
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | job summary report
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | --------------------------------------------------
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | PanDA job id: 6898178275
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | task id: 47556173
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | errors: (none)
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | pilot state: finished 
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | transexitcode: 0
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | exeerrorcode: 0
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | exeerrordiag: 
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | exitcode: 0
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | exitmsg: OK
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | cpuconsumptiontime: 135551 s
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | nevents: 1000
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | neventsw: 0
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | pid: 3760220
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | pgrp: 3760220
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | corecount: 8
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | event service: False
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 22: 2284321, 33: 2284349, 38: 2284667, 44: 2284823, 35491: 2325589, 35500: 2334613, 35504: 2334669, 35559: 2334915}
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | --------------------------------------------------
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | 
[2025-11-27 10:01:36] 2025-11-27 14:59:34,130 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,266 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:01:36] 2025-11-27 14:59:34,266 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,266 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:01:36] 2025-11-27 14:59:34,266 | INFO     | job 6898178275 has completed (purged errors)
[2025-11-27 10:01:36] 2025-11-27 14:59:34,266 | INFO     | overall cleanup function is called
[2025-11-27 10:01:36] 2025-11-27 14:59:35,331 | INFO     | --- collectZombieJob: --- 10, [3760220]
[2025-11-27 10:01:36] 2025-11-27 14:59:35,332 | INFO     | zombie collector waiting for pid 3760220
[2025-11-27 10:01:36] 2025-11-27 14:59:35,332 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:01:36] 2025-11-27 14:59:35,332 | INFO     | collected zombie processes
[2025-11-27 10:01:36] 2025-11-27 14:59:35,332 | INFO     | will attempt to kill all subprocesses of pid=3760220
[2025-11-27 10:01:36] 2025-11-27 14:59:37,013 | INFO     | process IDs to be killed: [3760220] (in reverse order)
[2025-11-27 10:01:36] 2025-11-27 14:59:37,499 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:01:36] 2025-11-27 14:59:37,499 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:01:36] 2025-11-27 14:59:37,552 | INFO     | did not find any defunct processes belonging to 3760220
[2025-11-27 10:01:36] 2025-11-27 14:59:37,665 | INFO     | did not find any defunct processes belonging to 3760220
[2025-11-27 10:01:36] 2025-11-27 14:59:37,701 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:01:36] 2025-11-27 14:59:37,702 | INFO     | ready for new job
[2025-11-27 10:01:36] 2025-11-27 14:59:37,702 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:01:36] 2025-11-27 14:59:37,704 | INFO     | ***************************************
[2025-11-27 10:01:36] 2025-11-27 14:59:37,704 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:01:36] 2025-11-27 14:59:37,704 | INFO     | ***************************************
[2025-11-27 10:01:36] 2025-11-27 14:59:37,705 | INFO     | 
[2025-11-27 10:01:36] 2025-11-27 14:59:37,713 | INFO     | architecture information:
[2025-11-27 10:01:36] 2025-11-27 14:59:37,729 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:01:36] 2025-11-27 14:59:37,838 | INFO     | cat /etc/os-release:
[2025-11-27 10:01:36] NAME="CentOS Linux"
[2025-11-27 10:01:36] VERSION="7 (Core)"
[2025-11-27 10:01:36] ID="centos"
[2025-11-27 10:01:36] ID_LIKE="rhel fedora"
[2025-11-27 10:01:36] VERSION_ID="7"
[2025-11-27 10:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:01:36] ANSI_COLOR="0;31"
[2025-11-27 10:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:01:36] HOME_URL="https://www.centos.org/"
[2025-11-27 10:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:01:36] 
[2025-11-27 10:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:01:36] 
[2025-11-27 10:01:36] 2025-11-27 14:59:37,838 | INFO     | ***************************************
[2025-11-27 10:01:36] 2025-11-27 14:59:38,342 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-11-27 10:01:36] 2025-11-27 14:59:38,404 | INFO     | sufficient remaining disk space (160086097920 B)
[2025-11-27 10:01:36] 2025-11-27 14:59:38,405 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:01:36] 2025-11-27 14:59:38,405 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:01:36] 2025-11-27 14:59:38,405 | INFO     | update_server=False
[2025-11-27 10:01:36] 2025-11-27 14:59:38,405 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:01:36] 2025-11-27 14:59:38,416 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 10:01:36] 2025-11-27 14:59:38,417 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 10:01:36] 2025-11-27 14:59:38,417 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:01:36] 2025-11-27 14:59:38,417 | INFO     | will abort loop
[2025-11-27 10:01:36] 2025-11-27 14:59:38,694 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:01:36] 2025-11-27 14:59:38,695 | INFO     | all data control threads have been joined
[2025-11-27 10:01:36] 2025-11-27 14:59:39,104 | INFO     | all job control threads have been joined
[2025-11-27 10:01:36] 2025-11-27 14:59:39,168 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:01:36] 2025-11-27 14:59:39,247 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:01:36] 2025-11-27 14:59:39,294 | INFO     | all payload control threads have been joined
[2025-11-27 10:01:36] 2025-11-27 14:59:39,411 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:39,422 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:39,641 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:39,669 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:39,700 | INFO     | [data] control thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:39,780 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,110 | INFO     | [job] control thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,177 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,287 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,300 | INFO     | [payload] control thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,622 | INFO     | [job] validate thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,623 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,653 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,701 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:40,715 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:01:36] 2025-11-27 14:59:43,259 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:01:36] 2025-11-27 15:00:08,025 | INFO     | PID=3708604 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:01:36] 2025-11-27 15:00:08,025 | INFO     | .. there are 92 such processes running
[2025-11-27 10:01:36] 2025-11-27 15:00:08,026 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:01:36] 2025-11-27 15:00:08,026 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:01:36] 2025-11-27 15:00:08,026 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:01:36] 2025-11-27 15:00:26,974 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:01:36] 2025-11-27 15:00:27,379 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140301755590464)>', '<ExcThread(monitor, started 140301255558912)>']
[2025-11-27 10:01:36] 2025-11-27 15:00:28,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:01:36] 2025-11-27 15:00:28,169 | INFO     | [monitor] control thread has ended
[2025-11-27 10:01:36] 2025-11-27 15:00:32,405 | INFO     | all workflow threads have been joined
[2025-11-27 10:01:36] 2025-11-27 15:00:32,406 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:01:36] 2025-11-27 15:00:32,406 | INFO     | traces error code: 0
[2025-11-27 10:01:36] 2025-11-27 15:00:32,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:01:36] 2025-11-27 15:00:33,199 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:01:36] 2025-11-27 15:00:33,224 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:01:36] 2025-11-27 15:00:33,244 [wrapper] pilotpid: 3708604
[2025-11-27 10:01:36] 2025-11-27 15:00:33,260 [wrapper] Pilot exit status: 0
[2025-11-27 10:01:36] 2025-11-27 15:00:33,381 [wrapper] pandaids: 6898178275
[2025-11-27 10:01:36] 2025-11-27 15:00:33,712 [wrapper] cleanup supervisor_pilot  686888 3708605
[2025-11-27 10:01:36] 2025-11-27 15:00:33,737 [wrapper] Test setup, not cleaning
[2025-11-27 10:01:36] 2025-11-27 15:00:33,753 [wrapper] apfmon messages muted
[2025-11-27 10:01:36] 2025-11-27 15:00:33,757 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:01:36] 2025-11-27 15:00:33,759 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:01:36]  *** Error codes and diagnostics ***
[2025-11-27 10:01:36]     "exeErrorCode": 0,
[2025-11-27 10:01:36]     "exeErrorDiag": "",
[2025-11-27 10:01:36]     "pilotErrorCode": 0,
[2025-11-27 10:01:36]     "pilotErrorDiag": "",
[2025-11-27 10:01:36]  *** Listing of results directory ***
[2025-11-27 10:01:36] total 1313552
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 10:01:36] -rwx------. 1 boincer umatlas     36292 Nov 25 23:06 runpilot2-wrapper.sh
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:06 queuedata.json
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:01:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 10:01:36] -rw-r--r--. 2 boincer umatlas 412339268 Nov 27 00:03 EVNT.47483658._003174.pool.root.1
[2025-11-27 10:01:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 10:01:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 10:01:36] -rw-r--r--. 2 boincer umatlas    590091 Nov 27 00:03 input.tar.gz
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 10:01:36] drwx------. 5 boincer umatlas      4096 Nov 27 00:05 pilot3
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas       533 Nov 27 09:41 boinc_task_state.xml
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas 916584549 Nov 27 09:57 HITS.47556173._001302.pool.root.1
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas      1053 Nov 27 09:58 memory_monitor_summary.json
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas   1516240 Nov 27 09:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas   1805996 Nov 27 09:58 log.47556173._001302.job.log.tgz.1
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas      8592 Nov 27 09:59 heartbeat.json
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas        95 Nov 27 10:00 pilot_heartbeat.json
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas      5012 Nov 27 10:00 pilotlog.txt
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas   4311988 Nov 27 10:00 log.47556173._001302.job.log.1
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas       353 Nov 27 10:00 output.list
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:00 runtime_log
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas   6133760 Nov 27 10:00 result.tar.gz
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas      9351 Nov 27 10:00 runtime_log.err
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas       658 Nov 27 10:00 Bv6NDmtyLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmitJKDmMkahkm.diag
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 10:01 init_data.xml
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:01 boinc_mmap_file
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:01 wrapper_checkpoint.txt
[2025-11-27 10:01:36] -rw-r--r--. 1 boincer umatlas     21887 Nov 27 10:01 stderr.txt
[2025-11-27 10:01:36] HITS file was successfully produced:
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas 916584549 Nov 27 09:57 shared/HITS.pool.root.1
[2025-11-27 10:01:36]  *** Contents of shared directory: ***
[2025-11-27 10:01:36] total 1304376
[2025-11-27 10:01:36] -rw-r--r--. 2 boincer umatlas 412339268 Nov 27 00:03 ATLAS.root_0
[2025-11-27 10:01:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 10:01:36] -rw-r--r--. 2 boincer umatlas    590091 Nov 27 00:03 input.tar.gz
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas 916584549 Nov 27 09:57 HITS.pool.root.1
[2025-11-27 10:01:36] -rw-------. 1 boincer umatlas   6133760 Nov 27 10:00 result.tar.gz
10:01:38 (3683395): run_atlas exited; CPU time 136466.077477
10:01:38 (3683395): called boinc_finish(0)

</stderr_txt>
]]>

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