Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:17 (1082565): wrapper (7.7.26015): starting
00:03:17 (1082565): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:03:17] Arguments: --nthreads 9
[2025-11-27 00:03:17] Threads: 9
[2025-11-27 00:03:17] Checking for CVMFS
[2025-11-27 00:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:19] 2.13.3.0 15397 30906 250732 153347 2 771 16554545 32935936 57735 16776704 0 319096055 99.619 307526723 35705 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:19] CVMFS is ok
[2025-11-27 00:03:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:19] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:19] Checking for apptainer binary...
[2025-11-27 00:03:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:19] Running /usr/bin/apptainer --version
[2025-11-27 00:03:19] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:19] c7-16-8.aglt2.org
[2025-11-27 00:03:19] apptainer works
[2025-11-27 00:03:19] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:03:19] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:03:19] Starting ATLAS job with PandaID=6898177047
[2025-11-27 00:03:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:12:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:12:54] 2025-11-27 20:17:54,186 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:12:54] 2025-11-27 20:17:54,186 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:12:54] 2025-11-27 20:17:54,198 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:12:54] 2025-11-27 20:17:54,199 | INFO     | sum of square deviations: 224546142704.7496
[2025-11-27 19:12:54] 2025-11-27 20:17:54,217 | INFO     | sum of deviations: 2305621690492.728
[2025-11-27 19:12:54] 2025-11-27 20:17:54,217 | INFO     | mean x: 1764247249.0167038
[2025-11-27 19:12:54] 2025-11-27 20:17:54,217 | INFO     | mean y: 3196695.618040089
[2025-11-27 19:12:54] 2025-11-27 20:17:54,218 | INFO     | intersect: -18111951824.53954
[2025-11-27 19:12:54] 2025-11-27 20:17:54,218 | INFO     | chi2: 10.865454358358695
[2025-11-27 19:12:54] 2025-11-27 20:17:54,219 | INFO     | sum of square deviations: 220816344520.90692
[2025-11-27 19:12:54] 2025-11-27 20:17:54,236 | INFO     | sum of deviations: 2659496639858.5776
[2025-11-27 19:12:54] 2025-11-27 20:17:54,237 | INFO     | mean x: 1764247096.5195968
[2025-11-27 19:12:54] 2025-11-27 20:17:54,237 | INFO     | mean y: 3211163.7099664053
[2025-11-27 19:12:54] 2025-11-27 20:17:54,237 | INFO     | intersect: -21245257717.7676
[2025-11-27 19:12:54] 2025-11-27 20:17:54,238 | INFO     | chi2: 7.273350470278671
[2025-11-27 19:12:54] 2025-11-27 20:17:54,238 | INFO     | current chi2=7.273350470278671 (change=33.05985897696631 %)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,239 | INFO     | sum of square deviations: 217128081999.54916
[2025-11-27 19:12:54] 2025-11-27 20:17:54,267 | INFO     | sum of deviations: 2936038276458.103
[2025-11-27 19:12:54] 2025-11-27 20:17:54,267 | INFO     | mean x: 1764246944.0225224
[2025-11-27 19:12:54] 2025-11-27 20:17:54,267 | INFO     | mean y: 3222586.295045045
[2025-11-27 19:12:54] 2025-11-27 20:17:54,267 | INFO     | intersect: -23853187460.126854
[2025-11-27 19:12:54] 2025-11-27 20:17:54,272 | INFO     | chi2: 4.699250979019722
[2025-11-27 19:12:54] 2025-11-27 20:17:54,272 | INFO     | current chi2=4.699250979019722 (change=35.39083537604265 %)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,273 | INFO     | sum of square deviations: 213481122578.17606
[2025-11-27 19:12:54] 2025-11-27 20:17:54,318 | INFO     | sum of deviations: 2990007037350.109
[2025-11-27 19:12:54] 2025-11-27 20:17:54,319 | INFO     | mean x: 1764246791.5254812
[2025-11-27 19:12:54] 2025-11-27 20:17:54,319 | INFO     | mean y: 3224839.8618346546
[2025-11-27 19:12:54] 2025-11-27 20:17:54,319 | INFO     | intersect: -24706736671.38051
[2025-11-27 19:12:54] 2025-11-27 20:17:54,320 | INFO     | chi2: 4.456527836536868
[2025-11-27 19:12:54] 2025-11-27 20:17:54,320 | INFO     | current chi2=4.456527836536868 (change=5.165145329894413 %)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,320 | INFO     | right removable region: 882
[2025-11-27 19:12:54] 2025-11-27 20:17:54,321 | INFO     | sum of square deviations: 220816061480.90692
[2025-11-27 19:12:54] 2025-11-27 20:17:54,372 | INFO     | sum of deviations: 1940179441098.983
[2025-11-27 19:12:54] 2025-11-27 20:17:54,372 | INFO     | mean x: 1764247401.5195968
[2025-11-27 19:12:54] 2025-11-27 20:17:54,372 | INFO     | mean y: 3211629.829787234
[2025-11-27 19:12:54] 2025-11-27 20:17:54,372 | INFO     | intersect: -15498181314.526274
[2025-11-27 19:12:54] 2025-11-27 20:17:54,373 | INFO     | chi2: 7.465012399396966
[2025-11-27 19:12:54] 2025-11-27 20:17:54,373 | INFO     | current chi2=7.465012399396966 (change=31.295902102297273 %)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,374 | INFO     | sum of square deviations: 217127570514.59363
[2025-11-27 19:12:54] 2025-11-27 20:17:54,414 | INFO     | sum of deviations: 1828201145034.5068
[2025-11-27 19:12:54] 2025-11-27 20:17:54,415 | INFO     | mean x: 1764247554.0213964
[2025-11-27 19:12:54] 2025-11-27 20:17:54,415 | INFO     | mean y: 3216258.8153153155
[2025-11-27 19:12:54] 2025-11-27 20:17:54,415 | INFO     | intersect: -14851642526.469435
[2025-11-27 19:12:54] 2025-11-27 20:17:54,416 | INFO     | chi2: 7.2955329175288774
[2025-11-27 19:12:54] 2025-11-27 20:17:54,416 | INFO     | current chi2=7.2955329175288774 (change=2.270317486435512 %)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,416 | INFO     | left removable region: 20
[2025-11-27 19:12:54] 2025-11-27 20:17:54,417 | INFO     | sum of square deviations: 198608809471.0906
[2025-11-27 19:12:54] 2025-11-27 20:17:54,452 | INFO     | sum of deviations: 2348954452335.2036
[2025-11-27 19:12:54] 2025-11-27 20:17:54,452 | INFO     | mean x: 1764247371.0324826
[2025-11-27 19:12:54] 2025-11-27 20:17:54,452 | INFO     | mean y: 3252226.2784222737
[2025-11-27 19:12:54] 2025-11-27 20:17:54,452 | INFO     | intersect: -20862573052.2858
[2025-11-27 19:12:54] 2025-11-27 20:17:54,453 | INFO     | chi2: 0.7182776463467153
[2025-11-27 19:12:54] 2025-11-27 20:17:54,453 | INFO     | current memory leak: 11.83 B/s (using 862 data points, chi2=0.72)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,454 | INFO     | could have reported an average CPU frequency of 3160 MHz (34 samples)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | ..............................
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . Timing measurements:
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . get job = 0 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . initial setup = 3 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . payload setup = 18 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . stage-in = 0 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . payload execution = 54769 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . stage-out = 4 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | . log creation = 0 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,455 | INFO     | ..............................
[2025-11-27 19:12:54] 2025-11-27 20:17:54,697 | INFO     | 
[2025-11-27 19:12:54] 2025-11-27 20:17:54,701 | INFO     | job summary report
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | --------------------------------------------------
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | PanDA job id: 6898177047
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | task id: 47556173
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | errors: (none)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | pilot state: finished 
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | transexitcode: 0
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | exeerrorcode: 0
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | exeerrordiag: 
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | exitcode: 0
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | exitmsg: OK
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | cpuconsumptiontime: 196413 s
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | nevents: 1000
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | neventsw: 0
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | pid: 1122732
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | pgrp: 1122732
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | corecount: 9
[2025-11-27 19:12:54] 2025-11-27 20:17:54,702 | INFO     | event service: False
[2025-11-27 19:12:54] 2025-11-27 20:17:54,703 | INFO     | sizes: {0: 2284037, 1: 2284292, 12: 2284582, 22: 2284582, 54788: 2336410, 54789: 2336409, 54793: 2345587, 54797: 2345643, 54817: 2345889}
[2025-11-27 19:12:54] 2025-11-27 20:17:54,703 | INFO     | --------------------------------------------------
[2025-11-27 19:12:54] 2025-11-27 20:17:54,703 | INFO     | 
[2025-11-27 19:12:54] 2025-11-27 20:17:54,703 | INFO     | executing command: ls -lF /tmp/boinchome/slots/9
[2025-11-27 19:12:54] 2025-11-27 20:17:54,781 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,781 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,781 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,782 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:12:54] 2025-11-27 20:17:54,783 | INFO     | job 6898177047 has completed (purged errors)
[2025-11-27 19:12:54] 2025-11-27 20:17:54,783 | INFO     | overall cleanup function is called
[2025-11-27 19:12:54] 2025-11-27 20:17:55,860 | INFO     | --- collectZombieJob: --- 10, [1122732]
[2025-11-27 19:12:54] 2025-11-27 20:17:55,860 | INFO     | zombie collector waiting for pid 1122732
[2025-11-27 19:12:54] 2025-11-27 20:17:55,860 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:12:54] 2025-11-27 20:17:55,861 | INFO     | collected zombie processes
[2025-11-27 19:12:54] 2025-11-27 20:17:55,861 | INFO     | will attempt to kill all subprocesses of pid=1122732
[2025-11-27 19:12:54] 2025-11-27 20:17:56,803 | INFO     | process IDs to be killed: [1122732] (in reverse order)
[2025-11-27 19:12:54] 2025-11-27 20:17:57,076 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:12:54] 2025-11-27 20:17:57,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:12:54] 2025-11-27 20:17:57,111 | INFO     | did not find any defunct processes belonging to 1122732
[2025-11-27 19:12:54] 2025-11-27 20:17:57,144 | INFO     | did not find any defunct processes belonging to 1122732
[2025-11-27 19:12:54] 2025-11-27 20:17:57,145 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:12:54] 2025-11-27 20:17:57,145 | INFO     | ready for new job
[2025-11-27 19:12:54] 2025-11-27 20:17:57,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:12:54] 2025-11-27 20:17:57,149 | INFO     | ***************************************
[2025-11-27 19:12:54] 2025-11-27 20:17:57,150 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:12:54] 2025-11-27 20:17:57,150 | INFO     | ***************************************
[2025-11-27 19:12:54] 2025-11-27 20:17:57,150 | INFO     | 
[2025-11-27 19:12:54] 2025-11-27 20:17:57,156 | INFO     | architecture information:
[2025-11-27 19:12:54] 2025-11-27 20:17:57,158 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:12:54] 2025-11-27 20:17:57,180 | INFO     | cat /etc/os-release:
[2025-11-27 19:12:54] NAME="CentOS Linux"
[2025-11-27 19:12:54] VERSION="7 (Core)"
[2025-11-27 19:12:54] ID="centos"
[2025-11-27 19:12:54] ID_LIKE="rhel fedora"
[2025-11-27 19:12:54] VERSION_ID="7"
[2025-11-27 19:12:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:12:54] ANSI_COLOR="0;31"
[2025-11-27 19:12:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:12:54] HOME_URL="https://www.centos.org/"
[2025-11-27 19:12:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:12:54] 
[2025-11-27 19:12:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:12:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:12:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:12:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:12:54] 
[2025-11-27 19:12:54] 2025-11-27 20:17:57,180 | INFO     | ***************************************
[2025-11-27 19:12:54] 2025-11-27 20:17:57,682 | INFO     | executing command: df -mP /tmp/boinchome/slots/9
[2025-11-27 19:12:54] 2025-11-27 20:17:57,701 | INFO     | sufficient remaining disk space (63774392320 B)
[2025-11-27 19:12:54] 2025-11-27 20:17:57,701 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:12:54] 2025-11-27 20:17:57,701 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:12:54] 2025-11-27 20:17:57,701 | INFO     | update_server=False
[2025-11-27 19:12:54] 2025-11-27 20:17:57,702 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:12:54] 2025-11-27 20:17:57,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:12:54] 2025-11-27 20:17:57,705 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:12:54] 2025-11-27 20:17:57,706 | INFO     | aborting loop
[2025-11-27 19:12:54] 2025-11-27 20:17:57,804 | INFO     | all data control threads have been joined
[2025-11-27 19:12:54] 2025-11-27 20:17:58,437 | INFO     | all job control threads have been joined
[2025-11-27 19:12:54] 2025-11-27 20:17:58,604 | INFO     | all payload control threads have been joined
[2025-11-27 19:12:54] 2025-11-27 20:17:58,711 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:58,713 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:58,818 | INFO     | [data] control thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:58,959 | INFO     | [job] validate thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:58,986 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,241 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:12:54] 2025-11-27 20:17:59,278 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,443 | INFO     | [job] control thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,449 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,545 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,626 | INFO     | [payload] control thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,658 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,716 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:17:59,731 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:12:54] 2025-11-27 20:17:59,909 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:18:00,737 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:18:03,271 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:12:54] 2025-11-27 20:18:16,096 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:12:54] 2025-11-27 20:18:17,547 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518102861632)>', '<ExcThread(monitor, started 140517606143744)>']
[2025-11-27 19:12:54] 2025-11-27 20:18:22,576 | INFO     | all workflow threads have been joined
[2025-11-27 19:12:54] 2025-11-27 20:18:22,577 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:12:54] 2025-11-27 20:18:22,577 | INFO     | traces error code: 0
[2025-11-27 19:12:54] 2025-11-27 20:18:22,577 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:12:54] 2025-11-27 20:18:27,737 | INFO     | PID=1097043 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:12:54] 2025-11-27 20:18:27,737 | INFO     | .. there are 82 such processes running
[2025-11-27 19:12:54] 2025-11-27 20:18:27,738 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:12:54] 2025-11-27 20:18:27,738 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:12:54] 2025-11-27 20:18:27,738 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:12:54] 2025-11-27 20:18:27,738 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:12:54] 2025-11-27 20:18:27,738 | INFO     | [monitor] control thread has ended
[2025-11-27 19:12:54] 2025-11-27 20:18:28,057 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:12:54] 2025-11-27 20:18:28,060 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:12:54] 2025-11-27 20:18:28,082 [wrapper] pilotpid: 1097043
[2025-11-27 19:12:54] 2025-11-27 20:18:28,090 [wrapper] Pilot exit status: 0
[2025-11-27 19:12:54] 2025-11-27 20:18:28,160 [wrapper] pandaids: 6898177047
[2025-11-27 19:12:54] 2025-11-27 20:18:28,343 [wrapper] cleanup supervisor_pilot 2814455 1097044
[2025-11-27 19:12:54] 2025-11-27 20:18:28,351 [wrapper] Test setup, not cleaning
[2025-11-27 19:12:54] 2025-11-27 20:18:28,367 [wrapper] apfmon messages muted
[2025-11-27 19:12:54] 2025-11-27 20:18:28,370 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:12:54] 2025-11-27 20:18:28,373 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:12:54]  *** Error codes and diagnostics ***
[2025-11-27 19:12:54]     "exeErrorCode": 0,
[2025-11-27 19:12:54]     "exeErrorDiag": "",
[2025-11-27 19:12:54]     "pilotErrorCode": 0,
[2025-11-27 19:12:54]     "pilotErrorDiag": "",
[2025-11-27 19:12:54]  *** Listing of results directory ***
[2025-11-27 19:12:54] total 1327128
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 19:12:54] -rwx------. 1 boincer umatlas     36292 Nov 25 23:03 runpilot2-wrapper.sh
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:03 queuedata.json
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:12:54] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 19:12:54] -rw-r--r--. 2 boincer umatlas 412277866 Nov 27 00:03 EVNT.47483658._003170.pool.root.1
[2025-11-27 19:12:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 19:12:54] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 19:12:54] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 00:03 input.tar.gz
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 19:12:54] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas       530 Nov 27 15:01 boinc_task_state.xml
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas 923901429 Nov 27 15:16 HITS.47556173._001270.pool.root.1
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas      1071 Nov 27 15:17 memory_monitor_summary.json
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas   1516240 Nov 27 15:17 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas   2186511 Nov 27 15:17 log.47556173._001270.job.log.tgz.1
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas      8633 Nov 27 15:17 heartbeat.json
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas        95 Nov 27 15:18 pilot_heartbeat.json
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas       823 Nov 27 15:18 pilotlog.txt
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas   7254297 Nov 27 15:18 log.47556173._001270.job.log.1
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas       353 Nov 27 15:18 output.list
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas       620 Nov 27 15:18 runtime_log
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas   9461760 Nov 27 15:18 result.tar.gz
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 15:18 runtime_log.err
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas       664 Nov 27 15:18 QYsLDmovLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZtJKDmCjHqNm.diag
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 19:10 init_data.xml
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas        27 Nov 27 19:12 wrapper_checkpoint.txt
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:12 boinc_mmap_file
[2025-11-27 19:12:54] -rw-r--r--. 1 boincer umatlas     21150 Nov 27 19:12 stderr.txt
[2025-11-27 19:12:54] HITS file was successfully produced:
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas 923901429 Nov 27 15:16 shared/HITS.pool.root.1
[2025-11-27 19:12:54]  *** Contents of shared directory: ***
[2025-11-27 19:12:54] total 1314708
[2025-11-27 19:12:54] -rw-r--r--. 2 boincer umatlas 412277866 Nov 27 00:03 ATLAS.root_0
[2025-11-27 19:12:54] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 19:12:54] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 00:03 input.tar.gz
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas 923901429 Nov 27 15:16 HITS.pool.root.1
[2025-11-27 19:12:54] -rw-------. 1 boincer umatlas   9461760 Nov 27 15:18 result.tar.gz
19:12:55 (1082565): run_atlas exited; CPU time 197993.704935
19:12:55 (1082565): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN