Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:10 (1879105): wrapper (7.7.26015): starting
00:05:10 (1879105): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:05:10] Arguments: --nthreads 12
[2025-11-27 00:05:10] Threads: 12
[2025-11-27 00:05:10] Checking for CVMFS
[2025-11-27 00:05:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:05:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:05:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:05:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:05:11] 2.13.2.0 6491 37500 241384 153347 2 784 24884465 40960000 24892 16776704 0 161692723 99.574 169151478 40392 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:05:11] CVMFS is ok
[2025-11-27 00:05:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:05:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:05:11] Further information can be found at the LHC@home message board.
[2025-11-27 00:05:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:05:11] Checking for apptainer binary...
[2025-11-27 00:05:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:05:11] Running /usr/bin/apptainer --version
[2025-11-27 00:05:11] apptainer version 1.4.4-1.el9
[2025-11-27 00:05:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:05:11] c-212-20.aglt2.org
[2025-11-27 00:05:11] apptainer works
[2025-11-27 00:05:11] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:05:11] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:05:11] Starting ATLAS job with PandaID=6898176683
[2025-11-27 00:05:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:09:14]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:09:14] 2025-11-28 02:08:28,436 | INFO     | time since job start (75768s) is within the limit (172800.0s)
[2025-11-27 21:09:14] 2025-11-28 02:08:29,521 | INFO     | monitor loop #4358: job 0:6898176683 is in state 'finished'
[2025-11-27 21:09:14] 2025-11-28 02:08:29,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:09:14] 2025-11-28 02:08:30,443 | INFO     | time since job start (75770s) is within the limit (172800.0s)
[2025-11-27 21:09:14] 2025-11-28 02:08:32,029 | INFO     | monitor loop #4359: job 0:6898176683 is in state 'finished'
[2025-11-27 21:09:14] 2025-11-28 02:08:32,029 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:09:14] 2025-11-28 02:08:32,450 | INFO     | time since job start (75772s) is within the limit (172800.0s)
[2025-11-27 21:09:14] 2025-11-28 02:08:34,469 | INFO     | time since job start (75774s) is within the limit (172800.0s)
[2025-11-27 21:09:14] 2025-11-28 02:08:34,536 | INFO     | monitor loop #4360: job 0:6898176683 is in state 'finished'
[2025-11-27 21:09:14] 2025-11-28 02:08:34,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:09:14] 2025-11-28 02:08:36,476 | INFO     | time since job start (75776s) is within the limit (172800.0s)
[2025-11-27 21:09:14] 2025-11-28 02:08:36,483 | INFO     | 75779s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 21:09:14] 2025-11-28 02:08:37,041 | INFO     | monitor loop #4361: job 0:6898176683 is in state 'finished'
[2025-11-27 21:09:14] 2025-11-28 02:08:37,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:09:14] 2025-11-28 02:08:38,490 | INFO     | time since job start (75778s) is within the limit (172800.0s)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 21:09:14] 2025-11-28 02:08:39,095 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3136.1184374999993
[2025-11-27 21:09:14] 2025-11-28 02:08:39,110 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6898176683/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,111 | INFO     | extracted standard info from prmon json
[2025-11-27 21:09:14] 2025-11-28 02:08:39,112 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:09:14] 2025-11-28 02:08:39,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:09:14] 2025-11-28 02:08:39,192 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:09:14] 2025-11-28 02:08:39,205 | INFO     | sum of square deviations: 592648137421.8389
[2025-11-27 21:09:14] 2025-11-28 02:08:39,318 | INFO     | sum of deviations: 3589200401284.947
[2025-11-27 21:09:14] 2025-11-28 02:08:39,318 | INFO     | mean x: 1764257824.800967
[2025-11-27 21:09:14] 2025-11-28 02:08:39,318 | INFO     | mean y: 3468931.8742949236
[2025-11-27 21:09:14] 2025-11-28 02:08:39,318 | INFO     | intersect: -10681243451.248426
[2025-11-27 21:09:14] 2025-11-28 02:08:39,320 | INFO     | chi2: 16.544632213870063
[2025-11-27 21:09:14] 2025-11-28 02:08:39,321 | INFO     | sum of square deviations: 585514341125.5547
[2025-11-27 21:09:14] 2025-11-28 02:08:39,389 | INFO     | sum of deviations: 4114759128830.822
[2025-11-27 21:09:14] 2025-11-28 02:08:39,390 | INFO     | mean x: 1764257672.3082523
[2025-11-27 21:09:14] 2025-11-28 02:08:39,390 | INFO     | mean y: 3480167.800970874
[2025-11-27 21:09:14] 2025-11-28 02:08:39,390 | INFO     | intersect: -12395012666.354067
[2025-11-27 21:09:14] 2025-11-28 02:08:39,391 | INFO     | chi2: 12.910266868411956
[2025-11-27 21:09:14] 2025-11-28 02:08:39,391 | INFO     | current chi2=12.910266868411956 (change=21.967036187188647 %)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,391 | INFO     | right removable region: 1235
[2025-11-27 21:09:14] 2025-11-28 02:08:39,396 | INFO     | sum of square deviations: 585513204396.3983
[2025-11-27 21:09:14] 2025-11-28 02:08:39,481 | INFO     | sum of deviations: 3188674581304.9126
[2025-11-27 21:09:14] 2025-11-28 02:08:39,481 | INFO     | mean x: 1764257977.3058252
[2025-11-27 21:09:14] 2025-11-28 02:08:39,481 | INFO     | mean y: 3477483.2621359224
[2025-11-27 21:09:14] 2025-11-28 02:08:39,482 | INFO     | intersect: -9604580071.817162
[2025-11-27 21:09:14] 2025-11-28 02:08:39,500 | INFO     | chi2: 14.403300567194151
[2025-11-27 21:09:14] 2025-11-28 02:08:39,500 | INFO     | current chi2=14.403300567194151 (change=12.942757620690676 %)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,500 | INFO     | left removable region: 10
[2025-11-27 21:09:14] 2025-11-28 02:08:39,501 | INFO     | sum of square deviations: 570020049773.6733
[2025-11-27 21:09:14] 2025-11-28 02:08:39,575 | INFO     | monitor loop #4362: job 0:6898176683 is in state 'finished'
[2025-11-27 21:09:14] 2025-11-28 02:08:39,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,603 | INFO     | sum of deviations: 3671746894828.8306
[2025-11-27 21:09:14] 2025-11-28 02:08:39,603 | INFO     | mean x: 1764257946.8163266
[2025-11-27 21:09:14] 2025-11-28 02:08:39,604 | INFO     | mean y: 3494708.648163265
[2025-11-27 21:09:14] 2025-11-28 02:08:39,604 | INFO     | intersect: -11360857546.104967
[2025-11-27 21:09:14] 2025-11-28 02:08:39,619 | INFO     | chi2: 9.76143991797274
[2025-11-27 21:09:14] 2025-11-28 02:08:39,619 | INFO     | current memory leak: 6.44 B/s (using 1225 data points, chi2=9.76)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,620 | INFO     | could have reported an average CPU frequency of 3144 MHz (45 samples)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | ..............................
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . Timing measurements:
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . get job = 0 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . initial setup = 3 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . payload setup = 17 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . stage-in = 0 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . payload execution = 75703 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . stage-out = 6 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | . log creation = 1 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,621 | INFO     | ..............................
[2025-11-27 21:09:14] 2025-11-28 02:08:39,799 | INFO     | 
[2025-11-27 21:09:14] 2025-11-28 02:08:39,799 | INFO     | job summary report
[2025-11-27 21:09:14] 2025-11-28 02:08:39,799 | INFO     | --------------------------------------------------
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | PanDA job id: 6898176683
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | task id: 47556173
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | errors: (none)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | pilot state: finished 
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | transexitcode: 0
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | exeerrorcode: 0
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | exeerrordiag: 
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | exitcode: 0
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | exitmsg: OK
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | cpuconsumptiontime: 203840 s
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | nevents: 1000
[2025-11-27 21:09:14] 2025-11-28 02:08:39,800 | INFO     | neventsw: 0
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | pid: 1921519
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | pgrp: 1921519
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | corecount: 12
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | event service: False
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | sizes: {0: 2283430, 1: 2284115, 2: 2284314, 13: 2284314, 14: 2284632, 24: 2284660, 75722: 2344604, 75723: 2344603, 75730: 2353709, 75745: 2353899}
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | --------------------------------------------------
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | 
[2025-11-27 21:09:14] 2025-11-28 02:08:39,801 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 21:09:14] 2025-11-28 02:08:39,898 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,898 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,899 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,900 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,900 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,900 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,900 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:09:14] 2025-11-28 02:08:39,900 | INFO     | job 6898176683 has completed (purged errors)
[2025-11-27 21:09:14] 2025-11-28 02:08:39,900 | INFO     | overall cleanup function is called
[2025-11-27 21:09:14] 2025-11-28 02:08:40,921 | INFO     | --- collectZombieJob: --- 10, [1921519]
[2025-11-27 21:09:14] 2025-11-28 02:08:40,921 | INFO     | zombie collector waiting for pid 1921519
[2025-11-27 21:09:14] 2025-11-28 02:08:40,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:09:14] 2025-11-28 02:08:40,921 | INFO     | collected zombie processes
[2025-11-27 21:09:14] 2025-11-28 02:08:40,921 | INFO     | will attempt to kill all subprocesses of pid=1921519
[2025-11-27 21:09:14] 2025-11-28 02:08:42,320 | INFO     | process IDs to be killed: [1921519] (in reverse order)
[2025-11-27 21:09:14] 2025-11-28 02:08:42,589 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:09:14] 2025-11-28 02:08:42,590 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:09:14] 2025-11-28 02:08:42,620 | INFO     | did not find any defunct processes belonging to 1921519
[2025-11-27 21:09:14] 2025-11-28 02:08:42,642 | INFO     | did not find any defunct processes belonging to 1921519
[2025-11-27 21:09:14] 2025-11-28 02:08:42,647 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:09:14] 2025-11-28 02:08:42,647 | INFO     | ready for new job
[2025-11-27 21:09:14] 2025-11-28 02:08:42,648 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:09:14] 2025-11-28 02:08:42,657 | INFO     | ***************************************
[2025-11-27 21:09:14] 2025-11-28 02:08:42,657 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:09:14] 2025-11-28 02:08:42,657 | INFO     | ***************************************
[2025-11-27 21:09:14] 2025-11-28 02:08:42,657 | INFO     | 
[2025-11-27 21:09:14] 2025-11-28 02:08:42,666 | INFO     | architecture information:
[2025-11-27 21:09:14] 2025-11-28 02:08:42,669 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:09:14] 2025-11-28 02:08:42,733 | INFO     | cat /etc/os-release:
[2025-11-27 21:09:14] NAME="CentOS Linux"
[2025-11-27 21:09:14] VERSION="7 (Core)"
[2025-11-27 21:09:14] ID="centos"
[2025-11-27 21:09:14] ID_LIKE="rhel fedora"
[2025-11-27 21:09:14] VERSION_ID="7"
[2025-11-27 21:09:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:09:14] ANSI_COLOR="0;31"
[2025-11-27 21:09:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:09:14] HOME_URL="https://www.centos.org/"
[2025-11-27 21:09:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:09:14] 
[2025-11-27 21:09:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:09:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:09:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:09:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:09:14] 
[2025-11-27 21:09:14] 2025-11-28 02:08:42,733 | INFO     | ***************************************
[2025-11-27 21:09:14] 2025-11-28 02:08:43,237 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 21:09:14] 2025-11-28 02:08:43,294 | INFO     | sufficient remaining disk space (122507231232 B)
[2025-11-27 21:09:14] 2025-11-28 02:08:43,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:09:14] 2025-11-28 02:08:43,295 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:09:15] 2025-11-28 02:08:43,295 | INFO     | update_server=False
[2025-11-27 21:09:15] 2025-11-28 02:08:43,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:09:15] 2025-11-28 02:08:43,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:09:15] 2025-11-28 02:08:43,295 | INFO     | aborting loop
[2025-11-27 21:09:15] 2025-11-28 02:08:43,297 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:09:15] 2025-11-28 02:08:44,081 | INFO     | all data control threads have been joined
[2025-11-27 21:09:15] 2025-11-28 02:08:44,287 | INFO     | all payload control threads have been joined
[2025-11-27 21:09:15] 2025-11-28 02:08:44,300 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,301 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,483 | INFO     | all job control threads have been joined
[2025-11-27 21:09:15] 2025-11-28 02:08:44,563 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:09:15] 2025-11-28 02:08:44,814 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,822 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:09:15] 2025-11-28 02:08:44,841 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,841 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,842 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,907 | INFO     | [job] validate thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:44,948 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,087 | INFO     | [data] control thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,142 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,293 | INFO     | [payload] control thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,309 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,492 | INFO     | [job] control thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,696 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:45,828 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:48,577 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:09:15] 2025-11-28 02:08:55,285 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:09:15] 2025-11-28 02:08:56,028 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140597453006656)>', '<ExcThread(monitor, started 140596811388672)>']
[2025-11-27 21:09:15] 2025-11-28 02:09:01,070 | INFO     | all workflow threads have been joined
[2025-11-27 21:09:15] 2025-11-28 02:09:01,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:09:15] 2025-11-28 02:09:01,070 | INFO     | traces error code: 0
[2025-11-27 21:09:15] 2025-11-28 02:09:01,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:09:15] 2025-11-28 02:09:13,776 | INFO     | PID=1895570 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:09:15] 2025-11-28 02:09:13,777 | INFO     | .. there are 28 such processes running
[2025-11-27 21:09:15] 2025-11-28 02:09:13,781 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:09:15] 2025-11-28 02:09:13,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:09:15] 2025-11-28 02:09:13,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:09:15] 2025-11-28 02:09:13,781 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:09:15] 2025-11-28 02:09:13,781 | INFO     | [monitor] control thread has ended
[2025-11-27 21:09:15] 2025-11-28 02:09:14,123 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:09:15] 2025-11-28 02:09:14,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:09:15] 2025-11-28 02:09:14,140 [wrapper] pilotpid: 1895570
[2025-11-27 21:09:15] 2025-11-28 02:09:14,146 [wrapper] Pilot exit status: 0
[2025-11-27 21:09:15] 2025-11-28 02:09:14,160 [wrapper] pandaids: 6898176683
[2025-11-27 21:09:15] 2025-11-28 02:09:14,258 [wrapper] cleanup supervisor_pilot 2597145 1895573
[2025-11-27 21:09:15] 2025-11-28 02:09:14,260 [wrapper] Test setup, not cleaning
[2025-11-27 21:09:15] 2025-11-28 02:09:14,263 [wrapper] apfmon messages muted
[2025-11-27 21:09:15] 2025-11-28 02:09:14,265 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:09:15] 2025-11-28 02:09:14,268 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:09:15]  *** Error codes and diagnostics ***
[2025-11-27 21:09:15]     "exeErrorCode": 0,
[2025-11-27 21:09:15]     "exeErrorDiag": "",
[2025-11-27 21:09:15]     "pilotErrorCode": 0,
[2025-11-27 21:09:15]     "pilotErrorDiag": "",
[2025-11-27 21:09:15]  *** Listing of results directory ***
[2025-11-27 21:09:15] total 1320224
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 21:09:15] -rwx------. 1 boincer umatlas     36292 Nov 25 23:03 runpilot2-wrapper.sh
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:03 queuedata.json
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:09:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:05 run_atlas
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:05 job.xml
[2025-11-27 21:09:15] -rw-r--r--. 2 boincer umatlas 412277866 Nov 27 00:05 EVNT.47483658._003170.pool.root.1
[2025-11-27 21:09:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 21:09:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:05 shared
[2025-11-27 21:09:15] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:05 input.tar.gz
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:05 boinc_lockfile
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas      2782 Nov 27 00:05 pandaJob.out
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas        57 Nov 27 00:05 setup.sh.local
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 21:09:15] drwx------. 5 boincer umatlas      4096 Nov 27 00:05 pilot3
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas       533 Nov 27 20:46 boinc_task_state.xml
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 21:01 init_data.xml
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas 911593316 Nov 27 21:07 HITS.47556173._001261.pool.root.1
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas      1061 Nov 27 21:08 memory_monitor_summary.json
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:08 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas   2731789 Nov 27 21:08 log.47556173._001261.job.log.tgz.1
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas      8600 Nov 27 21:08 heartbeat.json
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas        95 Nov 27 21:09 pilot_heartbeat.json
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas       823 Nov 27 21:09 pilotlog.txt
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas   9330802 Nov 27 21:09 log.47556173._001261.job.log.1
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:09 wrapper_checkpoint.txt
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas       353 Nov 27 21:09 output.list
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:09 boinc_mmap_file
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:09 runtime_log
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas  12083200 Nov 27 21:09 result.tar.gz
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas      9345 Nov 27 21:09 runtime_log.err
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas       663 Nov 27 21:09 cEiLDmovLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVtJKDm7xgkSn.diag
[2025-11-27 21:09:15] -rw-r--r--. 1 boincer umatlas     16425 Nov 27 21:09 stderr.txt
[2025-11-27 21:09:15] HITS file was successfully produced:
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas 911593316 Nov 27 21:07 shared/HITS.pool.root.1
[2025-11-27 21:09:15]  *** Contents of shared directory: ***
[2025-11-27 21:09:15] total 1305248
[2025-11-27 21:09:15] -rw-r--r--. 2 boincer umatlas 412277866 Nov 27 00:05 ATLAS.root_0
[2025-11-27 21:09:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:05 start_atlas.sh
[2025-11-27 21:09:15] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:05 input.tar.gz
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas 911593316 Nov 27 21:07 HITS.pool.root.1
[2025-11-27 21:09:15] -rw-------. 1 boincer umatlas  12083200 Nov 27 21:09 result.tar.gz
21:09:16 (1879105): run_atlas exited; CPU time 204697.604688
21:09:16 (1879105): called boinc_finish(0)

</stderr_txt>
]]>

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