Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 06:02:34 (26716): vboxwrapper version 26210
2025-11-27 06:02:34 (26716): BOINC client version: 8.2.4
2025-11-27 06:02:35 (26716): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-11-27 06:02:35 (26716): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 06:02:36 (26716): Create VM. (boinc_178377ce5c8c5722, slot#2)
2025-11-27 06:02:38 (26716): Setting Memory Size for VM. (4800MB)
2025-11-27 06:02:39 (26716): Setting CPU Count for VM. (8)
2025-11-27 06:02:40 (26716): Setting Chipset Options for VM.
2025-11-27 06:02:41 (26716): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 06:02:42 (26716): Setting Boot Options for VM.
2025-11-27 06:02:44 (26716): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 06:02:46 (26716): Enabling VM Network Access.
2025-11-27 06:02:48 (26716): Disabling USB Support for VM.
2025-11-27 06:02:49 (26716): Disabling COM Port Support for VM.
2025-11-27 06:02:50 (26716): Disabling LPT Port Support for VM.
2025-11-27 06:02:52 (26716): Disabling Audio Support for VM.
2025-11-27 06:02:53 (26716): Disabling Clipboard Support for VM.
2025-11-27 06:02:54 (26716): Disabling Drag and Drop Support for VM.
2025-11-27 06:02:55 (26716): Adding storage controller(s) to VM.
2025-11-27 06:02:56 (26716): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 06:02:59 (26716): Adding VirtualBox Guest Additions to VM.
2025-11-27 06:03:00 (26716): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 06:03:02 (26716): forwarding host port 57159 to guest port 80
2025-11-27 06:03:03 (26716): Enabling remote desktop for VM.
2025-11-27 06:03:03 (26716): Required extension pack not installed, remote desktop not enabled.
2025-11-27 06:03:03 (26716): Enabling shared directory for VM.
2025-11-27 06:03:05 (26716): Starting VM using VBoxManage interface. (boinc_178377ce5c8c5722, slot#2)
2025-11-27 06:03:25 (26716): Successfully started VM. (PID = '5616')
2025-11-27 06:03:25 (26716): Reporting VM Process ID to BOINC.
2025-11-27 06:03:25 (26716): Guest Log: BIOS: VirtualBox 7.1.4
2025-11-27 06:03:25 (26716): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 06:03:25 (26716): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 06:03:25 (26716): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 06:03:25 (26716): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 06:03:25 (26716): Detected: Web Application Enabled (http://localhost:57159)
2025-11-27 06:03:25 (26716): Preference change detected
2025-11-27 06:03:25 (26716): Setting CPU throttle for VM. (100%)
2025-11-27 06:03:26 (26716): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 06:03:27 (26716): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 06:03:28 (26716): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 06:03:35 (26716): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 06:03:35 (26716): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 06:03:35 (26716): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 06:03:45 (26716): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 06:03:45 (26716): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 06:04:05 (26716): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000108 main     Log opened 2025-11-27T06:04:02.950471000Z
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000188 main     OS Product: Linux
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000214 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000258 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000285 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000286 main     Process ID: 1397
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000286 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 06:04:05 (26716): Guest Log: 00:00:00.000881 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 06:04:05 (26716): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 06:04:05 (26716): Guest Log: [INFO] Mounting shared directory
2025-11-27 06:04:06 (26716): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 06:04:10 (26716): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 06:04:10 (26716): Guest Log: [INFO] Detected branch: prod
2025-11-27 06:04:10 (26716): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 06:04:10 (26716): Guest Log: Copying input files
2025-11-27 06:04:12 (26716): Guest Log: Copied input files into RunAtlas.
2025-11-27 06:04:12 (26716): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 06:04:12 (26716): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 06:04:12 (26716): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 06:04:12 (26716): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 06:04:15 (26716): Guest Log: 00:00:10.018622 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 667 344 000ns (GuestNow=1 764 219 853 293 578 000 ns GuestLast=1 764 223 442 960 922 000 ns fSetTimeLastLoop=true )
2025-11-27 06:04:25 (26716): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 06:04:30 (26716): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 06:04:30 (26716): Guest Log: 2.6.3.0 1674 0 32028 153347 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 06:04:33 (26716): Guest Log: copied the webapp to /var/www
2025-11-27 06:04:33 (26716): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-27 06:04:33 (26716): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-27 06:04:33 (26716): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 06:04:33 (26716): Guest Log:  *** Starting ATLAS job. (PandaID=6897661781 taskID=47556161) ***
2025-11-27 07:43:54 (26716): Status Report: Elapsed Time: '6000.017662'
2025-11-27 07:43:54 (26716): Status Report: CPU Time: '40225.218750'
2025-11-27 09:24:25 (26716): Status Report: Elapsed Time: '12000.017662'
2025-11-27 09:24:25 (26716): Status Report: CPU Time: '83059.468750'
2025-11-27 11:04:58 (26716): Status Report: Elapsed Time: '18000.017662'
2025-11-27 11:04:58 (26716): Status Report: CPU Time: '125980.234375'
2025-11-27 12:45:31 (26716): Status Report: Elapsed Time: '24000.017662'
2025-11-27 12:45:31 (26716): Status Report: CPU Time: '170103.515625'
2025-11-27 14:27:10 (26716): Status Report: Elapsed Time: '30000.017662'
2025-11-27 14:27:10 (26716): Status Report: CPU Time: '216574.468750'
2025-11-27 15:52:15 (26716): Guest Log:  *** Job finished ***
2025-11-27 15:52:15 (26716): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:26,543 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:26,543 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:52,555 | INFO     | [monitor] cgroup control has ended
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:54,350 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140251469305664)>', '<ExcThread(monitor, started 140250814871296)>']
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:55,114 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:55,114 | INFO     | [monitor] control thread has ended
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,371 | INFO     | all workflow threads have been joined
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,372 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,372 | INFO     | traces error code: 0
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,776 [wrapper] ==== pilot stdout END ====
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,781 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,786 [wrapper] pilotpid: 6090
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,791 [wrapper] Pilot exit status: 0
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,832 [wrapper] pandaids: 6897661781
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,863 [wrapper] cleanup supervisor_pilot 18321 6091
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,869 [wrapper] Test setup, not cleaning
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,874 [wrapper] apfmon messages muted
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,879 [wrapper] ==== wrapper stdout END ====
2025-11-27 15:52:15 (26716): Guest Log: 2025-11-27 14:51:59,884 [wrapper] ==== wrapper stderr END ====
2025-11-27 15:52:15 (26716): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 15:52:15 (26716): Guest Log:     "exeErrorCode": 0,
2025-11-27 15:52:15 (26716): Guest Log:     "exeErrorDiag": "",
2025-11-27 15:52:15 (26716): Guest Log:     "pilotErrorCode": 0,
2025-11-27 15:52:15 (26716): Guest Log:     "pilotErrorDiag": "",
2025-11-27 15:52:15 (26716): Guest Log:  *** Listing of results directory ***
2025-11-27 15:52:15 (26716): Guest Log: total 921500
2025-11-27 15:52:15 (26716): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 16:48 pilot3.tar.gz
2025-11-27 15:52:15 (26716): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 17:01 runpilot2-wrapper.sh
2025-11-27 15:52:15 (26716): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 17:02 queuedata.json
2025-11-27 15:52:15 (26716): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 05:04 start_atlas.sh
2025-11-27 15:52:15 (26716): Guest Log: -rwxr-xr-x. 1 atlas atlas    590105 Nov 27 05:04 input.tar.gz
2025-11-27 15:52:15 (26716): Guest Log: -rwxr-xr-x. 1 atlas atlas      8758 Nov 27 05:04 init_data.xml
2025-11-27 15:52:15 (26716): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 05:04 EVNT.47483658._002315.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 15:52:15 (26716): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 27 05:04 pandaJob.out
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas    991570 Nov 27 05:05 agis_schedconf.cvmfs.json
2025-11-27 15:52:15 (26716): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 05:05 pilot3
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas 926839026 Nov 27 14:50 HITS.47556161._002989.pool.root.1
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas      1039 Nov 27 14:50 memory_monitor_summary.json
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 14:50 agis_ddmendpoints.agis.ALL.json
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas   1832414 Nov 27 14:50 log.47556161._002989.job.log.tgz.1
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas      8603 Nov 27 14:50 heartbeat.json
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 14:51 pilot_heartbeat.json
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 27 14:51 pilotlog.txt
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas   4628597 Nov 27 14:51 log.47556161._002989.job.log.1
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 14:51 output.list
2025-11-27 15:52:15 (26716): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 14:52 runtime_log
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas   6481920 Nov 27 14:52 result.tar.gz
2025-11-27 15:52:15 (26716): Guest Log: -rw-r--r--. 1 atlas atlas      8725 Nov 27 14:52 runtime_log.err
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas       657 Nov 27 14:52 k1xKDmXbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm5hJKDmY59yhm.diag
2025-11-27 15:52:15 (26716): Guest Log: Looking for outputfile HITS.47556161._002989.pool.root.1
2025-11-27 15:52:15 (26716): Guest Log: HITS file was successfully produced
2025-11-27 15:52:15 (26716): Guest Log: -rw-------. 1 atlas atlas 926839026 Nov 27 14:50 /home/atlas/RunAtlas/HITS.47556161._002989.pool.root.1
2025-11-27 15:52:21 (26716): Guest Log: Successfully finished the ATLAS job!
2025-11-27 15:52:21 (26716): Guest Log: Copying the results back to the shared directory!
2025-11-27 15:52:21 (26716): Guest Log:  *** Contents of shared directory: ***
2025-11-27 15:52:21 (26716): Guest Log: total 1313328
2025-11-27 15:52:21 (26716): Guest Log: -rwxrwxrwx. 1 root root 410896287 Nov 27 05:02 ATLAS.root_0
2025-11-27 15:52:21 (26716): Guest Log: -rwxrwxrwx. 1 root root 926839026 Nov 27  2025 HITS.pool.root.1
2025-11-27 15:52:21 (26716): Guest Log: -rwxrwxrwx. 1 root root      8758 Nov 27 05:02 init_data.xml
2025-11-27 15:52:21 (26716): Guest Log: -rwxrwxrwx. 1 root root    590105 Nov 27 05:01 input.tar.gz
2025-11-27 15:52:21 (26716): Guest Log: -rwxrwxrwx. 1 root root   6481920 Nov 27  2025 result.tar.gz
2025-11-27 15:52:21 (26716): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 27 05:01 start_atlas.sh
2025-11-27 15:52:21 (26716): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 15:52:21 (26716): VM Completion File Detected.
2025-11-27 15:52:21 (26716): Powering off VM.
2025-11-27 15:52:22 (26716): Successfully stopped VM.
2025-11-27 15:52:22 (26716): Deregistering VM. (boinc_178377ce5c8c5722, slot#2)
2025-11-27 15:52:22 (26716): Removing network bandwidth throttle group from VM.
2025-11-27 15:52:23 (26716): Removing VM from VirtualBox.
2025-11-27 15:52:28 (26716): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN