Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:13:53 (3883635): wrapper (7.7.26015): starting
00:13:53 (3883635): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:13:53] Arguments: --nthreads 8
[2025-11-27 00:13:53] Threads: 8
[2025-11-27 00:13:53] Checking for CVMFS
[2025-11-27 00:13:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:13:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:13:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:13:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:13:56] 2.13.3.0 11250 31055 325420 153348 1 73 30741989 32935936 19209 16776704 0 99207300 99.484 132573276 39544 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:13:56] CVMFS is ok
[2025-11-27 00:13:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:13:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:13:56] Further information can be found at the LHC@home message board.
[2025-11-27 00:13:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:13:56] Checking for apptainer binary...
[2025-11-27 00:13:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:13:56] Running /usr/bin/apptainer --version
[2025-11-27 00:13:56] apptainer version 1.4.4-1.el9
[2025-11-27 00:13:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:13:56] c6-2-29-1.aglt2.org
[2025-11-27 00:13:56] apptainer works
[2025-11-27 00:13:57] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:13:57] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:13:57] Starting ATLAS job with PandaID=6898176669
[2025-11-27 00:13:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 06:14:46]  *** The last 200 lines of the pilot log: ***
[2025-11-28 06:14:46] 2025-11-28 11:13:55,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 06:14:46] 2025-11-28 11:13:55,701 | INFO     | fitting pss+swap vs Time
[2025-11-28 06:14:46] 2025-11-28 11:13:55,703 | INFO     | sum of square deviations: 1707863005066.856
[2025-11-28 06:14:46] 2025-11-28 11:13:55,753 | INFO     | sum of deviations: 9829862387007.186
[2025-11-28 06:14:46] 2025-11-28 11:13:55,753 | INFO     | mean x: 1764274559.101359
[2025-11-28 06:14:46] 2025-11-28 11:13:55,753 | INFO     | mean y: 2840852.55209513
[2025-11-28 06:14:46] 2025-11-28 11:13:55,753 | INFO     | intersect: -10151706717.957075
[2025-11-28 06:14:46] 2025-11-28 11:13:55,755 | INFO     | chi2: 14.082000741773978
[2025-11-28 06:14:46] 2025-11-28 11:13:55,757 | INFO     | sum of square deviations: 1693398787076.5005
[2025-11-28 06:14:46] 2025-11-28 11:13:55,807 | INFO     | sum of deviations: 10362014982178.865
[2025-11-28 06:14:46] 2025-11-28 11:13:55,807 | INFO     | mean x: 1764274406.6059058
[2025-11-28 06:14:46] 2025-11-28 11:13:55,807 | INFO     | mean y: 2846460.839863714
[2025-11-28 06:14:46] 2025-11-28 11:13:55,808 | INFO     | intersect: -10792860949.27726
[2025-11-28 06:14:46] 2025-11-28 11:13:55,809 | INFO     | chi2: 11.345083596409925
[2025-11-28 06:14:46] 2025-11-28 11:13:55,810 | INFO     | current chi2=11.345083596409925 (change=19.43557023999468 %)
[2025-11-28 06:14:46] 2025-11-28 11:13:55,810 | INFO     | right removable region: 1760
[2025-11-28 06:14:46] 2025-11-28 11:13:55,812 | INFO     | sum of square deviations: 1693397061996.4985
[2025-11-28 06:14:46] 2025-11-28 11:13:55,866 | INFO     | sum of deviations: 9102737140758.336
[2025-11-28 06:14:46] 2025-11-28 11:13:55,867 | INFO     | mean x: 1764274711.6059058
[2025-11-28 06:14:46] 2025-11-28 11:13:55,867 | INFO     | mean y: 2848517.641680863
[2025-11-28 06:14:46] 2025-11-28 11:13:55,867 | INFO     | intersect: -9480886457.604773
[2025-11-28 06:14:46] 2025-11-28 11:13:55,869 | INFO     | chi2: 9.497274620070646
[2025-11-28 06:14:46] 2025-11-28 11:13:55,869 | INFO     | current chi2=9.497274620070646 (change=32.557348957544306 %)
[2025-11-28 06:14:46] 2025-11-28 11:13:55,871 | INFO     | sum of square deviations: 1679013027438.5686
[2025-11-28 06:14:46] 2025-11-28 11:13:55,922 | INFO     | sum of deviations: 8480342955799.569
[2025-11-28 06:14:46] 2025-11-28 11:13:55,922 | INFO     | mean x: 1764274864.1104784
[2025-11-28 06:14:46] 2025-11-28 11:13:55,922 | INFO     | mean y: 2855116.512528474
[2025-11-28 06:14:46] 2025-11-28 11:13:55,922 | INFO     | intersect: -8908127509.26162
[2025-11-28 06:14:46] 2025-11-28 11:13:55,924 | INFO     | chi2: 6.2886189210512775
[2025-11-28 06:14:46] 2025-11-28 11:13:55,924 | INFO     | current chi2=6.2886189210512775 (change=33.785015463683635 %)
[2025-11-28 06:14:46] 2025-11-28 11:13:55,926 | INFO     | sum of square deviations: 1664710668830.56
[2025-11-28 06:14:46] 2025-11-28 11:13:55,943 | INFO     | time since job start (107911s) is within the limit (172800.0s)
[2025-11-28 06:14:46] 2025-11-28 11:13:55,976 | INFO     | sum of deviations: 7946546177408.293
[2025-11-28 06:14:46] 2025-11-28 11:13:55,977 | INFO     | mean x: 1764275016.615077
[2025-11-28 06:14:46] 2025-11-28 11:13:55,977 | INFO     | mean y: 2860806.852084523
[2025-11-28 06:14:46] 2025-11-28 11:13:55,977 | INFO     | intersect: -8418958763.168636
[2025-11-28 06:14:46] 2025-11-28 11:13:55,978 | INFO     | chi2: 3.984117025660665
[2025-11-28 06:14:46] 2025-11-28 11:13:55,979 | INFO     | current chi2=3.984117025660665 (change=36.6455961845016 %)
[2025-11-28 06:14:46] 2025-11-28 11:13:55,980 | INFO     | sum of square deviations: 1650490287184.1646
[2025-11-28 06:14:46] 2025-11-28 11:13:56,024 | INFO     | sum of deviations: 7697995424436.832
[2025-11-28 06:14:46] 2025-11-28 11:13:56,024 | INFO     | mean x: 1764275169.1168385
[2025-11-28 06:14:46] 2025-11-28 11:13:56,024 | INFO     | mean y: 2863470.461626575
[2025-11-28 06:14:46] 2025-11-28 11:13:56,024 | INFO     | intersect: -8225832138.816749
[2025-11-28 06:14:46] 2025-11-28 11:13:56,026 | INFO     | chi2: 3.5030432891672487
[2025-11-28 06:14:46] 2025-11-28 11:13:56,026 | INFO     | current chi2=3.5030432891672487 (change=12.074789304504488 %)
[2025-11-28 06:14:46] 2025-11-28 11:13:56,026 | INFO     | left removable region: 40
[2025-11-28 06:14:46] 2025-11-28 11:13:56,028 | INFO     | sum of square deviations: 1577854464692.7856
[2025-11-28 06:14:46] 2025-11-28 11:13:56,074 | INFO     | sum of deviations: 7855381877664.104
[2025-11-28 06:14:46] 2025-11-28 11:13:56,074 | INFO     | mean x: 1764275596.102907
[2025-11-28 06:14:46] 2025-11-28 11:13:56,074 | INFO     | mean y: 2874352.0162790697
[2025-11-28 06:14:46] 2025-11-28 11:13:56,075 | INFO     | intersect: -8780609077.509155
[2025-11-28 06:14:46] 2025-11-28 11:13:56,076 | INFO     | chi2: 0.5033343507608714
[2025-11-28 06:14:46] 2025-11-28 11:13:56,076 | INFO     | current memory leak: 4.98 B/s (using 1720 data points, chi2=0.50)
[2025-11-28 06:14:46] 2025-11-28 11:13:56,078 | INFO     | could have reported an average CPU frequency of 2790 MHz (62 samples)
[2025-11-28 06:14:46] 2025-11-28 11:13:56,078 | INFO     | ..............................
[2025-11-28 06:14:46] 2025-11-28 11:13:56,078 | INFO     | . Timing measurements:
[2025-11-28 06:14:46] 2025-11-28 11:13:56,078 | INFO     | . get job = 0 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,078 | INFO     | . initial setup = 6 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,079 | INFO     | . payload setup = 62 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,079 | INFO     | . stage-in = 0 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,079 | INFO     | . payload execution = 107743 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,079 | INFO     | . stage-out = 3 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,080 | INFO     | . log creation = 0 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,080 | INFO     | ..............................
[2025-11-28 06:14:46] 2025-11-28 11:13:56,326 | INFO     | 
[2025-11-28 06:14:46] 2025-11-28 11:13:56,326 | INFO     | job summary report
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | --------------------------------------------------
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | PanDA job id: 6898176669
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | task id: 47556161
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | errors: (none)
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | pilot state: finished 
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | transexitcode: 0
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | exeerrorcode: 0
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | exeerrordiag: 
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | exitcode: 0
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | exitmsg: OK
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | cpuconsumptiontime: 251733 s
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | nevents: 1000
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | neventsw: 0
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | pid: 3914268
[2025-11-28 06:14:46] 2025-11-28 11:13:56,327 | INFO     | pgrp: 3914268
[2025-11-28 06:14:46] 2025-11-28 11:13:56,328 | INFO     | corecount: 8
[2025-11-28 06:14:46] 2025-11-28 11:13:56,328 | INFO     | event service: False
[2025-11-28 06:14:46] 2025-11-28 11:13:56,328 | INFO     | sizes: {0: 2283436, 1: 2284037, 2: 2284121, 3: 2284149, 4: 2284348, 5: 2284376, 6: 2284560, 17: 2284588, 28: 2284616, 39: 2284644, 44: 2284934, 50: 2285242, 107809
[2025-11-28 06:14:46] 2025-11-28 11:13:56,328 | INFO     | --------------------------------------------------
[2025-11-28 06:14:46] 2025-11-28 11:13:56,328 | INFO     | 
[2025-11-28 06:14:46] 2025-11-28 11:13:56,328 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,352 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 06:14:46] 2025-11-28 11:13:56,354 | INFO     | job 6898176669 has completed (purged errors)
[2025-11-28 06:14:46] 2025-11-28 11:13:56,354 | INFO     | overall cleanup function is called
[2025-11-28 06:14:46] 2025-11-28 11:13:57,369 | INFO     | --- collectZombieJob: --- 10, [3914268]
[2025-11-28 06:14:46] 2025-11-28 11:13:57,369 | INFO     | zombie collector waiting for pid 3914268
[2025-11-28 06:14:46] 2025-11-28 11:13:57,369 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 06:14:46] 2025-11-28 11:13:57,369 | INFO     | collected zombie processes
[2025-11-28 06:14:46] 2025-11-28 11:13:57,370 | INFO     | will attempt to kill all subprocesses of pid=3914268
[2025-11-28 06:14:46] 2025-11-28 11:13:57,686 | INFO     | process IDs to be killed: [3914268] (in reverse order)
[2025-11-28 06:14:46] 2025-11-28 11:13:57,788 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 06:14:46] 2025-11-28 11:13:57,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 06:14:46] 2025-11-28 11:13:57,802 | INFO     | did not find any defunct processes belonging to 3914268
[2025-11-28 06:14:46] 2025-11-28 11:13:57,815 | INFO     | did not find any defunct processes belonging to 3914268
[2025-11-28 06:14:46] 2025-11-28 11:13:57,816 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 06:14:46] 2025-11-28 11:13:57,817 | INFO     | ready for new job
[2025-11-28 06:14:46] 2025-11-28 11:13:57,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 06:14:46] 2025-11-28 11:13:57,824 | INFO     | ***************************************
[2025-11-28 06:14:46] 2025-11-28 11:13:57,824 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 06:14:46] 2025-11-28 11:13:57,824 | INFO     | ***************************************
[2025-11-28 06:14:46] 2025-11-28 11:13:57,824 | INFO     | 
[2025-11-28 06:14:46] 2025-11-28 11:13:57,827 | INFO     | architecture information:
[2025-11-28 06:14:46] 2025-11-28 11:13:57,828 | INFO     | executing command: cat /etc/os-release
[2025-11-28 06:14:46] 2025-11-28 11:13:57,842 | INFO     | cat /etc/os-release:
[2025-11-28 06:14:46] NAME="CentOS Linux"
[2025-11-28 06:14:46] VERSION="7 (Core)"
[2025-11-28 06:14:46] ID="centos"
[2025-11-28 06:14:46] ID_LIKE="rhel fedora"
[2025-11-28 06:14:46] VERSION_ID="7"
[2025-11-28 06:14:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 06:14:46] ANSI_COLOR="0;31"
[2025-11-28 06:14:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 06:14:46] HOME_URL="https://www.centos.org/"
[2025-11-28 06:14:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 06:14:46] 
[2025-11-28 06:14:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 06:14:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 06:14:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 06:14:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 06:14:46] 
[2025-11-28 06:14:46] 2025-11-28 11:13:57,843 | INFO     | ***************************************
[2025-11-28 06:14:46] 2025-11-28 11:13:58,345 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-28 06:14:46] 2025-11-28 11:13:58,367 | INFO     | sufficient remaining disk space (72721891328 B)
[2025-11-28 06:14:46] 2025-11-28 11:13:58,367 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 06:14:46] 2025-11-28 11:13:58,367 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 06:14:46] 2025-11-28 11:13:58,367 | INFO     | update_server=False
[2025-11-28 06:14:46] 2025-11-28 11:13:58,368 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 06:14:46] 2025-11-28 11:13:58,396 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:14:46] 2025-11-28 11:13:58,396 | INFO     | aborting loop
[2025-11-28 06:14:46] 2025-11-28 11:13:59,069 | INFO     | all payload control threads have been joined
[2025-11-28 06:14:46] 2025-11-28 11:13:59,114 | INFO     | all data control threads have been joined
[2025-11-28 06:14:46] 2025-11-28 11:13:59,184 | INFO     | all job control threads have been joined
[2025-11-28 06:14:46] 2025-11-28 11:13:59,372 | INFO     | [job] retrieve thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:13:59,398 | INFO     | [job] job monitor thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:13:59,685 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:13:59,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 06:14:46] 2025-11-28 11:13:59,909 | INFO     | [job] validate thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,073 | INFO     | [payload] control thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,088 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,091 | INFO     | [data] copytool_in thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,120 | INFO     | [data] control thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,174 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,190 | INFO     | [job] control thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,536 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 06:14:46] 2025-11-28 11:14:00,673 | INFO     | [payload] validate_post thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,849 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:00,941 | INFO     | [payload] failed_post thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:01,176 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 06:14:46] 2025-11-28 11:14:01,795 | INFO     | [data] copytool_out thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:02,181 | INFO     | [job] queue monitor thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:04,542 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 06:14:46] 2025-11-28 11:14:29,398 | INFO     | PID=3891536 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 06:14:46] 2025-11-28 11:14:29,398 | INFO     | .. there are 17 such processes running
[2025-11-28 06:14:46] 2025-11-28 11:14:29,399 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 06:14:46] 2025-11-28 11:14:29,399 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 06:14:46] 2025-11-28 11:14:29,399 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 06:14:46] 2025-11-28 11:14:38,910 | INFO     | [monitor] cgroup control has ended
[2025-11-28 06:14:46] 2025-11-28 11:14:40,817 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663823259456)>', '<ExcThread(monitor, started 140663165269760)>']
[2025-11-28 06:14:46] 2025-11-28 11:14:41,459 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 06:14:46] 2025-11-28 11:14:41,459 | INFO     | [monitor] control thread has ended
[2025-11-28 06:14:46] 2025-11-28 11:14:45,840 | INFO     | all workflow threads have been joined
[2025-11-28 06:14:46] 2025-11-28 11:14:45,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 06:14:46] 2025-11-28 11:14:45,840 | INFO     | traces error code: 0
[2025-11-28 06:14:46] 2025-11-28 11:14:45,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 06:14:46] 2025-11-28 11:14:46,033 [wrapper] ==== pilot stdout END ====
[2025-11-28 06:14:46] 2025-11-28 11:14:46,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 06:14:46] 2025-11-28 11:14:46,044 [wrapper] pilotpid: 3891536
[2025-11-28 06:14:46] 2025-11-28 11:14:46,048 [wrapper] Pilot exit status: 0
[2025-11-28 06:14:46] 2025-11-28 11:14:46,060 [wrapper] pandaids: 6898176669
[2025-11-28 06:14:46] 2025-11-28 11:14:46,127 [wrapper] cleanup supervisor_pilot 4188301 3891537
[2025-11-28 06:14:46] 2025-11-28 11:14:46,131 [wrapper] Test setup, not cleaning
[2025-11-28 06:14:46] 2025-11-28 11:14:46,135 [wrapper] apfmon messages muted
[2025-11-28 06:14:46] 2025-11-28 11:14:46,139 [wrapper] ==== wrapper stdout END ====
[2025-11-28 06:14:46] 2025-11-28 11:14:46,143 [wrapper] ==== wrapper stderr END ====
[2025-11-28 06:14:46]  *** Error codes and diagnostics ***
[2025-11-28 06:14:46]     "exeErrorCode": 0,
[2025-11-28 06:14:46]     "exeErrorDiag": "",
[2025-11-28 06:14:46]     "pilotErrorCode": 0,
[2025-11-28 06:14:46]     "pilotErrorDiag": "",
[2025-11-28 06:14:46]  *** Listing of results directory ***
[2025-11-28 06:14:46] total 1334028
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:57 queuedata.json
[2025-11-28 06:14:46] -rwx------. 1 boincer umatlas     36292 Nov 25 23:00 runpilot2-wrapper.sh
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 06:14:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:13 run_atlas
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:13 job.xml
[2025-11-28 06:14:46] -rw-r--r--. 2 boincer umatlas 411636083 Nov 27 00:13 EVNT.47483658._002464.pool.root.1
[2025-11-28 06:14:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:13 start_atlas.sh
[2025-11-28 06:14:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:13 shared
[2025-11-28 06:14:46] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:13 input.tar.gz
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:13 boinc_lockfile
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:13 pandaJob.out
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas        57 Nov 27 00:13 setup.sh.local
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas    991570 Nov 27 00:15 agis_schedconf.cvmfs.json
[2025-11-28 06:14:46] drwx------. 5 boincer umatlas      4096 Nov 27 00:15 pilot3
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas       533 Nov 28 06:01 boinc_task_state.xml
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas      6845 Nov 28 06:10 init_data.xml
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas 917196907 Nov 28 06:13 HITS.47556161._004465.pool.root.1
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas      1059 Nov 28 06:13 memory_monitor_summary.json
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas   1516240 Nov 28 06:13 agis_ddmendpoints.agis.ALL.json
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas   2723953 Nov 28 06:13 log.47556161._004465.job.log.tgz.1
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas      8617 Nov 28 06:13 heartbeat.json
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas        95 Nov 28 06:14 pilot_heartbeat.json
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas        29 Nov 28 06:14 wrapper_checkpoint.txt
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 06:14 boinc_mmap_file
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas      4824 Nov 28 06:14 pilotlog.txt
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas  13920406 Nov 28 06:14 log.47556161._004465.job.log.1
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas       353 Nov 28 06:14 output.list
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas       620 Nov 28 06:14 runtime_log
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas  16660480 Nov 28 06:14 result.tar.gz
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas      9349 Nov 28 06:14 runtime_log.err
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas       664 Nov 28 06:14 E93MDmssLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCuMKDmAoa85n.diag
[2025-11-28 06:14:46] -rw-r--r--. 1 boincer umatlas     21186 Nov 28 06:14 stderr.txt
[2025-11-28 06:14:46] HITS file was successfully produced:
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas 917196907 Nov 28 06:13 shared/HITS.pool.root.1
[2025-11-28 06:14:46]  *** Contents of shared directory: ***
[2025-11-28 06:14:46] total 1314568
[2025-11-28 06:14:46] -rw-r--r--. 2 boincer umatlas 411636083 Nov 27 00:13 ATLAS.root_0
[2025-11-28 06:14:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:13 start_atlas.sh
[2025-11-28 06:14:46] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:13 input.tar.gz
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas 917196907 Nov 28 06:13 HITS.pool.root.1
[2025-11-28 06:14:46] -rw-------. 1 boincer umatlas  16660480 Nov 28 06:14 result.tar.gz
06:14:47 (3883635): run_atlas exited; CPU time 254481.017078
06:14:47 (3883635): called boinc_finish(0)

</stderr_txt>
]]>

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