Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:48 (3798381): wrapper (7.7.26015): starting
00:03:48 (3798381): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:03:48] Arguments: --nthreads 8
[2025-11-27 00:03:48] Threads: 8
[2025-11-27 00:03:48] Checking for CVMFS
[2025-11-27 00:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:51] 2.13.2.0 14352 35363 225656 153347 0 523 35917230 40960001 26151 16776704 0 275882482 99.679 222611868 48624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:03:51] CVMFS is ok
[2025-11-27 00:03:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:51] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:51] Checking for apptainer binary...
[2025-11-27 00:03:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:51] Running /usr/bin/apptainer --version
[2025-11-27 00:03:51] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:51] c-208-36.aglt2.org
[2025-11-27 00:03:51] apptainer works
[2025-11-27 00:03:51] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:03:51] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:03:51] Starting ATLAS job with PandaID=6898178291
[2025-11-27 00:03:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:43:29]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:43:29] 2025-11-27 22:42:53,387 | INFO     | monitor loop #3939: job 0:6898178291 is in state 'finished'
[2025-11-27 17:43:29] 2025-11-27 22:42:53,387 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,070 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 17:43:29] 2025-11-27 22:42:54,075 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3795.574257812499
[2025-11-27 17:43:29] 2025-11-27 22:42:54,088 | INFO     | using path: /tmp/boinchome/slots/13/PanDA_Pilot-6898178291/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,088 | INFO     | extracted standard info from prmon json
[2025-11-27 17:43:29] 2025-11-27 22:42:54,088 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:43:29] 2025-11-27 22:42:54,088 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:43:29] 2025-11-27 22:42:54,097 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:43:29] 2025-11-27 22:42:54,097 | INFO     | sum of square deviations: 345781788739.9422
[2025-11-27 17:43:29] 2025-11-27 22:42:54,110 | INFO     | sum of deviations: 3024189173338.819
[2025-11-27 17:43:29] 2025-11-27 22:42:54,110 | INFO     | mean x: 1764251748.1282547
[2025-11-27 17:43:29] 2025-11-27 22:42:54,110 | INFO     | mean y: 2856746.5351976855
[2025-11-27 17:43:29] 2025-11-27 22:42:54,110 | INFO     | intersect: -15427195412.013435
[2025-11-27 17:43:29] 2025-11-27 22:42:54,110 | INFO     | chi2: 11.72277216149282
[2025-11-27 17:43:29] 2025-11-27 22:42:54,111 | INFO     | sum of square deviations: 340804415043.54645
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | sum of deviations: 3315284352187.9663
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | mean x: 1764251595.6337209
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | mean y: 2865656.5872093025
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | intersect: -17159458099.047728
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | chi2: 9.202981809863507
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | current chi2=9.202981809863507 (change=21.494833448238182 %)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,124 | INFO     | right removable region: 1031
[2025-11-27 17:43:29] 2025-11-27 22:42:54,125 | INFO     | sum of square deviations: 340803701343.5467
[2025-11-27 17:43:29] 2025-11-27 22:42:54,137 | INFO     | sum of deviations: 2601107478057.2847
[2025-11-27 17:43:29] 2025-11-27 22:42:54,137 | INFO     | mean x: 1764251900.6337209
[2025-11-27 17:43:29] 2025-11-27 22:42:54,137 | INFO     | mean y: 2869705.5377906975
[2025-11-27 17:43:29] 2025-11-27 22:42:54,137 | INFO     | intersect: -13462385495.106892
[2025-11-27 17:43:29] 2025-11-27 22:42:54,138 | INFO     | chi2: 7.238364262924199
[2025-11-27 17:43:29] 2025-11-27 22:42:54,138 | INFO     | current chi2=7.238364262924199 (change=38.253817755659256 %)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,139 | INFO     | sum of square deviations: 335873614847.08844
[2025-11-27 17:43:29] 2025-11-27 22:42:54,151 | INFO     | sum of deviations: 2231869470212.5303
[2025-11-27 17:43:29] 2025-11-27 22:42:54,151 | INFO     | mean x: 1764252053.1392405
[2025-11-27 17:43:29] 2025-11-27 22:42:54,151 | INFO     | mean y: 2881128.1431353455
[2025-11-27 17:43:29] 2025-11-27 22:42:54,151 | INFO     | intersect: -11720517558.454765
[2025-11-27 17:43:29] 2025-11-27 22:42:54,151 | INFO     | chi2: 3.97548058127643
[2025-11-27 17:43:29] 2025-11-27 22:42:54,151 | INFO     | current chi2=3.97548058127643 (change=45.07763858142184 %)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,152 | INFO     | sum of square deviations: 330991421494.6429
[2025-11-27 17:43:29] 2025-11-27 22:42:54,164 | INFO     | sum of deviations: 2036071522569.9307
[2025-11-27 17:43:29] 2025-11-27 22:42:54,164 | INFO     | mean x: 1764252205.642857
[2025-11-27 17:43:29] 2025-11-27 22:42:54,164 | INFO     | mean y: 2887238.161448141
[2025-11-27 17:43:29] 2025-11-27 22:42:54,164 | INFO     | intersect: -10849791838.29235
[2025-11-27 17:43:29] 2025-11-27 22:42:54,165 | INFO     | chi2: 3.057656499456886
[2025-11-27 17:43:29] 2025-11-27 22:42:54,165 | INFO     | current chi2=3.057656499456886 (change=23.0871227529642 %)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,165 | INFO     | left removable region: 30
[2025-11-27 17:43:29] 2025-11-27 22:42:54,165 | INFO     | sum of square deviations: 311004970078.06195
[2025-11-27 17:43:29] 2025-11-27 22:42:54,177 | INFO     | sum of deviations: 2128154538446.149
[2025-11-27 17:43:29] 2025-11-27 22:42:54,177 | INFO     | mean x: 1764252480.133866
[2025-11-27 17:43:29] 2025-11-27 22:42:54,177 | INFO     | mean y: 2904352.6033966034
[2025-11-27 17:43:29] 2025-11-27 22:42:54,177 | INFO     | intersect: -12069577709.723001
[2025-11-27 17:43:29] 2025-11-27 22:42:54,177 | INFO     | chi2: 0.2213464336797592
[2025-11-27 17:43:29] 2025-11-27 22:42:54,177 | INFO     | current memory leak: 6.84 B/s (using 1001 data points, chi2=0.22)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,178 | INFO     | could have reported an average CPU frequency of 3777 MHz (38 samples)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,178 | INFO     | ..............................
[2025-11-27 17:43:29] 2025-11-27 22:42:54,178 | INFO     | . Timing measurements:
[2025-11-27 17:43:29] 2025-11-27 22:42:54,178 | INFO     | . get job = 0 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,178 | INFO     | . initial setup = 4 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,178 | INFO     | . payload setup = 82 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,179 | INFO     | . stage-in = 0 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,179 | INFO     | . payload execution = 63256 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,179 | INFO     | . stage-out = 2 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,179 | INFO     | . log creation = 0 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,179 | INFO     | ..............................
[2025-11-27 17:43:29] 2025-11-27 22:42:54,213 | INFO     | time since job start (63449s) is within the limit (172800.0s)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | 
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | job summary report
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | --------------------------------------------------
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | PanDA job id: 6898178291
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | task id: 47556161
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | errors: (none)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | pilot state: finished 
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | transexitcode: 0
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | exeerrorcode: 0
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | exeerrordiag: 
[2025-11-27 17:43:29] 2025-11-27 22:42:54,227 | INFO     | exitcode: 0
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | exitmsg: OK
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | cpuconsumptiontime: 142241 s
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | nevents: 1000
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | neventsw: 0
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | pid: 3916500
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | pgrp: 3916500
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | corecount: 8
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | event service: False
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | sizes: {0: 2284094, 1: 2284122, 2: 2284321, 13: 2284321, 23: 2284377, 34: 2284405, 42: 2284823, 45: 2284879, 63342: 2339700, 63343: 2339699, 63346: 2349087, 63351:
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | --------------------------------------------------
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | 
[2025-11-27 17:43:29] 2025-11-27 22:42:54,228 | INFO     | executing command: ls -lF /tmp/boinchome/slots/13
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | job 6898178291 has completed (purged errors)
[2025-11-27 17:43:29] 2025-11-27 22:42:54,248 | INFO     | overall cleanup function is called
[2025-11-27 17:43:29] 2025-11-27 22:42:55,261 | INFO     | --- collectZombieJob: --- 10, [3916500]
[2025-11-27 17:43:29] 2025-11-27 22:42:55,262 | INFO     | zombie collector waiting for pid 3916500
[2025-11-27 17:43:29] 2025-11-27 22:42:55,262 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:43:29] 2025-11-27 22:42:55,262 | INFO     | collected zombie processes
[2025-11-27 17:43:29] 2025-11-27 22:42:55,262 | INFO     | will attempt to kill all subprocesses of pid=3916500
[2025-11-27 17:43:29] 2025-11-27 22:42:55,591 | INFO     | process IDs to be killed: [3916500] (in reverse order)
[2025-11-27 17:43:29] 2025-11-27 22:42:55,730 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:43:29] 2025-11-27 22:42:55,732 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:43:29] 2025-11-27 22:42:55,753 | INFO     | did not find any defunct processes belonging to 3916500
[2025-11-27 17:43:29] 2025-11-27 22:42:55,773 | INFO     | did not find any defunct processes belonging to 3916500
[2025-11-27 17:43:29] 2025-11-27 22:42:55,774 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:43:29] 2025-11-27 22:42:55,774 | INFO     | ready for new job
[2025-11-27 17:43:29] 2025-11-27 22:42:55,774 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:43:29] 2025-11-27 22:42:55,777 | INFO     | ***************************************
[2025-11-27 17:43:29] 2025-11-27 22:42:55,777 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:43:29] 2025-11-27 22:42:55,777 | INFO     | ***************************************
[2025-11-27 17:43:29] 2025-11-27 22:42:55,777 | INFO     | 
[2025-11-27 17:43:29] 2025-11-27 22:42:55,782 | INFO     | architecture information:
[2025-11-27 17:43:29] 2025-11-27 22:42:55,782 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:43:29] 2025-11-27 22:42:55,796 | INFO     | cat /etc/os-release:
[2025-11-27 17:43:29] NAME="CentOS Linux"
[2025-11-27 17:43:29] VERSION="7 (Core)"
[2025-11-27 17:43:29] ID="centos"
[2025-11-27 17:43:29] ID_LIKE="rhel fedora"
[2025-11-27 17:43:29] VERSION_ID="7"
[2025-11-27 17:43:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:43:29] ANSI_COLOR="0;31"
[2025-11-27 17:43:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:43:29] HOME_URL="https://www.centos.org/"
[2025-11-27 17:43:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:43:29] 
[2025-11-27 17:43:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:43:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:43:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:43:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:43:29] 
[2025-11-27 17:43:29] 2025-11-27 22:42:55,796 | INFO     | ***************************************
[2025-11-27 17:43:29] 2025-11-27 22:42:56,299 | INFO     | executing command: df -mP /tmp/boinchome/slots/13
[2025-11-27 17:43:29] 2025-11-27 22:42:56,313 | INFO     | sufficient remaining disk space (162277621760 B)
[2025-11-27 17:43:29] 2025-11-27 22:42:56,313 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:43:29] 2025-11-27 22:42:56,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:43:29] 2025-11-27 22:42:56,314 | INFO     | update_server=False
[2025-11-27 17:43:29] 2025-11-27 22:42:56,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:43:29] 2025-11-27 22:42:56,332 | INFO     | all data control threads have been joined
[2025-11-27 17:43:29] 2025-11-27 22:42:56,574 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:43:29] 2025-11-27 22:42:56,835 | INFO     | all job control threads have been joined
[2025-11-27 17:43:29] 2025-11-27 22:42:56,895 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:43:29] 2025-11-27 22:42:56,895 | INFO     | aborting loop
[2025-11-27 17:43:29] 2025-11-27 22:42:57,319 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:57,337 | INFO     | [data] control thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:57,422 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:57,661 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:57,721 | INFO     | all payload control threads have been joined
[2025-11-27 17:43:29] 2025-11-27 22:42:57,840 | INFO     | [job] control thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:57,901 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,349 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,402 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,499 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,580 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,604 | INFO     | [job] validate thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,726 | INFO     | [payload] control thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:58,761 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:42:59,128 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:43:29] 2025-11-27 22:42:59,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:43:29] 2025-11-27 22:43:00,245 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:43:03,133 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:43:29] 2025-11-27 22:43:15,452 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:43:29] 2025-11-27 22:43:17,045 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174271506240)>', '<ExcThread(monitor, started 140173614499584)>']
[2025-11-27 17:43:29] 2025-11-27 22:43:22,071 | INFO     | all workflow threads have been joined
[2025-11-27 17:43:29] 2025-11-27 22:43:22,071 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:43:29] 2025-11-27 22:43:22,071 | INFO     | traces error code: 0
[2025-11-27 17:43:29] 2025-11-27 22:43:22,071 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:43:29] 2025-11-27 22:43:27,993 | INFO     | PID=3835498 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:43:29] 2025-11-27 22:43:27,993 | INFO     | .. there are 29 such processes running
[2025-11-27 17:43:29] 2025-11-27 22:43:27,993 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:43:29] 2025-11-27 22:43:27,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:43:29] 2025-11-27 22:43:27,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:43:29] 2025-11-27 22:43:27,994 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:43:29] 2025-11-27 22:43:27,994 | INFO     | [monitor] control thread has ended
[2025-11-27 17:43:29] 2025-11-27 22:43:28,223 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:43:29] 2025-11-27 22:43:28,279 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:43:29] 2025-11-27 22:43:28,291 [wrapper] pilotpid: 3835498
[2025-11-27 17:43:29] 2025-11-27 22:43:28,330 [wrapper] Pilot exit status: 0
[2025-11-27 17:43:29] 2025-11-27 22:43:28,423 [wrapper] pandaids: 6898178291
[2025-11-27 17:43:29] 2025-11-27 22:43:28,656 [wrapper] cleanup supervisor_pilot 1444882 3835501
[2025-11-27 17:43:29] 2025-11-27 22:43:28,702 [wrapper] Test setup, not cleaning
[2025-11-27 17:43:29] 2025-11-27 22:43:28,727 [wrapper] apfmon messages muted
[2025-11-27 17:43:29] 2025-11-27 22:43:28,767 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:43:29] 2025-11-27 22:43:28,811 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:43:29]  *** Error codes and diagnostics ***
[2025-11-27 17:43:29]     "exeErrorCode": 0,
[2025-11-27 17:43:29]     "exeErrorDiag": "",
[2025-11-27 17:43:29]     "pilotErrorCode": 0,
[2025-11-27 17:43:29]     "pilotErrorDiag": "",
[2025-11-27 17:43:29]  *** Listing of results directory ***
[2025-11-27 17:43:29] total 1328920
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 23:06 queuedata.json
[2025-11-27 17:43:29] -rwx------. 1 boincer umatlas     36292 Nov 25 23:06 runpilot2-wrapper.sh
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:43:29] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 17:43:29] -rw-r--r--. 2 boincer umatlas 410973647 Nov 27 00:03 EVNT.47483658._002473.pool.root.1
[2025-11-27 17:43:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 17:43:29] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 17:43:29] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 00:03 input.tar.gz
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas      2077 Nov 27 00:03 stderr.txt
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 17:43:29] drwx------. 5 boincer umatlas      4096 Nov 27 00:05 pilot3
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:35 boinc_task_state.xml
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 17:39 init_data.xml
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas 925213683 Nov 27 17:42 HITS.47556161._004555.pool.root.1
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas      1077 Nov 27 17:42 memory_monitor_summary.json
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas   2172274 Nov 27 17:42 log.47556161._004555.job.log.tgz.1
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas      8635 Nov 27 17:42 heartbeat.json
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:43 boinc_mmap_file
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:43 wrapper_checkpoint.txt
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas        95 Nov 27 17:43 pilot_heartbeat.json
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas       823 Nov 27 17:43 pilotlog.txt
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas   8190121 Nov 27 17:43 log.47556161._004555.job.log.1
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas       353 Nov 27 17:43 output.list
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:43 runtime_log
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas  10383360 Nov 27 17:43 result.tar.gz
[2025-11-27 17:43:29] -rw-r--r--. 1 boincer umatlas      9361 Nov 27 17:43 runtime_log.err
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas       666 Nov 27 17:43 osoLDmuyLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmfvMKDmANHFyn.diag
[2025-11-27 17:43:29] HITS file was successfully produced:
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas 925213683 Nov 27 17:42 shared/HITS.pool.root.1
[2025-11-27 17:43:29]  *** Contents of shared directory: ***
[2025-11-27 17:43:29] total 1315620
[2025-11-27 17:43:29] -rw-r--r--. 2 boincer umatlas 410973647 Nov 27 00:03 ATLAS.root_0
[2025-11-27 17:43:29] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 17:43:29] -rw-r--r--. 2 boincer umatlas    590101 Nov 27 00:03 input.tar.gz
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas 925213683 Nov 27 17:42 HITS.pool.root.1
[2025-11-27 17:43:29] -rw-------. 1 boincer umatlas  10383360 Nov 27 17:43 result.tar.gz
17:43:30 (3798381): run_atlas exited; CPU time 143150.409774
17:43:30 (3798381): called boinc_finish(0)

</stderr_txt>
]]>

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