Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:49 (3779616): wrapper (7.7.26015): starting
00:02:49 (3779616): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:02:49] Arguments: --nthreads 8
[2025-11-27 00:02:49] Threads: 8
[2025-11-27 00:02:49] Checking for CVMFS
[2025-11-27 00:02:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:51] 2.13.2.0 14352 35362 225656 153347 1 517 35917230 40960001 25539 16776704 0 275834316 99.679 222611868 48624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:02:51] CVMFS is ok
[2025-11-27 00:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:51] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:51] Checking for apptainer binary...
[2025-11-27 00:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:51] Running /usr/bin/apptainer --version
[2025-11-27 00:02:51] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:51] c-208-36.aglt2.org
[2025-11-27 00:02:51] apptainer works
[2025-11-27 00:02:51] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:02:51] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:02:51] Starting ATLAS job with PandaID=6898175043
[2025-11-27 00:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:40:11]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:40:11] 2025-11-27 22:39:09,609 | INFO     | monitor loop #3866: job 0:6898175043 is in state 'finished'
[2025-11-27 17:40:11] 2025-11-27 22:39:09,609 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,098 | INFO     | time since job start (63309s) is within the limit (172800.0s)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,526 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 17:40:11] 2025-11-27 22:39:11,532 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3784.046101562499
[2025-11-27 17:40:11] 2025-11-27 22:39:11,545 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6898175043/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,546 | INFO     | extracted standard info from prmon json
[2025-11-27 17:40:11] 2025-11-27 22:39:11,546 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:40:11] 2025-11-27 22:39:11,546 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:40:11] 2025-11-27 22:39:11,555 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:40:11] 2025-11-27 22:39:11,556 | INFO     | sum of square deviations: 343781075423.6194
[2025-11-27 17:40:11] 2025-11-27 22:39:11,568 | INFO     | sum of deviations: 2418020173910.7373
[2025-11-27 17:40:11] 2025-11-27 22:39:11,568 | INFO     | mean x: 1764251601.2821257
[2025-11-27 17:40:11] 2025-11-27 22:39:11,568 | INFO     | mean y: 2851897.428985507
[2025-11-27 17:40:11] 2025-11-27 22:39:11,568 | INFO     | intersect: -12406196385.690697
[2025-11-27 17:40:11] 2025-11-27 22:39:11,569 | INFO     | chi2: 15.434396135351193
[2025-11-27 17:40:11] 2025-11-27 22:39:11,569 | INFO     | sum of square deviations: 338822977877.85956
[2025-11-27 17:40:11] 2025-11-27 22:39:11,582 | INFO     | sum of deviations: 2788827112759.3013
[2025-11-27 17:40:11] 2025-11-27 22:39:11,582 | INFO     | mean x: 1764251448.7883496
[2025-11-27 17:40:11] 2025-11-27 22:39:11,582 | INFO     | mean y: 2863301.891262136
[2025-11-27 17:40:11] 2025-11-27 22:39:11,582 | INFO     | intersect: -14518561144.946228
[2025-11-27 17:40:11] 2025-11-27 22:39:11,582 | INFO     | chi2: 11.807083369683687
[2025-11-27 17:40:11] 2025-11-27 22:39:11,583 | INFO     | current chi2=11.807083369683687 (change=23.501488065085034 %)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,583 | INFO     | right removable region: 1029
[2025-11-27 17:40:11] 2025-11-27 22:39:11,583 | INFO     | sum of square deviations: 338822168407.8602
[2025-11-27 17:40:11] 2025-11-27 22:39:11,595 | INFO     | sum of deviations: 2010875147476.468
[2025-11-27 17:40:11] 2025-11-27 22:39:11,595 | INFO     | mean x: 1764251753.7883496
[2025-11-27 17:40:11] 2025-11-27 22:39:11,595 | INFO     | mean y: 2864416.0388349514
[2025-11-27 17:40:11] 2025-11-27 22:39:11,595 | INFO     | intersect: -10467790506.735289
[2025-11-27 17:40:11] 2025-11-27 22:39:11,596 | INFO     | chi2: 11.324376751102852
[2025-11-27 17:40:11] 2025-11-27 22:39:11,596 | INFO     | current chi2=11.324376751102852 (change=26.6289613678807 %)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,596 | INFO     | sum of square deviations: 333911169267.02057
[2025-11-27 17:40:11] 2025-11-27 22:39:11,608 | INFO     | sum of deviations: 1634016444805.2112
[2025-11-27 17:40:11] 2025-11-27 22:39:11,608 | INFO     | mean x: 1764251906.294634
[2025-11-27 17:40:11] 2025-11-27 22:39:11,608 | INFO     | mean y: 2876115.8204878047
[2025-11-27 17:40:11] 2025-11-27 22:39:11,608 | INFO     | intersect: -8630607555.877407
[2025-11-27 17:40:11] 2025-11-27 22:39:11,608 | INFO     | chi2: 7.908467232068607
[2025-11-27 17:40:11] 2025-11-27 22:39:11,608 | INFO     | current chi2=7.908467232068607 (change=30.16421648724799 %)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,609 | INFO     | sum of square deviations: 329048157457.5839
[2025-11-27 17:40:11] 2025-11-27 22:39:11,621 | INFO     | sum of deviations: 1506773073709.6404
[2025-11-27 17:40:11] 2025-11-27 22:39:11,621 | INFO     | mean x: 1764252058.7960784
[2025-11-27 17:40:11] 2025-11-27 22:39:11,621 | INFO     | mean y: 2880101.7098039216
[2025-11-27 17:40:11] 2025-11-27 22:39:11,621 | INFO     | intersect: -8075960144.564486
[2025-11-27 17:40:11] 2025-11-27 22:39:11,622 | INFO     | chi2: 7.524200404851696
[2025-11-27 17:40:11] 2025-11-27 22:39:11,622 | INFO     | current chi2=7.524200404851696 (change=4.8589292455903506 %)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,622 | INFO     | left removable region: 30
[2025-11-27 17:40:11] 2025-11-27 22:39:11,622 | INFO     | sum of square deviations: 309140825480.1217
[2025-11-27 17:40:11] 2025-11-27 22:39:11,634 | INFO     | sum of deviations: 1756040182448.9834
[2025-11-27 17:40:11] 2025-11-27 22:39:11,634 | INFO     | mean x: 1764252333.2862864
[2025-11-27 17:40:11] 2025-11-27 22:39:11,634 | INFO     | mean y: 2900886.7797797797
[2025-11-27 17:40:11] 2025-11-27 22:39:11,634 | INFO     | intersect: -10018738876.970247
[2025-11-27 17:40:11] 2025-11-27 22:39:11,634 | INFO     | chi2: 2.84024423811315
[2025-11-27 17:40:11] 2025-11-27 22:39:11,635 | INFO     | current memory leak: 5.68 B/s (using 999 data points, chi2=2.84)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,635 | INFO     | could have reported an average CPU frequency of 3773 MHz (38 samples)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | ..............................
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . Timing measurements:
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . get job = 0 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . initial setup = 4 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . payload setup = 67 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . stage-in = 0 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . payload execution = 63127 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . stage-out = 5 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | . log creation = 1 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,636 | INFO     | ..............................
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | 
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | job summary report
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | --------------------------------------------------
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | PanDA job id: 6898175043
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | task id: 47556161
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | errors: (none)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | pilot state: finished 
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | transexitcode: 0
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | exeerrorcode: 0
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | exeerrordiag: 
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | exitcode: 0
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | exitmsg: OK
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | cpuconsumptiontime: 140866 s
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | nevents: 1000
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | neventsw: 0
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | pid: 3877343
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | pgrp: 3877343
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | corecount: 8
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | event service: False
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | sizes: {0: 2284094, 1: 2284293, 11: 2284293, 22: 2284321, 33: 2284349, 44: 2284405, 47: 2284823, 54: 2284879, 63195: 2339587, 63200: 2348583, 63202: 2348639, 63207
[2025-11-27 17:40:11] 2025-11-27 22:39:11,690 | INFO     | --------------------------------------------------
[2025-11-27 17:40:11] 2025-11-27 22:39:11,691 | INFO     | 
[2025-11-27 17:40:11] 2025-11-27 22:39:11,691 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | job 6898175043 has completed (purged errors)
[2025-11-27 17:40:11] 2025-11-27 22:39:11,712 | INFO     | overall cleanup function is called
[2025-11-27 17:40:11] 2025-11-27 22:39:12,727 | INFO     | --- collectZombieJob: --- 10, [3877343]
[2025-11-27 17:40:11] 2025-11-27 22:39:12,727 | INFO     | zombie collector waiting for pid 3877343
[2025-11-27 17:40:11] 2025-11-27 22:39:12,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:40:11] 2025-11-27 22:39:12,727 | INFO     | collected zombie processes
[2025-11-27 17:40:11] 2025-11-27 22:39:12,727 | INFO     | will attempt to kill all subprocesses of pid=3877343
[2025-11-27 17:40:11] 2025-11-27 22:39:13,127 | INFO     | process IDs to be killed: [3877343] (in reverse order)
[2025-11-27 17:40:11] 2025-11-27 22:39:13,258 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:40:11] 2025-11-27 22:39:13,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:40:11] 2025-11-27 22:39:13,280 | INFO     | did not find any defunct processes belonging to 3877343
[2025-11-27 17:40:11] 2025-11-27 22:39:13,302 | INFO     | did not find any defunct processes belonging to 3877343
[2025-11-27 17:40:11] 2025-11-27 22:39:13,303 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:40:11] 2025-11-27 22:39:13,303 | INFO     | ready for new job
[2025-11-27 17:40:11] 2025-11-27 22:39:13,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:40:11] 2025-11-27 22:39:13,307 | INFO     | ***************************************
[2025-11-27 17:40:11] 2025-11-27 22:39:13,307 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:40:11] 2025-11-27 22:39:13,307 | INFO     | ***************************************
[2025-11-27 17:40:11] 2025-11-27 22:39:13,307 | INFO     | 
[2025-11-27 17:40:11] 2025-11-27 22:39:13,311 | INFO     | architecture information:
[2025-11-27 17:40:11] 2025-11-27 22:39:13,312 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:40:11] 2025-11-27 22:39:13,330 | INFO     | cat /etc/os-release:
[2025-11-27 17:40:11] NAME="CentOS Linux"
[2025-11-27 17:40:11] VERSION="7 (Core)"
[2025-11-27 17:40:11] ID="centos"
[2025-11-27 17:40:11] ID_LIKE="rhel fedora"
[2025-11-27 17:40:11] VERSION_ID="7"
[2025-11-27 17:40:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:40:11] ANSI_COLOR="0;31"
[2025-11-27 17:40:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:40:11] HOME_URL="https://www.centos.org/"
[2025-11-27 17:40:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:40:11] 
[2025-11-27 17:40:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:40:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:40:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:40:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:40:11] 
[2025-11-27 17:40:11] 2025-11-27 22:39:13,331 | INFO     | ***************************************
[2025-11-27 17:40:11] 2025-11-27 22:39:13,834 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-27 17:40:11] 2025-11-27 22:39:13,851 | INFO     | sufficient remaining disk space (160383893504 B)
[2025-11-27 17:40:11] 2025-11-27 22:39:13,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:40:11] 2025-11-27 22:39:13,852 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:40:11] 2025-11-27 22:39:13,852 | INFO     | update_server=False
[2025-11-27 17:40:11] 2025-11-27 22:39:13,852 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:40:11] 2025-11-27 22:39:13,852 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:40:11] 2025-11-27 22:39:13,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:11] 2025-11-27 22:39:13,853 | INFO     | aborting loop
[2025-11-27 17:40:11] 2025-11-27 22:39:13,906 | INFO     | all payload control threads have been joined
[2025-11-27 17:40:11] 2025-11-27 22:39:14,228 | INFO     | all data control threads have been joined
[2025-11-27 17:40:11] 2025-11-27 22:39:14,858 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:14,859 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:14,910 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:14,912 | INFO     | [payload] control thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:14,956 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:15,001 | INFO     | [job] validate thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:15,023 | INFO     | all job control threads have been joined
[2025-11-27 17:40:11] 2025-11-27 22:39:15,121 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:15,233 | INFO     | [data] control thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:15,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:40:11] 2025-11-27 22:39:15,498 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:15,577 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:15,909 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:16,029 | INFO     | [job] control thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:16,053 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:16,700 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:40:11] 2025-11-27 22:39:17,323 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:17,705 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:17,859 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:40:11] 2025-11-27 22:39:44,635 | INFO     | PID=3801311 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:40:11] 2025-11-27 22:39:44,636 | INFO     | .. there are 29 such processes running
[2025-11-27 17:40:11] 2025-11-27 22:39:44,636 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:40:11] 2025-11-27 22:39:44,636 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:40:11] 2025-11-27 22:39:44,636 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:40:11] 2025-11-27 22:39:53,559 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:40:11] 2025-11-27 22:39:53,700 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139966097450816)>', '<ExcThread(monitor, started 139965816080128)>']
[2025-11-27 17:40:11] 2025-11-27 22:39:54,681 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:40:11] 2025-11-27 22:39:54,681 | INFO     | [monitor] control thread has ended
[2025-11-27 17:40:11] 2025-11-27 22:39:58,725 | INFO     | all workflow threads have been joined
[2025-11-27 17:40:11] 2025-11-27 22:39:58,725 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:40:11] 2025-11-27 22:39:58,725 | INFO     | traces error code: 0
[2025-11-27 17:40:11] 2025-11-27 22:39:58,725 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:40:11] 2025-11-27 22:39:58,833 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:40:11] 2025-11-27 22:39:58,835 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:40:11] 2025-11-27 22:39:58,838 [wrapper] pilotpid: 3801311
[2025-11-27 17:40:11] 2025-11-27 22:39:58,841 [wrapper] Pilot exit status: 0
[2025-11-27 17:40:11] 2025-11-27 22:39:58,859 [wrapper] pandaids: 6898175043
[2025-11-27 17:40:11] 2025-11-27 22:39:58,963 [wrapper] cleanup supervisor_pilot 1440765 3801312
[2025-11-27 17:40:11] 2025-11-27 22:39:58,967 [wrapper] Test setup, not cleaning
[2025-11-27 17:40:11] 2025-11-27 22:39:58,970 [wrapper] apfmon messages muted
[2025-11-27 17:40:11] 2025-11-27 22:39:58,973 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:40:11] 2025-11-27 22:39:58,977 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:40:11]  *** Error codes and diagnostics ***
[2025-11-27 17:40:11]     "exeErrorCode": 0,
[2025-11-27 17:40:11]     "exeErrorDiag": "",
[2025-11-27 17:40:11]     "pilotErrorCode": 0,
[2025-11-27 17:40:11]     "pilotErrorDiag": "",
[2025-11-27 17:40:11]  *** Listing of results directory ***
[2025-11-27 17:40:11] total 1324560
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 17:40:11] -rwx------. 1 boincer umatlas     36292 Nov 25 22:50 runpilot2-wrapper.sh
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:40:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 17:40:11] -rw-r--r--. 2 boincer umatlas 409606297 Nov 27 00:02 EVNT.47483658._002451.pool.root.1
[2025-11-27 17:40:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 17:40:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 17:40:11] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:02 input.tar.gz
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:02 pandaJob.out
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 17:40:11] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:26 boinc_task_state.xml
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas 922277950 Nov 27 17:38 HITS.47556161._004335.pool.root.1
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas      1077 Nov 27 17:38 memory_monitor_summary.json
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas      7175 Nov 27 17:39 init_data.xml
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:39 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas   2167853 Nov 27 17:39 log.47556161._004335.job.log.tgz.1
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas      8634 Nov 27 17:39 heartbeat.json
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas        95 Nov 27 17:39 pilot_heartbeat.json
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas      4826 Nov 27 17:39 pilotlog.txt
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas   8099628 Nov 27 17:39 log.47556161._004335.job.log.1
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas       353 Nov 27 17:39 output.list
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:39 runtime_log
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas  10291200 Nov 27 17:39 result.tar.gz
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas      9361 Nov 27 17:39 runtime_log.err
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas       666 Nov 27 17:39 qFSKDmoiLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWsMKDmrgoBOo.diag
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:40 wrapper_checkpoint.txt
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:40 boinc_mmap_file
[2025-11-27 17:40:11] -rw-r--r--. 1 boincer umatlas     21395 Nov 27 17:40 stderr.txt
[2025-11-27 17:40:11] HITS file was successfully produced:
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas 922277950 Nov 27 17:38 shared/HITS.pool.root.1
[2025-11-27 17:40:11]  *** Contents of shared directory: ***
[2025-11-27 17:40:11] total 1311328
[2025-11-27 17:40:11] -rw-r--r--. 2 boincer umatlas 409606297 Nov 27 00:02 ATLAS.root_0
[2025-11-27 17:40:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 17:40:11] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:02 input.tar.gz
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas 922277950 Nov 27 17:38 HITS.pool.root.1
[2025-11-27 17:40:11] -rw-------. 1 boincer umatlas  10291200 Nov 27 17:39 result.tar.gz
17:40:13 (3779616): run_atlas exited; CPU time 141722.517806
17:40:13 (3779616): called boinc_finish(0)

</stderr_txt>
]]>

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