Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:35 (3680165): wrapper (7.7.26015): starting
00:03:35 (3680165): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:03:35] Arguments: --nthreads 8
[2025-11-27 00:03:35] Threads: 8
[2025-11-27 00:03:35] Checking for CVMFS
[2025-11-27 00:03:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:38] 2.13.3.0 9582 31023 268740 153347 1 907 34095514 40960001 76711 16776704 0 397185815 99.725 273582493 48404 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:38] CVMFS is ok
[2025-11-27 00:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:38] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:38] Checking for apptainer binary...
[2025-11-27 00:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:38] Running /usr/bin/apptainer --version
[2025-11-27 00:03:38] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:38] c8-7-4.aglt2.org
[2025-11-27 00:03:38] apptainer works
[2025-11-27 00:03:39] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:03:39] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:03:39] Starting ATLAS job with PandaID=6898176646
[2025-11-27 00:03:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 10:15:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 10:15:31] 2025-11-27 15:14:35,695 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:15:31] 2025-11-27 15:14:36,923 | INFO     | time since job start (36560s) is within the limit (172800.0s)
[2025-11-27 10:15:31] 2025-11-27 15:14:38,202 | INFO     | monitor loop #2030: job 0:6898176646 is in state 'finished'
[2025-11-27 10:15:31] 2025-11-27 15:14:38,203 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:15:31] 2025-11-27 15:14:40,095 | INFO     | PID=3706485 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:15:31] 2025-11-27 15:14:40,095 | INFO     | .. there are 92 such processes running
[2025-11-27 10:15:31] 2025-11-27 15:14:40,725 | INFO     | monitor loop #2031: job 0:6898176646 is in state 'finished'
[2025-11-27 10:15:31] 2025-11-27 15:14:40,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:15:31] 2025-11-27 15:14:41,096 | INFO     | time since job start (36565s) is within the limit (172800.0s)
[2025-11-27 10:15:31] 2025-11-27 15:14:43,102 | INFO     | time since job start (36567s) is within the limit (172800.0s)
[2025-11-27 10:15:31] 2025-11-27 15:14:43,237 | INFO     | monitor loop #2032: job 0:6898176646 is in state 'finished'
[2025-11-27 10:15:31] 2025-11-27 15:14:43,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:15:31] 2025-11-27 15:14:45,110 | INFO     | time since job start (36569s) is within the limit (172800.0s)
[2025-11-27 10:15:31] 2025-11-27 15:14:45,768 | INFO     | monitor loop #2033: job 0:6898176646 is in state 'finished'
[2025-11-27 10:15:31] 2025-11-27 15:14:45,771 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,180 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 10:15:31] 2025-11-27 15:14:46,191 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.994328125001
[2025-11-27 10:15:31] 2025-11-27 15:14:46,231 | INFO     | using path: /tmp/boinchome/slots/10/PanDA_Pilot-6898176646/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,232 | INFO     | extracted standard info from prmon json
[2025-11-27 10:15:31] 2025-11-27 15:14:46,232 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 10:15:31] 2025-11-27 15:14:46,232 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 10:15:31] 2025-11-27 15:14:46,246 | INFO     | fitting pss+swap vs Time
[2025-11-27 10:15:31] 2025-11-27 15:14:46,246 | INFO     | sum of square deviations: 65317800997.855675
[2025-11-27 10:15:31] 2025-11-27 15:14:46,256 | INFO     | sum of deviations: 777648184152.6311
[2025-11-27 10:15:31] 2025-11-27 15:14:46,256 | INFO     | mean x: 1764238242.1697478
[2025-11-27 10:15:31] 2025-11-27 15:14:46,256 | INFO     | mean y: 2785584.2016806724
[2025-11-27 10:15:31] 2025-11-27 15:14:46,256 | INFO     | intersect: -21001544697.53843
[2025-11-27 10:15:31] 2025-11-27 15:14:46,257 | INFO     | chi2: 20.537470701879858
[2025-11-27 10:15:31] 2025-11-27 15:14:46,257 | INFO     | sum of square deviations: 63685154748.45586
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | sum of deviations: 986881320106.9319
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | mean x: 1764238089.679661
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | mean y: 2805136.052542373
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | intersect: -27336276032.910324
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | chi2: 16.784564744176834
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | current chi2=16.784564744176834 (change=18.273457390054897 %)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,270 | INFO     | right removable region: 589
[2025-11-27 10:15:31] 2025-11-27 15:14:46,271 | INFO     | sum of square deviations: 63684730188.45591
[2025-11-27 10:15:31] 2025-11-27 15:14:46,279 | INFO     | sum of deviations: 538903325353.9669
[2025-11-27 10:15:31] 2025-11-27 15:14:46,279 | INFO     | mean x: 1764238394.679661
[2025-11-27 10:15:31] 2025-11-27 15:14:46,279 | INFO     | mean y: 2807876.8305084747
[2025-11-27 10:15:31] 2025-11-27 15:14:46,279 | INFO     | intersect: -14926264363.82344
[2025-11-27 10:15:31] 2025-11-27 15:14:46,280 | INFO     | chi2: 15.878004685294137
[2025-11-27 10:15:31] 2025-11-27 15:14:46,280 | INFO     | current chi2=15.878004685294137 (change=22.68763317655872 %)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,280 | INFO     | left removable region: 10
[2025-11-27 10:15:31] 2025-11-27 15:14:46,280 | INFO     | sum of square deviations: 60188753591.357346
[2025-11-27 10:15:31] 2025-11-27 15:14:46,288 | INFO     | sum of deviations: 591463734041.595
[2025-11-27 10:15:31] 2025-11-27 15:14:46,292 | INFO     | mean x: 1764238364.2020726
[2025-11-27 10:15:31] 2025-11-27 15:14:46,292 | INFO     | mean y: 2851834.3367875647
[2025-11-27 10:15:31] 2025-11-27 15:14:46,292 | INFO     | intersect: -17333991817.800735
[2025-11-27 10:15:31] 2025-11-27 15:14:46,293 | INFO     | chi2: 7.92616332408394
[2025-11-27 10:15:31] 2025-11-27 15:14:46,293 | INFO     | current memory leak: 9.83 B/s (using 579 data points, chi2=7.93)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,293 | INFO     | could have reported an average CPU frequency of 3799 MHz (23 samples)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | ..............................
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . Timing measurements:
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . get job = 0 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . initial setup = 4 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . payload setup = 67 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . stage-in = 0 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . payload execution = 36349 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . stage-out = 4 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | . log creation = 1 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,294 | INFO     | ..............................
[2025-11-27 10:15:31] 2025-11-27 15:14:46,401 | INFO     | 
[2025-11-27 10:15:31] 2025-11-27 15:14:46,401 | INFO     | job summary report
[2025-11-27 10:15:31] 2025-11-27 15:14:46,401 | INFO     | --------------------------------------------------
[2025-11-27 10:15:31] 2025-11-27 15:14:46,401 | INFO     | PanDA job id: 6898176646
[2025-11-27 10:15:31] 2025-11-27 15:14:46,401 | INFO     | task id: 47556161
[2025-11-27 10:15:31] 2025-11-27 15:14:46,401 | INFO     | errors: (none)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | pilot state: finished 
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | transexitcode: 0
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | exeerrorcode: 0
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | exeerrordiag: 
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | exitcode: 0
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | exitmsg: OK
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | cpuconsumptiontime: 138517 s
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | nevents: 1000
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | neventsw: 0
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | pid: 3757064
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | pgrp: 3757064
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | corecount: 8
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | event service: False
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | sizes: {0: 2284094, 1: 2284293, 2: 2284293, 12: 2284321, 23: 2284349, 34: 2284377, 42: 2284795, 45: 2284851, 36421: 2325870, 36422: 2325869, 36427: 2334921, 36428:
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | --------------------------------------------------
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | 
[2025-11-27 10:15:31] 2025-11-27 15:14:46,402 | INFO     | executing command: ls -lF /tmp/boinchome/slots/10
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,589 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 10:15:31] 2025-11-27 15:14:46,590 | INFO     | job 6898176646 has completed (purged errors)
[2025-11-27 10:15:31] 2025-11-27 15:14:46,590 | INFO     | overall cleanup function is called
[2025-11-27 10:15:31] 2025-11-27 15:14:47,615 | INFO     | --- collectZombieJob: --- 10, [3757064]
[2025-11-27 10:15:31] 2025-11-27 15:14:47,616 | INFO     | zombie collector waiting for pid 3757064
[2025-11-27 10:15:31] 2025-11-27 15:14:47,616 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 10:15:31] 2025-11-27 15:14:47,616 | INFO     | collected zombie processes
[2025-11-27 10:15:31] 2025-11-27 15:14:47,616 | INFO     | will attempt to kill all subprocesses of pid=3757064
[2025-11-27 10:15:31] 2025-11-27 15:14:48,723 | INFO     | process IDs to be killed: [3757064] (in reverse order)
[2025-11-27 10:15:31] 2025-11-27 15:14:49,456 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 10:15:31] 2025-11-27 15:14:49,456 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 10:15:31] 2025-11-27 15:14:49,600 | INFO     | did not find any defunct processes belonging to 3757064
[2025-11-27 10:15:31] 2025-11-27 15:14:49,726 | INFO     | did not find any defunct processes belonging to 3757064
[2025-11-27 10:15:31] 2025-11-27 15:14:49,769 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 10:15:31] 2025-11-27 15:14:49,769 | INFO     | ready for new job
[2025-11-27 10:15:31] 2025-11-27 15:14:49,769 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 10:15:31] 2025-11-27 15:14:49,772 | INFO     | ***************************************
[2025-11-27 10:15:31] 2025-11-27 15:14:49,772 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 10:15:31] 2025-11-27 15:14:49,772 | INFO     | ***************************************
[2025-11-27 10:15:31] 2025-11-27 15:14:49,772 | INFO     | 
[2025-11-27 10:15:31] 2025-11-27 15:14:49,778 | INFO     | architecture information:
[2025-11-27 10:15:31] 2025-11-27 15:14:49,790 | INFO     | executing command: cat /etc/os-release
[2025-11-27 10:15:31] 2025-11-27 15:14:50,013 | INFO     | cat /etc/os-release:
[2025-11-27 10:15:31] NAME="CentOS Linux"
[2025-11-27 10:15:31] VERSION="7 (Core)"
[2025-11-27 10:15:31] ID="centos"
[2025-11-27 10:15:31] ID_LIKE="rhel fedora"
[2025-11-27 10:15:31] VERSION_ID="7"
[2025-11-27 10:15:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 10:15:31] ANSI_COLOR="0;31"
[2025-11-27 10:15:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 10:15:31] HOME_URL="https://www.centos.org/"
[2025-11-27 10:15:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 10:15:31] 
[2025-11-27 10:15:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 10:15:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 10:15:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 10:15:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 10:15:31] 
[2025-11-27 10:15:31] 2025-11-27 15:14:50,013 | INFO     | ***************************************
[2025-11-27 10:15:31] 2025-11-27 15:14:50,517 | INFO     | executing command: df -mP /tmp/boinchome/slots/10
[2025-11-27 10:15:31] 2025-11-27 15:14:50,621 | INFO     | sufficient remaining disk space (161278328832 B)
[2025-11-27 10:15:31] 2025-11-27 15:14:50,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 10:15:31] 2025-11-27 15:14:50,622 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 10:15:31] 2025-11-27 15:14:50,622 | INFO     | update_server=False
[2025-11-27 10:15:31] 2025-11-27 15:14:50,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 10:15:31] 2025-11-27 15:14:50,622 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 10:15:31] 2025-11-27 15:14:50,660 | INFO     | all data control threads have been joined
[2025-11-27 10:15:31] 2025-11-27 15:14:50,809 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 10:15:31] 2025-11-27 15:14:50,810 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 10:15:31] 2025-11-27 15:14:50,810 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:15:31] 2025-11-27 15:14:50,810 | INFO     | will abort loop
[2025-11-27 10:15:31] 2025-11-27 15:14:51,416 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 10:15:31] 2025-11-27 15:14:51,627 | INFO     | [job] retrieve thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,665 | INFO     | [data] control thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,691 | INFO     | all payload control threads have been joined
[2025-11-27 10:15:31] 2025-11-27 15:14:51,744 | INFO     | [job] validate thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,816 | INFO     | [job] job monitor thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,817 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,900 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 10:15:31] 2025-11-27 15:14:51,907 | INFO     | [payload] failed_post thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,973 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,974 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:51,975 | INFO     | [data] copytool_in thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:52,165 | INFO     | all job control threads have been joined
[2025-11-27 10:15:31] 2025-11-27 15:14:52,431 | INFO     | [job] queue monitor thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:52,455 | INFO     | [payload] validate_post thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:52,697 | INFO     | [payload] control thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:52,746 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:53,171 | INFO     | [job] control thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:53,912 | INFO     | [data] copytool_out thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:14:54,638 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 10:15:31] 2025-11-27 15:15:19,929 | INFO     | PID=3706485 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 10:15:31] 2025-11-27 15:15:19,933 | INFO     | .. there are 92 such processes running
[2025-11-27 10:15:31] 2025-11-27 15:15:19,933 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 10:15:31] 2025-11-27 15:15:19,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 10:15:31] 2025-11-27 15:15:19,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 10:15:31] 2025-11-27 15:15:21,579 | INFO     | [monitor] cgroup control has ended
[2025-11-27 10:15:31] 2025-11-27 15:15:22,668 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657189709632)>', '<ExcThread(monitor, started 140656462776064)>']
[2025-11-27 10:15:31] 2025-11-27 15:15:22,951 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 10:15:31] 2025-11-27 15:15:22,952 | INFO     | [monitor] control thread has ended
[2025-11-27 10:15:31] 2025-11-27 15:15:27,695 | INFO     | all workflow threads have been joined
[2025-11-27 10:15:31] 2025-11-27 15:15:27,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 10:15:31] 2025-11-27 15:15:27,695 | INFO     | traces error code: 0
[2025-11-27 10:15:31] 2025-11-27 15:15:27,695 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 10:15:31] 2025-11-27 15:15:28,120 [wrapper] ==== pilot stdout END ====
[2025-11-27 10:15:31] 2025-11-27 15:15:28,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 10:15:31] 2025-11-27 15:15:28,220 [wrapper] pilotpid: 3706485
[2025-11-27 10:15:31] 2025-11-27 15:15:28,265 [wrapper] Pilot exit status: 0
[2025-11-27 10:15:31] 2025-11-27 15:15:28,478 [wrapper] pandaids: 6898176646
[2025-11-27 10:15:31] 2025-11-27 15:15:29,392 [wrapper] cleanup supervisor_pilot  825125 3706486
[2025-11-27 10:15:31] 2025-11-27 15:15:29,464 [wrapper] Test setup, not cleaning
[2025-11-27 10:15:31] 2025-11-27 15:15:29,506 [wrapper] apfmon messages muted
[2025-11-27 10:15:31] 2025-11-27 15:15:29,528 [wrapper] ==== wrapper stdout END ====
[2025-11-27 10:15:31] 2025-11-27 15:15:29,581 [wrapper] ==== wrapper stderr END ====
[2025-11-27 10:15:31]  *** Error codes and diagnostics ***
[2025-11-27 10:15:31]     "exeErrorCode": 0,
[2025-11-27 10:15:31]     "exeErrorDiag": "",
[2025-11-27 10:15:31]     "pilotErrorCode": 0,
[2025-11-27 10:15:31]     "pilotErrorDiag": "",
[2025-11-27 10:15:31]  *** Listing of results directory ***
[2025-11-27 10:15:31] total 1318116
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:57 queuedata.json
[2025-11-27 10:15:31] -rwx------. 1 boincer umatlas     36292 Nov 25 23:00 runpilot2-wrapper.sh
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 10:15:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 10:15:31] -rw-r--r--. 2 boincer umatlas 409801175 Nov 27 00:03 EVNT.47483658._002462.pool.root.1
[2025-11-27 10:15:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 10:15:31] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 00:03 input.tar.gz
[2025-11-27 10:15:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas        57 Nov 27 00:03 setup.sh.local
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas    991570 Nov 27 00:05 agis_schedconf.cvmfs.json
[2025-11-27 10:15:31] drwx------. 5 boincer umatlas      4096 Nov 27 00:05 pilot3
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas       532 Nov 27 09:57 boinc_task_state.xml
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas 923575284 Nov 27 10:13 HITS.47556161._004442.pool.root.1
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas      1061 Nov 27 10:13 memory_monitor_summary.json
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas   1516240 Nov 27 10:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas   1814477 Nov 27 10:13 log.47556161._004442.job.log.tgz.1
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 10:13 init_data.xml
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas      8591 Nov 27 10:14 heartbeat.json
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas        95 Nov 27 10:15 pilot_heartbeat.json
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 10:15 boinc_mmap_file
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas        29 Nov 27 10:15 wrapper_checkpoint.txt
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas      5012 Nov 27 10:15 pilotlog.txt
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas   4410097 Nov 27 10:15 log.47556161._004442.job.log.1
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas       353 Nov 27 10:15 output.list
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas       620 Nov 27 10:15 runtime_log
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas   6246400 Nov 27 10:15 result.tar.gz
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas      9351 Nov 27 10:15 runtime_log.err
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas       660 Nov 27 10:15 lSfMDmssLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrtMKDmHKH4Nm.diag
[2025-11-27 10:15:31] -rw-r--r--. 1 boincer umatlas     21640 Nov 27 10:15 stderr.txt
[2025-11-27 10:15:31] HITS file was successfully produced:
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas 923575284 Nov 27 10:13 shared/HITS.pool.root.1
[2025-11-27 10:15:31]  *** Contents of shared directory: ***
[2025-11-27 10:15:31] total 1308836
[2025-11-27 10:15:31] -rw-r--r--. 2 boincer umatlas 409801175 Nov 27 00:03 ATLAS.root_0
[2025-11-27 10:15:31] -rw-r--r--. 2 boincer umatlas    590100 Nov 27 00:03 input.tar.gz
[2025-11-27 10:15:31] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas 923575284 Nov 27 10:13 HITS.pool.root.1
[2025-11-27 10:15:31] -rw-------. 1 boincer umatlas   6246400 Nov 27 10:15 result.tar.gz
10:15:32 (3680165): run_atlas exited; CPU time 139395.397942
10:15:32 (3680165): called boinc_finish(0)

</stderr_txt>
]]>

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