Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:38 (2084279): wrapper (7.7.26015): starting
00:02:38 (2084279): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:02:38] Arguments: --nthreads 8
[2025-11-27 00:02:38] Threads: 8
[2025-11-27 00:02:38] Checking for CVMFS
[2025-11-27 00:02:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:41] 2.13.3.0 14106 30995 275476 153347 0 754 34485250 40960000 85065 16776704 0 390330796 99.748 256478321 46885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:41] CVMFS is ok
[2025-11-27 00:02:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:41] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:41] Checking for apptainer binary...
[2025-11-27 00:02:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:41] Running /usr/bin/apptainer --version
[2025-11-27 00:02:41] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:42] c8-7-5.aglt2.org
[2025-11-27 00:02:42] apptainer works
[2025-11-27 00:02:43] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:02:43] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:02:43] Starting ATLAS job with PandaID=6898120847
[2025-11-27 00:02:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:48:53]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:48:53] 2025-11-27 13:47:04,985 | INFO     | sum of square deviations: 40889704413.81529
[2025-11-27 08:48:53] 2025-11-27 13:47:04,988 | INFO     | sum of deviations: 730803983570.255
[2025-11-27 08:48:53] 2025-11-27 13:47:04,988 | INFO     | mean x: 1764235662.8585463
[2025-11-27 08:48:53] 2025-11-27 13:47:04,988 | INFO     | mean y: 2775444.0451866407
[2025-11-27 08:48:53] 2025-11-27 13:47:04,988 | INFO     | intersect: -31528644722.88855
[2025-11-27 08:48:53] 2025-11-27 13:47:04,989 | INFO     | chi2: 16.503560924139006
[2025-11-27 08:48:53] 2025-11-27 13:47:04,989 | INFO     | sum of square deviations: 39696742646.37299
[2025-11-27 08:48:53] 2025-11-27 13:47:04,992 | INFO     | sum of deviations: 903728064318.736
[2025-11-27 08:48:53] 2025-11-27 13:47:04,992 | INFO     | mean x: 1764235510.3769841
[2025-11-27 08:48:53] 2025-11-27 13:47:04,992 | INFO     | mean y: 2797558.390873016
[2025-11-27 08:48:53] 2025-11-27 13:47:04,992 | INFO     | intersect: -40161433471.81042
[2025-11-27 08:48:53] 2025-11-27 13:47:04,993 | INFO     | chi2: 13.089694269434956
[2025-11-27 08:48:53] 2025-11-27 13:47:04,993 | INFO     | current chi2=13.089694269434956 (change=20.685636696203805 %)
[2025-11-27 08:48:53] 2025-11-27 13:47:04,993 | INFO     | right removable region: 503
[2025-11-27 08:48:53] 2025-11-27 13:47:04,993 | INFO     | sum of square deviations: 39696165586.37304
[2025-11-27 08:48:53] 2025-11-27 13:47:04,996 | INFO     | sum of deviations: 525894279792.5318
[2025-11-27 08:48:53] 2025-11-27 13:47:04,996 | INFO     | mean x: 1764235815.3769841
[2025-11-27 08:48:53] 2025-11-27 13:47:04,996 | INFO     | mean y: 2801623.2182539683
[2025-11-27 08:48:53] 2025-11-27 13:47:04,996 | INFO     | intersect: -23369771264.032253
[2025-11-27 08:48:53] 2025-11-27 13:47:04,996 | INFO     | chi2: 11.695827440719196
[2025-11-27 08:48:53] 2025-11-27 13:47:04,996 | INFO     | current chi2=11.695827440719196 (change=29.13149171575304 %)
[2025-11-27 08:48:53] 2025-11-27 13:47:04,997 | INFO     | sum of square deviations: 38526192649.715485
[2025-11-27 08:48:53] 2025-11-27 13:47:05,000 | INFO     | sum of deviations: 347352622339.59064
[2025-11-27 08:48:53] 2025-11-27 13:47:05,000 | INFO     | mean x: 1764235967.8877757
[2025-11-27 08:48:53] 2025-11-27 13:47:05,000 | INFO     | mean y: 2824904.0641282564
[2025-11-27 08:48:53] 2025-11-27 13:47:05,000 | INFO     | intersect: -15903548078.16645
[2025-11-27 08:48:53] 2025-11-27 13:47:05,000 | INFO     | chi2: 8.247820045379683
[2025-11-27 08:48:53] 2025-11-27 13:47:05,000 | INFO     | current chi2=8.247820045379683 (change=29.480662337195778 %)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,001 | INFO     | sum of square deviations: 37379307079.21655
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | sum of deviations: 197713397599.77747
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | mean x: 1764236120.4068825
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | mean y: 2844783.7125506075
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | intersect: -9328872275.532778
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | chi2: 5.89704249463139
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | current chi2=5.89704249463139 (change=28.501804571562722 %)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,004 | INFO     | sum of square deviations: 36255609637.218796
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | sum of deviations: 158098424627.904
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | mean x: 1764236272.9120655
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | mean y: 2850158.2535787323
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | intersect: -7690386232.190935
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | chi2: 5.795058140597377
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | current chi2=5.795058140597377 (change=1.729415281081291 %)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | left removable region: 40
[2025-11-27 08:48:53] 2025-11-27 13:47:05,008 | INFO     | sum of square deviations: 30774380755.650238
[2025-11-27 08:48:53] 2025-11-27 13:47:05,011 | INFO     | sum of deviations: 274984725778.1748
[2025-11-27 08:48:53] 2025-11-27 13:47:05,011 | INFO     | mean x: 1764236699.9460044
[2025-11-27 08:48:53] 2025-11-27 13:47:05,011 | INFO     | mean y: 2891241.52699784
[2025-11-27 08:48:53] 2025-11-27 13:47:05,011 | INFO     | intersect: -15761459924.283924
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | chi2: 1.482043714143526
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | current memory leak: 8.94 B/s (using 463 data points, chi2=1.48)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | could have reported an average CPU frequency of 3799 MHz (20 samples)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | ..............................
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | . Timing measurements:
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | . get job = 0 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | . initial setup = 5 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | . payload setup = 97 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,012 | INFO     | . stage-in = 0 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,013 | INFO     | . payload execution = 31086 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,013 | INFO     | . stage-out = 3 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,013 | INFO     | . log creation = 0 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,013 | INFO     | ..............................
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | 
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | job summary report
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | --------------------------------------------------
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | PanDA job id: 6898120847
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | task id: 47556161
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | errors: (none)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | pilot state: finished 
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | transexitcode: 0
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | exeerrorcode: 0
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | exeerrordiag: 
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | exitcode: 0
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | exitmsg: OK
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | cpuconsumptiontime: 135162 s
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | nevents: 1000
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | neventsw: 0
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | pid: 2216093
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | pgrp: 2216093
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | corecount: 8
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | event service: False
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 24: 2284321, 34: 2284349, 45: 2284377, 56: 2284533, 63: 2284823, 67: 2284851, 31187: 2322381, 31192: 2331377, 31194: 2
[2025-11-27 08:48:53] 2025-11-27 13:47:05,065 | INFO     | --------------------------------------------------
[2025-11-27 08:48:53] 2025-11-27 13:47:05,066 | INFO     | 
[2025-11-27 08:48:53] 2025-11-27 13:47:05,066 | INFO     | executing command: ls -lF /tmp/boinchome/slots/15
[2025-11-27 08:48:53] 2025-11-27 13:47:05,190 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,191 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,192 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:48:53] 2025-11-27 13:47:05,192 | INFO     | job 6898120847 has completed (purged errors)
[2025-11-27 08:48:53] 2025-11-27 13:47:05,192 | INFO     | overall cleanup function is called
[2025-11-27 08:48:53] 2025-11-27 13:47:06,215 | INFO     | --- collectZombieJob: --- 10, [2216093]
[2025-11-27 08:48:53] 2025-11-27 13:47:06,215 | INFO     | zombie collector waiting for pid 2216093
[2025-11-27 08:48:53] 2025-11-27 13:47:06,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:48:53] 2025-11-27 13:47:06,215 | INFO     | collected zombie processes
[2025-11-27 08:48:53] 2025-11-27 13:47:06,215 | INFO     | will attempt to kill all subprocesses of pid=2216093
[2025-11-27 08:48:53] 2025-11-27 13:47:07,547 | INFO     | process IDs to be killed: [2216093] (in reverse order)
[2025-11-27 08:48:53] 2025-11-27 13:47:07,851 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:48:53] 2025-11-27 13:47:07,852 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:48:53] 2025-11-27 13:47:07,886 | INFO     | did not find any defunct processes belonging to 2216093
[2025-11-27 08:48:53] 2025-11-27 13:47:07,944 | INFO     | did not find any defunct processes belonging to 2216093
[2025-11-27 08:48:53] 2025-11-27 13:47:07,945 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:48:53] 2025-11-27 13:47:07,945 | INFO     | ready for new job
[2025-11-27 08:48:53] 2025-11-27 13:47:07,945 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:48:53] 2025-11-27 13:47:07,947 | INFO     | ***************************************
[2025-11-27 08:48:53] 2025-11-27 13:47:07,947 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:48:53] 2025-11-27 13:47:07,947 | INFO     | ***************************************
[2025-11-27 08:48:53] 2025-11-27 13:47:07,947 | INFO     | 
[2025-11-27 08:48:53] 2025-11-27 13:47:07,952 | INFO     | architecture information:
[2025-11-27 08:48:53] 2025-11-27 13:47:07,952 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:48:53] 2025-11-27 13:47:07,974 | INFO     | cat /etc/os-release:
[2025-11-27 08:48:53] NAME="CentOS Linux"
[2025-11-27 08:48:53] VERSION="7 (Core)"
[2025-11-27 08:48:53] ID="centos"
[2025-11-27 08:48:53] ID_LIKE="rhel fedora"
[2025-11-27 08:48:53] VERSION_ID="7"
[2025-11-27 08:48:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:48:53] ANSI_COLOR="0;31"
[2025-11-27 08:48:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:48:53] HOME_URL="https://www.centos.org/"
[2025-11-27 08:48:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:48:53] 
[2025-11-27 08:48:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:48:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:48:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:48:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:48:53] 
[2025-11-27 08:48:53] 2025-11-27 13:47:07,974 | INFO     | ***************************************
[2025-11-27 08:48:53] 2025-11-27 13:47:08,477 | INFO     | executing command: df -mP /tmp/boinchome/slots/15
[2025-11-27 08:48:53] 2025-11-27 13:47:08,533 | INFO     | sufficient remaining disk space (156221046784 B)
[2025-11-27 08:48:53] 2025-11-27 13:47:08,533 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:48:53] 2025-11-27 13:47:08,533 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:48:53] 2025-11-27 13:47:08,533 | INFO     | update_server=False
[2025-11-27 08:48:53] 2025-11-27 13:47:08,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:48:53] 2025-11-27 13:47:08,535 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:48:53] 2025-11-27 13:47:08,560 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:48:53] 2025-11-27 13:47:08,560 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:48:53] 2025-11-27 13:47:08,560 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:48:53] 2025-11-27 13:47:08,560 | INFO     | will abort loop
[2025-11-27 08:48:53] 2025-11-27 13:47:08,799 | INFO     | all data control threads have been joined
[2025-11-27 08:48:53] 2025-11-27 13:47:08,882 | INFO     | all payload control threads have been joined
[2025-11-27 08:48:53] 2025-11-27 13:47:09,542 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:09,566 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:09,595 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:09,797 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:09,804 | INFO     | [data] control thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:09,854 | INFO     | [job] validate thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:09,889 | INFO     | [payload] control thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:10,043 | INFO     | all job control threads have been joined
[2025-11-27 08:48:53] 2025-11-27 13:47:10,086 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:48:53] 2025-11-27 13:47:10,198 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:10,208 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:48:53] 2025-11-27 13:47:10,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:10,545 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:10,820 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:10,863 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:11,049 | INFO     | [job] control thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:11,092 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:14,217 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:19,022 | INFO     | job.realtimelogging is not enabled
[2025-11-27 08:48:53] 2025-11-27 13:47:20,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:48:53] 2025-11-27 13:47:24,248 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:48:53] 2025-11-27 13:47:25,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139749088089920)>', '<ExcThread(monitor, started 139748219803392)>']
[2025-11-27 08:48:53] 2025-11-27 13:47:30,923 | INFO     | all workflow threads have been joined
[2025-11-27 08:48:53] 2025-11-27 13:47:30,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:48:53] 2025-11-27 13:47:30,923 | INFO     | traces error code: 0
[2025-11-27 08:48:53] 2025-11-27 13:47:30,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:48:53] 2025-11-27 13:47:38,415 | INFO     | PID=2108929 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:48:53] 2025-11-27 13:47:38,415 | INFO     | .. there are 97 such processes running
[2025-11-27 08:48:53] 2025-11-27 13:47:38,416 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:48:53] 2025-11-27 13:47:38,416 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:48:53] 2025-11-27 13:47:38,416 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:48:53] 2025-11-27 13:47:38,416 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:48:53] 2025-11-27 13:47:38,416 | INFO     | [monitor] control thread has ended
[2025-11-27 08:48:53] 2025-11-27 13:47:38,536 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:48:53] 2025-11-27 13:47:38,539 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:48:53] 2025-11-27 13:47:38,544 [wrapper] pilotpid: 2108929
[2025-11-27 08:48:53] 2025-11-27 13:47:38,549 [wrapper] Pilot exit status: 0
[2025-11-27 08:48:53] 2025-11-27 13:47:38,566 [wrapper] pandaids: 6898120847
[2025-11-27 08:48:53] 2025-11-27 13:47:38,753 [wrapper] cleanup supervisor_pilot 3012094 2108930
[2025-11-27 08:48:53] 2025-11-27 13:47:38,757 [wrapper] Test setup, not cleaning
[2025-11-27 08:48:53] 2025-11-27 13:47:38,760 [wrapper] apfmon messages muted
[2025-11-27 08:48:53] 2025-11-27 13:47:38,762 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:48:53] 2025-11-27 13:47:38,766 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:48:53]  *** Error codes and diagnostics ***
[2025-11-27 08:48:53]     "exeErrorCode": 0,
[2025-11-27 08:48:53]     "exeErrorDiag": "",
[2025-11-27 08:48:53]     "pilotErrorCode": 0,
[2025-11-27 08:48:53]     "pilotErrorDiag": "",
[2025-11-27 08:48:53]  *** Listing of results directory ***
[2025-11-27 08:48:53] total 1315832
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 08:48:53] -rwx------. 1 boincer umatlas     36292 Nov 25 22:50 runpilot2-wrapper.sh
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:48:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 08:48:53] -rw-r--r--. 2 boincer umatlas 410392685 Nov 27 00:02 EVNT.47483658._002447.pool.root.1
[2025-11-27 08:48:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 08:48:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 08:48:53] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:02 pandaJob.out
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas    991570 Nov 27 00:04 agis_schedconf.cvmfs.json
[2025-11-27 08:48:53] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas       531 Nov 27 08:33 boinc_task_state.xml
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas      7173 Nov 27 08:45 init_data.xml
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas 922349601 Nov 27 08:45 HITS.47556161._004292.pool.root.1
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas      1053 Nov 27 08:46 memory_monitor_summary.json
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas   1516240 Nov 27 08:46 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas   1749478 Nov 27 08:46 log.47556161._004292.job.log.tgz.1
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas      7908 Nov 27 08:47 heartbeat.json
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas       823 Nov 27 08:47 pilotlog.txt
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas        95 Nov 27 08:47 pilot_heartbeat.json
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas   3624798 Nov 27 08:47 log.47556161._004292.job.log.1
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas       353 Nov 27 08:47 output.list
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas       620 Nov 27 08:47 runtime_log
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas   5396480 Nov 27 08:47 result.tar.gz
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas      9351 Nov 27 08:47 runtime_log.err
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas       658 Nov 27 08:47 fMSNDmniLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxrMKDmdHefRm.diag
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas        28 Nov 27 08:48 wrapper_checkpoint.txt
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 08:48 boinc_mmap_file
[2025-11-27 08:48:53] -rw-r--r--. 1 boincer umatlas     21207 Nov 27 08:48 stderr.txt
[2025-11-27 08:48:53] HITS file was successfully produced:
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas 922349601 Nov 27 08:45 shared/HITS.pool.root.1
[2025-11-27 08:48:53]  *** Contents of shared directory: ***
[2025-11-27 08:48:53] total 1307388
[2025-11-27 08:48:53] -rw-r--r--. 2 boincer umatlas 410392685 Nov 27 00:02 ATLAS.root_0
[2025-11-27 08:48:53] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 08:48:53] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas 922349601 Nov 27 08:45 HITS.pool.root.1
[2025-11-27 08:48:53] -rw-------. 1 boincer umatlas   5396480 Nov 27 08:47 result.tar.gz
08:48:54 (2084279): run_atlas exited; CPU time 135819.083589
08:48:54 (2084279): called boinc_finish(0)

</stderr_txt>
]]>

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