Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:32 (2775989): wrapper (7.7.26015): starting
00:01:32 (2775989): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:01:32] Arguments: --nthreads 12
[2025-11-27 00:01:32] Threads: 12
[2025-11-27 00:01:32] Checking for CVMFS
[2025-11-27 00:01:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:01:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:01:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:01:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:01:33] 2.13.2.0 6751 35339 237068 153347 0 236 21431522 40960000 27231 16776704 0 109022690 99.585 115032234 37320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:01:33] CVMFS is ok
[2025-11-27 00:01:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:01:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:01:33] Further information can be found at the LHC@home message board.
[2025-11-27 00:01:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:01:33] Checking for apptainer binary...
[2025-11-27 00:01:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:01:33] Running /usr/bin/apptainer --version
[2025-11-27 00:01:33] apptainer version 1.4.4-1.el9
[2025-11-27 00:01:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:01:33] c-212-7.aglt2.org
[2025-11-27 00:01:33] apptainer works
[2025-11-27 00:01:33] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:01:33] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:01:33] Starting ATLAS job with PandaID=6898120850
[2025-11-27 00:01:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 21:16:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 21:16:48] 2025-11-28 02:16:13,844 | INFO     | time since job start (76453s) is within the limit (172800.0s)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,089 | INFO     | monitor loop #4418: job 0:6898120850 is in state 'finished'
[2025-11-27 21:16:48] 2025-11-28 02:16:14,089 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,126 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 21:16:48] 2025-11-28 02:16:14,132 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2974.434645833333
[2025-11-27 21:16:48] 2025-11-28 02:16:14,147 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6898120850/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,148 | INFO     | extracted standard info from prmon json
[2025-11-27 21:16:48] 2025-11-28 02:16:14,148 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 21:16:48] 2025-11-28 02:16:14,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 21:16:48] 2025-11-28 02:16:14,182 | INFO     | fitting pss+swap vs Time
[2025-11-27 21:16:48] 2025-11-28 02:16:14,184 | INFO     | sum of square deviations: 609992997569.3485
[2025-11-27 21:16:48] 2025-11-28 02:16:14,213 | INFO     | sum of deviations: 4994961288604.116
[2025-11-27 21:16:48] 2025-11-28 02:16:14,213 | INFO     | mean x: 1764257959.2777333
[2025-11-27 21:16:48] 2025-11-28 02:16:14,213 | INFO     | mean y: 3468796.327214685
[2025-11-27 21:16:48] 2025-11-28 02:16:14,214 | INFO     | intersect: -14443254764.13811
[2025-11-27 21:16:48] 2025-11-28 02:16:14,215 | INFO     | chi2: 7.551761066727776
[2025-11-27 21:16:48] 2025-11-28 02:16:14,216 | INFO     | sum of square deviations: 602720084376.1536
[2025-11-27 21:16:48] 2025-11-28 02:16:14,244 | INFO     | sum of deviations: 5566403705696.862
[2025-11-27 21:16:48] 2025-11-28 02:16:14,245 | INFO     | mean x: 1764257806.7828526
[2025-11-27 21:16:48] 2025-11-28 02:16:14,245 | INFO     | mean y: 3480778.143429487
[2025-11-27 21:16:48] 2025-11-28 02:16:14,245 | INFO     | intersect: -16290270580.159967
[2025-11-27 21:16:48] 2025-11-28 02:16:14,246 | INFO     | chi2: 3.653858723855916
[2025-11-27 21:16:48] 2025-11-28 02:16:14,246 | INFO     | current chi2=3.653858723855916 (change=51.61580601438235 %)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,247 | INFO     | sum of square deviations: 595505142900.4667
[2025-11-27 21:16:48] 2025-11-28 02:16:14,276 | INFO     | sum of deviations: 5718907678945.733
[2025-11-27 21:16:48] 2025-11-28 02:16:14,276 | INFO     | mean x: 1764257654.2872083
[2025-11-27 21:16:48] 2025-11-28 02:16:14,276 | INFO     | mean y: 3483995.297666935
[2025-11-27 21:16:48] 2025-11-28 02:16:14,277 | INFO     | intersect: -16939487475.274996
[2025-11-27 21:16:48] 2025-11-28 02:16:14,278 | INFO     | chi2: 3.044382922591124
[2025-11-27 21:16:48] 2025-11-28 02:16:14,278 | INFO     | current chi2=3.044382922591124 (change=16.680332966503215 %)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,278 | INFO     | right removable region: 1242
[2025-11-27 21:16:48] 2025-11-28 02:16:14,279 | INFO     | sum of square deviations: 602719183956.7183
[2025-11-27 21:16:48] 2025-11-28 02:16:14,341 | INFO     | sum of deviations: 4531025003744.051
[2025-11-27 21:16:48] 2025-11-28 02:16:14,341 | INFO     | mean x: 1764258111.7820513
[2025-11-27 21:16:48] 2025-11-28 02:16:14,341 | INFO     | mean y: 3478515.3237179485
[2025-11-27 21:16:48] 2025-11-28 02:16:14,341 | INFO     | intersect: -13259576370.476616
[2025-11-27 21:16:48] 2025-11-28 02:16:14,342 | INFO     | chi2: 4.906317881444786
[2025-11-27 21:16:48] 2025-11-28 02:16:14,343 | INFO     | current chi2=4.906317881444786 (change=35.03081151413171 %)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,344 | INFO     | sum of square deviations: 595503722706.319
[2025-11-27 21:16:48] 2025-11-28 02:16:14,410 | INFO     | sum of deviations: 4376848719905.4893
[2025-11-27 21:16:48] 2025-11-28 02:16:14,411 | INFO     | mean x: 1764258264.283186
[2025-11-27 21:16:48] 2025-11-28 02:16:14,411 | INFO     | mean y: 3481773.6122284797
[2025-11-27 21:16:48] 2025-11-28 02:16:14,411 | INFO     | intersect: -12963509415.826065
[2025-11-27 21:16:48] 2025-11-28 02:16:14,412 | INFO     | chi2: 4.781300021154486
[2025-11-27 21:16:48] 2025-11-28 02:16:14,412 | INFO     | current chi2=4.781300021154486 (change=2.5480994772700183 %)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,412 | INFO     | left removable region: 20
[2025-11-27 21:16:48] 2025-11-28 02:16:14,417 | INFO     | sum of square deviations: 565829091920.95
[2025-11-27 21:16:48] 2025-11-28 02:16:14,476 | INFO     | sum of deviations: 4828963679084.497
[2025-11-27 21:16:48] 2025-11-28 02:16:14,476 | INFO     | mean x: 1764258233.789689
[2025-11-27 21:16:48] 2025-11-28 02:16:14,476 | INFO     | mean y: 3502628.2937806873
[2025-11-27 21:16:48] 2025-11-28 02:16:14,477 | INFO     | intersect: -15053232794.363506
[2025-11-27 21:16:48] 2025-11-28 02:16:14,482 | INFO     | chi2: 0.10850162118052123
[2025-11-27 21:16:48] 2025-11-28 02:16:14,482 | INFO     | current memory leak: 8.53 B/s (using 1222 data points, chi2=0.11)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,483 | INFO     | could have reported an average CPU frequency of 2987 MHz (45 samples)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,483 | INFO     | ..............................
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . Timing measurements:
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . get job = 0 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . initial setup = 3 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . payload setup = 11 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . stage-in = 0 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . payload execution = 76394 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . stage-out = 4 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | . log creation = 1 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,484 | INFO     | ..............................
[2025-11-27 21:16:48] 2025-11-28 02:16:14,632 | INFO     | 
[2025-11-27 21:16:48] 2025-11-28 02:16:14,632 | INFO     | job summary report
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | --------------------------------------------------
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | PanDA job id: 6898120850
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | task id: 47556161
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | errors: (none)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | pilot state: finished 
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | transexitcode: 0
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | exeerrorcode: 0
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | exeerrordiag: 
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | exitcode: 0
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | exitmsg: OK
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | cpuconsumptiontime: 213662 s
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | nevents: 1000
[2025-11-27 21:16:48] 2025-11-28 02:16:14,633 | INFO     | neventsw: 0
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | pid: 2807109
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | pgrp: 2807109
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | corecount: 12
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | event service: False
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | sizes: {0: 2284264, 1: 2284292, 11: 2284582, 22: 2284582, 76409: 2344791, 76413: 2353785, 76415: 2353969, 76423: 2354215}
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | --------------------------------------------------
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | 
[2025-11-27 21:16:48] 2025-11-28 02:16:14,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 21:16:48] 2025-11-28 02:16:14,718 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,718 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,718 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 21:16:48] 2025-11-28 02:16:14,720 | INFO     | job 6898120850 has completed (purged errors)
[2025-11-27 21:16:48] 2025-11-28 02:16:14,720 | INFO     | overall cleanup function is called
[2025-11-27 21:16:48] 2025-11-28 02:16:15,820 | INFO     | --- collectZombieJob: --- 10, [2807109]
[2025-11-27 21:16:48] 2025-11-28 02:16:15,820 | INFO     | zombie collector waiting for pid 2807109
[2025-11-27 21:16:48] 2025-11-28 02:16:15,820 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 21:16:48] 2025-11-28 02:16:15,820 | INFO     | collected zombie processes
[2025-11-27 21:16:48] 2025-11-28 02:16:15,821 | INFO     | will attempt to kill all subprocesses of pid=2807109
[2025-11-27 21:16:48] 2025-11-28 02:16:16,295 | INFO     | process IDs to be killed: [2807109] (in reverse order)
[2025-11-27 21:16:48] 2025-11-28 02:16:16,437 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 21:16:48] 2025-11-28 02:16:16,438 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 21:16:48] 2025-11-28 02:16:16,474 | INFO     | did not find any defunct processes belonging to 2807109
[2025-11-27 21:16:48] 2025-11-28 02:16:16,493 | INFO     | did not find any defunct processes belonging to 2807109
[2025-11-27 21:16:48] 2025-11-28 02:16:16,494 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 21:16:48] 2025-11-28 02:16:16,495 | INFO     | ready for new job
[2025-11-27 21:16:48] 2025-11-28 02:16:16,495 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 21:16:48] 2025-11-28 02:16:16,523 | INFO     | ***************************************
[2025-11-27 21:16:48] 2025-11-28 02:16:16,524 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 21:16:48] 2025-11-28 02:16:16,524 | INFO     | ***************************************
[2025-11-27 21:16:48] 2025-11-28 02:16:16,524 | INFO     | 
[2025-11-27 21:16:48] 2025-11-28 02:16:16,541 | INFO     | architecture information:
[2025-11-27 21:16:48] 2025-11-28 02:16:16,562 | INFO     | executing command: cat /etc/os-release
[2025-11-27 21:16:48] 2025-11-28 02:16:16,615 | INFO     | cat /etc/os-release:
[2025-11-27 21:16:48] NAME="CentOS Linux"
[2025-11-27 21:16:48] VERSION="7 (Core)"
[2025-11-27 21:16:48] ID="centos"
[2025-11-27 21:16:48] ID_LIKE="rhel fedora"
[2025-11-27 21:16:48] VERSION_ID="7"
[2025-11-27 21:16:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 21:16:48] ANSI_COLOR="0;31"
[2025-11-27 21:16:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 21:16:48] HOME_URL="https://www.centos.org/"
[2025-11-27 21:16:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 21:16:48] 
[2025-11-27 21:16:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 21:16:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 21:16:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 21:16:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 21:16:48] 
[2025-11-27 21:16:48] 2025-11-28 02:16:16,617 | INFO     | ***************************************
[2025-11-27 21:16:48] 2025-11-28 02:16:17,136 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 21:16:48] 2025-11-28 02:16:17,203 | INFO     | sufficient remaining disk space (122438025216 B)
[2025-11-27 21:16:48] 2025-11-28 02:16:17,203 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 21:16:48] 2025-11-28 02:16:17,203 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 21:16:48] 2025-11-28 02:16:17,203 | INFO     | update_server=False
[2025-11-27 21:16:48] 2025-11-28 02:16:17,204 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 21:16:48] 2025-11-28 02:16:17,342 | INFO     | all data control threads have been joined
[2025-11-27 21:16:48] 2025-11-28 02:16:17,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:16:48] 2025-11-28 02:16:17,606 | INFO     | aborting loop
[2025-11-27 21:16:48] 2025-11-28 02:16:17,801 | INFO     | [monitor] cgroup control has ended
[2025-11-27 21:16:48] 2025-11-28 02:16:18,098 | INFO     | all job control threads have been joined
[2025-11-27 21:16:48] 2025-11-28 02:16:18,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 21:16:48] 2025-11-28 02:16:18,207 | INFO     | all payload control threads have been joined
[2025-11-27 21:16:48] 2025-11-28 02:16:18,210 | INFO     | [job] retrieve thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,368 | INFO     | [data] control thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,419 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 21:16:48] 2025-11-28 02:16:18,432 | INFO     | [job] validate thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,436 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,479 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,592 | INFO     | [data] copytool_in thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,612 | INFO     | [job] job monitor thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,652 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,784 | INFO     | [payload] failed_post thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:18,804 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:19,104 | INFO     | [job] control thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:19,224 | INFO     | [payload] control thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:19,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 21:16:48] 2025-11-28 02:16:19,688 | INFO     | [payload] validate_post thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:20,426 | INFO     | [data] copytool_out thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:20,688 | INFO     | [job] queue monitor thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:22,131 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 21:16:48] 2025-11-28 02:16:23,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140658388739904)>', '<ExcThread(monitor, started 140658115319552)>']
[2025-11-27 21:16:48] 2025-11-28 02:16:28,114 | INFO     | all workflow threads have been joined
[2025-11-27 21:16:48] 2025-11-28 02:16:28,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 21:16:48] 2025-11-28 02:16:28,115 | INFO     | traces error code: 0
[2025-11-27 21:16:48] 2025-11-28 02:16:28,115 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 21:16:48] 2025-11-28 02:16:47,519 | INFO     | PID=2784421 has CPU usage=8.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 21:16:48] 2025-11-28 02:16:47,519 | INFO     | .. there are 26 such processes running
[2025-11-27 21:16:48] 2025-11-28 02:16:47,519 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 21:16:48] 2025-11-28 02:16:47,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 21:16:48] 2025-11-28 02:16:47,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 21:16:48] 2025-11-28 02:16:47,520 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 21:16:48] 2025-11-28 02:16:47,520 | INFO     | [monitor] control thread has ended
[2025-11-27 21:16:48] 2025-11-28 02:16:48,240 [wrapper] ==== pilot stdout END ====
[2025-11-27 21:16:48] 2025-11-28 02:16:48,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 21:16:48] 2025-11-28 02:16:48,303 [wrapper] pilotpid: 2784421
[2025-11-27 21:16:48] 2025-11-28 02:16:48,346 [wrapper] Pilot exit status: 0
[2025-11-27 21:16:48] 2025-11-28 02:16:48,368 [wrapper] pandaids: 6898120850
[2025-11-27 21:16:48] 2025-11-28 02:16:48,462 [wrapper] cleanup supervisor_pilot 2369399 2784422
[2025-11-27 21:16:48] 2025-11-28 02:16:48,470 [wrapper] Test setup, not cleaning
[2025-11-27 21:16:48] 2025-11-28 02:16:48,477 [wrapper] apfmon messages muted
[2025-11-27 21:16:48] 2025-11-28 02:16:48,480 [wrapper] ==== wrapper stdout END ====
[2025-11-27 21:16:48] 2025-11-28 02:16:48,482 [wrapper] ==== wrapper stderr END ====
[2025-11-27 21:16:48]  *** Error codes and diagnostics ***
[2025-11-27 21:16:48]     "exeErrorCode": 0,
[2025-11-27 21:16:48]     "exeErrorDiag": "",
[2025-11-27 21:16:48]     "pilotErrorCode": 0,
[2025-11-27 21:16:48]     "pilotErrorDiag": "",
[2025-11-27 21:16:48]  *** Listing of results directory ***
[2025-11-27 21:16:48] total 1325160
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 21:16:48] -rwx------. 1 boincer umatlas     36292 Nov 25 22:50 runpilot2-wrapper.sh
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 21:16:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:01 run_atlas
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:01 job.xml
[2025-11-27 21:16:48] -rw-r--r--. 2 boincer umatlas 410392685 Nov 27 00:01 EVNT.47483658._002447.pool.root.1
[2025-11-27 21:16:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:01 start_atlas.sh
[2025-11-27 21:16:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:01 shared
[2025-11-27 21:16:48] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:01 input.tar.gz
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:01 boinc_lockfile
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:01 pandaJob.out
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas        57 Nov 27 00:01 setup.sh.local
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas    991570 Nov 27 00:01 agis_schedconf.cvmfs.json
[2025-11-27 21:16:48] drwx------. 5 boincer umatlas      4096 Nov 27 00:02 pilot3
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas       533 Nov 27 21:06 boinc_task_state.xml
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 21:11 init_data.xml
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas 918216260 Nov 27 21:15 HITS.47556161._004295.pool.root.1
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas      1061 Nov 27 21:15 memory_monitor_summary.json
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:16 agis_ddmendpoints.agis.ALL.json
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas   2750791 Nov 27 21:16 log.47556161._004295.job.log.tgz.1
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas        95 Nov 27 21:16 pilot_heartbeat.json
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas      8593 Nov 27 21:16 heartbeat.json
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 21:16 boinc_mmap_file
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 21:16 wrapper_checkpoint.txt
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas       823 Nov 27 21:16 pilotlog.txt
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas   9467649 Nov 27 21:16 log.47556161._004295.job.log.1
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas       353 Nov 27 21:16 output.list
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:16 runtime_log
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas  12236800 Nov 27 21:16 result.tar.gz
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas      9340 Nov 27 21:16 runtime_log.err
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas       664 Nov 27 21:16 lVWNDmniLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0rMKDm0f8PZn.diag
[2025-11-27 21:16:48] -rw-r--r--. 1 boincer umatlas     21343 Nov 27 21:16 stderr.txt
[2025-11-27 21:16:48] HITS file was successfully produced:
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas 918216260 Nov 27 21:15 shared/HITS.pool.root.1
[2025-11-27 21:16:48]  *** Contents of shared directory: ***
[2025-11-27 21:16:48] total 1310028
[2025-11-27 21:16:48] -rw-r--r--. 2 boincer umatlas 410392685 Nov 27 00:01 ATLAS.root_0
[2025-11-27 21:16:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:01 start_atlas.sh
[2025-11-27 21:16:48] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:01 input.tar.gz
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas 918216260 Nov 27 21:15 HITS.pool.root.1
[2025-11-27 21:16:48] -rw-------. 1 boincer umatlas  12236800 Nov 27 21:16 result.tar.gz
21:16:50 (2775989): run_atlas exited; CPU time 214277.843116
21:16:50 (2775989): called boinc_finish(0)

</stderr_txt>
]]>

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