Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:09 (3768105): wrapper (7.7.26015): starting
00:02:09 (3768105): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:02:09] Arguments: --nthreads 8
[2025-11-27 00:02:09] Threads: 8
[2025-11-27 00:02:09] Checking for CVMFS
[2025-11-27 00:02:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:10] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:11] 2.13.2.0 14352 35361 224632 153347 2 517 35914880 40960001 24744 16776704 0 275808703 99.679 222611868 48624 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:02:11] CVMFS is ok
[2025-11-27 00:02:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:11] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:11] Checking for apptainer binary...
[2025-11-27 00:02:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:11] Running /usr/bin/apptainer --version
[2025-11-27 00:02:11] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:11] c-208-36.aglt2.org
[2025-11-27 00:02:11] apptainer works
[2025-11-27 00:02:11] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:02:11] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:02:11] Starting ATLAS job with PandaID=6894239204
[2025-11-27 00:02:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:34:33]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:34:33] 2025-11-27 12:33:48,289 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:34:33] 2025-11-27 12:33:49,303 | INFO     | time since job start (27021s) is within the limit (172800.0s)
[2025-11-27 07:34:33] 2025-11-27 12:33:50,797 | INFO     | monitor loop #1632: job 0:6894239204 is in state 'finished'
[2025-11-27 07:34:33] 2025-11-27 12:33:50,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:34:33] 2025-11-27 12:33:51,310 | INFO     | time since job start (27023s) is within the limit (172800.0s)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,306 | INFO     | monitor loop #1633: job 0:6894239204 is in state 'finished'
[2025-11-27 07:34:33] 2025-11-27 12:33:53,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,317 | INFO     | time since job start (27025s) is within the limit (172800.0s)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,350 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 07:34:33] 2025-11-27 12:33:53,355 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3772.4529609374986
[2025-11-27 07:34:33] 2025-11-27 12:33:53,368 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6894239204/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,369 | INFO     | extracted standard info from prmon json
[2025-11-27 07:34:33] 2025-11-27 12:33:53,374 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:34:33] 2025-11-27 12:33:53,374 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:34:33] 2025-11-27 12:33:53,374 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-27 07:34:33] 2025-11-27 12:33:53,374 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-27 07:34:33] 2025-11-27 12:33:53,383 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:34:33] 2025-11-27 12:33:53,384 | INFO     | sum of square deviations: 26234016023.87242
[2025-11-27 07:34:33] 2025-11-27 12:33:53,387 | INFO     | sum of deviations: 119916487767.34848
[2025-11-27 07:34:33] 2025-11-27 12:33:53,387 | INFO     | mean x: 1764233369.214123
[2025-11-27 07:34:33] 2025-11-27 12:33:53,387 | INFO     | mean y: 2584322.8792710705
[2025-11-27 07:34:33] 2025-11-27 12:33:53,387 | INFO     | intersect: -8061780242.789877
[2025-11-27 07:34:33] 2025-11-27 12:33:53,387 | INFO     | chi2: 3.450908102204519
[2025-11-27 07:34:33] 2025-11-27 12:33:53,387 | INFO     | sum of square deviations: 25347823426.14029
[2025-11-27 07:34:33] 2025-11-27 12:33:53,409 | INFO     | sum of deviations: 147498883463.5438
[2025-11-27 07:34:33] 2025-11-27 12:33:53,409 | INFO     | mean x: 1764233216.71659
[2025-11-27 07:34:33] 2025-11-27 12:33:53,409 | INFO     | mean y: 2589022.3133640555
[2025-11-27 07:34:33] 2025-11-27 12:33:53,410 | INFO     | intersect: -10263477032.361586
[2025-11-27 07:34:33] 2025-11-27 12:33:53,410 | INFO     | chi2: 2.7300517769787667
[2025-11-27 07:34:33] 2025-11-27 12:33:53,410 | INFO     | current chi2=2.7300517769787667 (change=20.8888879064978 %)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,410 | INFO     | right removable region: 433
[2025-11-27 07:34:33] 2025-11-27 12:33:53,410 | INFO     | sum of square deviations: 25347766086.14028
[2025-11-27 07:34:33] 2025-11-27 12:33:53,417 | INFO     | sum of deviations: 7715126506.453918
[2025-11-27 07:34:33] 2025-11-27 12:33:53,417 | INFO     | mean x: 1764233521.71659
[2025-11-27 07:34:33] 2025-11-27 12:33:53,417 | INFO     | mean y: 2603579.1175115206
[2025-11-27 07:34:33] 2025-11-27 12:33:53,417 | INFO     | intersect: -534378053.13814604
[2025-11-27 07:34:33] 2025-11-27 12:33:53,417 | INFO     | chi2: 0.9240436801802452
[2025-11-27 07:34:33] 2025-11-27 12:33:53,417 | INFO     | current chi2=0.9240436801802452 (change=73.22317335573368 %)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,418 | INFO     | sum of square deviations: 24481702573.4035
[2025-11-27 07:34:33] 2025-11-27 12:33:53,424 | INFO     | sum of deviations: -17405129721.585083
[2025-11-27 07:34:33] 2025-11-27 12:33:53,424 | INFO     | mean x: 1764233674.2191143
[2025-11-27 07:34:33] 2025-11-27 12:33:53,424 | INFO     | mean y: 2607998.1445221445
[2025-11-27 07:34:33] 2025-11-27 12:33:53,424 | INFO     | intersect: 1256880076.1139526
[2025-11-27 07:34:33] 2025-11-27 12:33:53,425 | INFO     | chi2: 0.8049607479366615
[2025-11-27 07:34:33] 2025-11-27 12:33:53,425 | INFO     | current chi2=0.8049607479366615 (change=12.887154016394032 %)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,425 | INFO     | left removable region: 20
[2025-11-27 07:34:33] 2025-11-27 12:33:53,425 | INFO     | sum of square deviations: 21843337526.058094
[2025-11-27 07:34:33] 2025-11-27 12:33:53,431 | INFO     | sum of deviations: 1076741289.334139
[2025-11-27 07:34:33] 2025-11-27 12:33:53,432 | INFO     | mean x: 1764233796.2251816
[2025-11-27 07:34:33] 2025-11-27 12:33:53,432 | INFO     | mean y: 2614876.544794189
[2025-11-27 07:34:33] 2025-11-27 12:33:53,432 | INFO     | intersect: -84350925.73556714
[2025-11-27 07:34:33] 2025-11-27 12:33:53,432 | INFO     | chi2: 0.035001561315488684
[2025-11-27 07:34:33] 2025-11-27 12:33:53,432 | INFO     | current memory leak: 0.05 B/s (using 413 data points, chi2=0.04)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | could have reported an average CPU frequency of 3784 MHz (18 samples)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | ..............................
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . Timing measurements:
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . get job = 0 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . initial setup = 5 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . payload setup = 56 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . stage-in = 0 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . payload execution = 26823 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . stage-out = 4 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | . log creation = 0 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,433 | INFO     | ..............................
[2025-11-27 07:34:33] 2025-11-27 12:33:53,630 | INFO     | 
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | job summary report
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | --------------------------------------------------
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | PanDA job id: 6894239204
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | task id: 47523939
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | errors: (none)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | pilot state: finished 
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | transexitcode: 0
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | exeerrorcode: 0
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | exeerrordiag: 
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | exitcode: 0
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | exitmsg: OK
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | cpuconsumptiontime: 66273 s
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | nevents: 400
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | neventsw: 0
[2025-11-27 07:34:33] 2025-11-27 12:33:53,633 | INFO     | pid: 3855462
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | pgrp: 3855462
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | corecount: 8
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | event service: False
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | sizes: {0: 2283666, 1: 2283921, 12: 2283921, 23: 2283949, 33: 2283977, 36: 2284295, 44: 2284451, 26884: 2320793, 26890: 2329791, 26892: 2329875, 26928: 2330069}
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | --------------------------------------------------
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | 
[2025-11-27 07:34:33] 2025-11-27 12:33:53,634 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 07:34:33] 2025-11-27 12:33:53,808 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,808 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,808 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,808 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,808 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | job 6894239204 has completed (purged errors)
[2025-11-27 07:34:33] 2025-11-27 12:33:53,809 | INFO     | overall cleanup function is called
[2025-11-27 07:34:33] 2025-11-27 12:33:54,829 | INFO     | --- collectZombieJob: --- 10, [3855462]
[2025-11-27 07:34:33] 2025-11-27 12:33:54,829 | INFO     | zombie collector waiting for pid 3855462
[2025-11-27 07:34:33] 2025-11-27 12:33:54,829 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:34:33] 2025-11-27 12:33:54,829 | INFO     | collected zombie processes
[2025-11-27 07:34:33] 2025-11-27 12:33:54,829 | INFO     | will attempt to kill all subprocesses of pid=3855462
[2025-11-27 07:34:33] 2025-11-27 12:33:57,582 | INFO     | process IDs to be killed: [3855462] (in reverse order)
[2025-11-27 07:34:33] 2025-11-27 12:33:57,966 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:34:33] 2025-11-27 12:33:57,967 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:34:33] 2025-11-27 12:33:58,123 | INFO     | did not find any defunct processes belonging to 3855462
[2025-11-27 07:34:33] 2025-11-27 12:33:58,235 | INFO     | did not find any defunct processes belonging to 3855462
[2025-11-27 07:34:33] 2025-11-27 12:33:58,268 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:34:33] 2025-11-27 12:33:58,269 | INFO     | ready for new job
[2025-11-27 07:34:33] 2025-11-27 12:33:58,269 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:34:33] 2025-11-27 12:33:58,275 | INFO     | ***************************************
[2025-11-27 07:34:33] 2025-11-27 12:33:58,275 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:34:33] 2025-11-27 12:33:58,275 | INFO     | ***************************************
[2025-11-27 07:34:33] 2025-11-27 12:33:58,275 | INFO     | 
[2025-11-27 07:34:33] 2025-11-27 12:33:58,293 | INFO     | architecture information:
[2025-11-27 07:34:33] 2025-11-27 12:33:58,316 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:34:33] 2025-11-27 12:33:58,397 | INFO     | cat /etc/os-release:
[2025-11-27 07:34:33] NAME="CentOS Linux"
[2025-11-27 07:34:33] VERSION="7 (Core)"
[2025-11-27 07:34:33] ID="centos"
[2025-11-27 07:34:33] ID_LIKE="rhel fedora"
[2025-11-27 07:34:33] VERSION_ID="7"
[2025-11-27 07:34:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:34:33] ANSI_COLOR="0;31"
[2025-11-27 07:34:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:34:33] HOME_URL="https://www.centos.org/"
[2025-11-27 07:34:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:34:33] 
[2025-11-27 07:34:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:34:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:34:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:34:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:34:33] 
[2025-11-27 07:34:33] 2025-11-27 12:33:58,397 | INFO     | ***************************************
[2025-11-27 07:34:33] 2025-11-27 12:33:58,901 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 07:34:33] 2025-11-27 12:33:59,015 | INFO     | sufficient remaining disk space (157880942592 B)
[2025-11-27 07:34:33] 2025-11-27 12:33:59,016 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:34:33] 2025-11-27 12:33:59,016 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:34:33] 2025-11-27 12:33:59,016 | INFO     | update_server=False
[2025-11-27 07:34:33] 2025-11-27 12:33:59,016 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:34:33] 2025-11-27 12:33:59,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:34:33] 2025-11-27 12:33:59,016 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:34:33] 2025-11-27 12:33:59,338 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:34:33] 2025-11-27 12:33:59,338 | INFO     | aborting loop
[2025-11-27 07:34:33] 2025-11-27 12:33:59,500 | INFO     | all data control threads have been joined
[2025-11-27 07:34:33] 2025-11-27 12:33:59,944 | INFO     | all payload control threads have been joined
[2025-11-27 07:34:33] 2025-11-27 12:34:00,024 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,046 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,344 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,413 | INFO     | all job control threads have been joined
[2025-11-27 07:34:33] 2025-11-27 12:34:00,413 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,428 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,440 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:34:33] 2025-11-27 12:34:00,527 | INFO     | [data] control thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,624 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:00,950 | INFO     | [payload] control thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,027 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,115 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,247 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,265 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,376 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,376 | INFO     | [job] validate thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:01,419 | INFO     | [job] control thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:04,449 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:34:33] 2025-11-27 12:34:15,209 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:34:33] 2025-11-27 12:34:15,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140695125956416)>', '<ExcThread(monitor, started 140694756759296)>']
[2025-11-27 07:34:33] 2025-11-27 12:34:20,756 | INFO     | all workflow threads have been joined
[2025-11-27 07:34:33] 2025-11-27 12:34:20,756 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:34:33] 2025-11-27 12:34:20,756 | INFO     | traces error code: 0
[2025-11-27 07:34:33] 2025-11-27 12:34:20,757 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:34:33] 2025-11-27 12:34:30,901 | INFO     | PID=3789483 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:34:33] 2025-11-27 12:34:30,901 | INFO     | .. there are 36 such processes running
[2025-11-27 07:34:33] 2025-11-27 12:34:30,901 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:34:33] 2025-11-27 12:34:30,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:34:33] 2025-11-27 12:34:30,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:34:33] 2025-11-27 12:34:30,916 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:34:33] 2025-11-27 12:34:30,916 | INFO     | [monitor] control thread has ended
[2025-11-27 07:34:33] 2025-11-27 12:34:32,194 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:34:33] 2025-11-27 12:34:32,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:34:33] 2025-11-27 12:34:32,224 [wrapper] pilotpid: 3789483
[2025-11-27 07:34:33] 2025-11-27 12:34:32,241 [wrapper] Pilot exit status: 0
[2025-11-27 07:34:33] 2025-11-27 12:34:32,345 [wrapper] pandaids: 6894239204
[2025-11-27 07:34:33] 2025-11-27 12:34:32,596 [wrapper] cleanup supervisor_pilot 2079077 3789484
[2025-11-27 07:34:33] 2025-11-27 12:34:32,611 [wrapper] Test setup, not cleaning
[2025-11-27 07:34:33] 2025-11-27 12:34:32,656 [wrapper] apfmon messages muted
[2025-11-27 07:34:33] 2025-11-27 12:34:32,672 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:34:33] 2025-11-27 12:34:32,684 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:34:33]  *** Error codes and diagnostics ***
[2025-11-27 07:34:33]     "exeErrorCode": 0,
[2025-11-27 07:34:33]     "exeErrorDiag": "",
[2025-11-27 07:34:33]     "pilotErrorCode": 0,
[2025-11-27 07:34:33]     "pilotErrorDiag": "",
[2025-11-27 07:34:33]  *** Listing of results directory ***
[2025-11-27 07:34:33] total 630400
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:55 queuedata.json
[2025-11-27 07:34:33] -rwx------. 1 boincer umatlas     36292 Nov 25 22:56 runpilot2-wrapper.sh
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:34:33] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 07:34:33] -rw-r--r--. 2 boincer umatlas 294530292 Nov 27 00:02 EVNT.47523935._000004.pool.root.1
[2025-11-27 07:34:33] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 07:34:33] -rw-r--r--. 2 boincer umatlas    589943 Nov 27 00:02 input.tar.gz
[2025-11-27 07:34:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas      2607 Nov 27 00:02 pandaJob.out
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 07:34:33] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas      7172 Nov 27 07:31 init_data.xml
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas 339159493 Nov 27 07:31 HITS.47523939._000078.pool.root.1
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas       531 Nov 27 07:31 boinc_task_state.xml
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas      1051 Nov 27 07:33 memory_monitor_summary.json
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:33 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas    608565 Nov 27 07:33 log.47523939._000078.job.log.tgz.1
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas        95 Nov 27 07:33 pilot_heartbeat.json
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas      7790 Nov 27 07:33 heartbeat.json
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:34 boinc_mmap_file
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas        28 Nov 27 07:34 wrapper_checkpoint.txt
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas       823 Nov 27 07:34 pilotlog.txt
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas   3350813 Nov 27 07:34 log.47523939._000078.job.log.1
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas       357 Nov 27 07:34 output.list
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:34 runtime_log
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas   3983360 Nov 27 07:34 result.tar.gz
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 07:34 runtime_log.err
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas       660 Nov 27 07:34 8RSLDmooLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUtMKDmzi2fum.diag
[2025-11-27 07:34:33] -rw-r--r--. 1 boincer umatlas     21560 Nov 27 07:34 stderr.txt
[2025-11-27 07:34:33] HITS file was successfully produced:
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas 339159493 Nov 27 07:31 shared/HITS.pool.root.1
[2025-11-27 07:34:33]  *** Contents of shared directory: ***
[2025-11-27 07:34:33] total 623336
[2025-11-27 07:34:33] -rw-r--r--. 2 boincer umatlas 294530292 Nov 27 00:02 ATLAS.root_0
[2025-11-27 07:34:33] -rw-r--r--. 2 boincer umatlas    589943 Nov 27 00:02 input.tar.gz
[2025-11-27 07:34:33] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas 339159493 Nov 27 07:31 HITS.pool.root.1
[2025-11-27 07:34:33] -rw-------. 1 boincer umatlas   3983360 Nov 27 07:34 result.tar.gz
07:34:34 (3768105): run_atlas exited; CPU time 67164.893722
07:34:34 (3768105): called boinc_finish(0)

</stderr_txt>
]]>

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