Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:21 (3787301): wrapper (7.7.26015): starting
00:02:21 (3787301): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:02:21] Arguments: --nthreads 8
[2025-11-27 00:02:21] Threads: 8
[2025-11-27 00:02:21] Checking for CVMFS
[2025-11-27 00:02:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:21] 2.13.3.0 12548 31042 373120 153347 3 397 33593544 40960000 40056 16776704 34 157314912 99.632 144153715 35365 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:21] CVMFS is ok
[2025-11-27 00:02:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:21] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:21] Checking for apptainer binary...
[2025-11-27 00:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:21] Running /usr/bin/apptainer --version
[2025-11-27 00:02:21] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:22] c7-11-12.aglt2.org
[2025-11-27 00:02:22] apptainer works
[2025-11-27 00:02:22] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:02:22] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:02:22] Starting ATLAS job with PandaID=6898175864
[2025-11-27 00:02:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 12:59:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 12:59:09] 2025-11-27 17:58:18,723 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 12:59:09] 2025-11-27 17:58:18,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 12:59:09] 2025-11-27 17:58:18,734 | INFO     | fitting pss+swap vs Time
[2025-11-27 12:59:09] 2025-11-27 17:58:18,735 | INFO     | sum of square deviations: 137194783341.63245
[2025-11-27 12:59:09] 2025-11-27 17:58:18,745 | INFO     | sum of deviations: 1524542831930.797
[2025-11-27 12:59:09] 2025-11-27 17:58:18,746 | INFO     | mean x: 1764243017.7139108
[2025-11-27 12:59:09] 2025-11-27 17:58:18,746 | INFO     | mean y: 2850219.2926509185
[2025-11-27 12:59:09] 2025-11-27 17:58:18,746 | INFO     | intersect: -19601860549.79028
[2025-11-27 12:59:09] 2025-11-27 17:58:18,747 | INFO     | chi2: 8.298355785602585
[2025-11-27 12:59:09] 2025-11-27 17:58:18,747 | INFO     | sum of square deviations: 134512029106.71608
[2025-11-27 12:59:09] 2025-11-27 17:58:18,761 | INFO     | sum of deviations: 1720009057621.1995
[2025-11-27 12:59:09] 2025-11-27 17:58:18,761 | INFO     | mean x: 1764242865.2219286
[2025-11-27 12:59:09] 2025-11-27 17:58:18,761 | INFO     | mean y: 2861318.3857331574
[2025-11-27 12:59:09] 2025-11-27 17:58:18,761 | INFO     | intersect: -22556561271.38013
[2025-11-27 12:59:09] 2025-11-27 17:58:18,762 | INFO     | chi2: 6.195135901857611
[2025-11-27 12:59:09] 2025-11-27 17:58:18,762 | INFO     | current chi2=6.195135901857611 (change=25.345019400035863 %)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,762 | INFO     | sum of square deviations: 131864300376.01999
[2025-11-27 12:59:09] 2025-11-27 17:58:18,773 | INFO     | sum of deviations: 1722058033537.4604
[2025-11-27 12:59:09] 2025-11-27 17:58:18,773 | INFO     | mean x: 1764242712.724734
[2025-11-27 12:59:09] 2025-11-27 17:58:18,773 | INFO     | mean y: 2861430.6688829786
[2025-11-27 12:59:09] 2025-11-27 17:58:18,773 | INFO     | intersect: -23036947887.653976
[2025-11-27 12:59:09] 2025-11-27 17:58:18,774 | INFO     | chi2: 6.113671342495423
[2025-11-27 12:59:09] 2025-11-27 17:58:18,774 | INFO     | current chi2=6.113671342495423 (change=1.3149761466533925 %)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,774 | INFO     | right removable region: 751
[2025-11-27 12:59:09] 2025-11-27 17:58:18,774 | INFO     | sum of square deviations: 134511464856.71613
[2025-11-27 12:59:09] 2025-11-27 17:58:18,785 | INFO     | sum of deviations: 1258898598677.701
[2025-11-27 12:59:09] 2025-11-27 17:58:18,785 | INFO     | mean x: 1764243170.2219286
[2025-11-27 12:59:09] 2025-11-27 17:58:18,785 | INFO     | mean y: 2865310.65653897
[2025-11-27 12:59:09] 2025-11-27 17:58:18,785 | INFO     | intersect: -16508762579.835476
[2025-11-27 12:59:09] 2025-11-27 17:58:18,785 | INFO     | chi2: 5.05442034070374
[2025-11-27 12:59:09] 2025-11-27 17:58:18,785 | INFO     | current chi2=5.05442034070374 (change=39.09130349083106 %)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,786 | INFO     | sum of square deviations: 131863356334.20091
[2025-11-27 12:59:09] 2025-11-27 17:58:18,796 | INFO     | sum of deviations: 1069181178658.5765
[2025-11-27 12:59:09] 2025-11-27 17:58:18,797 | INFO     | mean x: 1764243322.7300532
[2025-11-27 12:59:09] 2025-11-27 17:58:18,797 | INFO     | mean y: 2876236.8550531915
[2025-11-27 12:59:09] 2025-11-27 17:58:18,797 | INFO     | intersect: -14302051285.665472
[2025-11-27 12:59:09] 2025-11-27 17:58:18,797 | INFO     | chi2: 3.5787325543726363
[2025-11-27 12:59:09] 2025-11-27 17:58:18,797 | INFO     | current chi2=3.5787325543726363 (change=29.195984640360166 %)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,798 | INFO     | sum of square deviations: 129250362220.00287
[2025-11-27 12:59:09] 2025-11-27 17:58:18,809 | INFO     | sum of deviations: 931687315953.7273
[2025-11-27 12:59:09] 2025-11-27 17:58:18,809 | INFO     | mean x: 1764243475.2342703
[2025-11-27 12:59:09] 2025-11-27 17:58:18,809 | INFO     | mean y: 2884251.1044176705
[2025-11-27 12:59:09] 2025-11-27 17:58:18,809 | INFO     | intersect: -12714474833.21318
[2025-11-27 12:59:09] 2025-11-27 17:58:18,810 | INFO     | chi2: 2.7250268480400415
[2025-11-27 12:59:09] 2025-11-27 17:58:18,810 | INFO     | current chi2=2.7250268480400415 (change=23.854973607611544 %)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,810 | INFO     | left removable region: 30
[2025-11-27 12:59:09] 2025-11-27 17:58:18,811 | INFO     | sum of square deviations: 116218522042.55208
[2025-11-27 12:59:09] 2025-11-27 17:58:18,821 | INFO     | sum of deviations: 939789377187.1144
[2025-11-27 12:59:09] 2025-11-27 17:58:18,821 | INFO     | mean x: 1764243597.2538142
[2025-11-27 12:59:09] 2025-11-27 17:58:18,821 | INFO     | mean y: 2907709.8682385576
[2025-11-27 12:59:09] 2025-11-27 17:58:18,822 | INFO     | intersect: -14263470508.764177
[2025-11-27 12:59:09] 2025-11-27 17:58:18,822 | INFO     | chi2: 0.22618018764836784
[2025-11-27 12:59:09] 2025-11-27 17:58:18,822 | INFO     | current memory leak: 8.09 B/s (using 721 data points, chi2=0.23)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,823 | INFO     | could have reported an average CPU frequency of 3275 MHz (29 samples)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,823 | INFO     | ..............................
[2025-11-27 12:59:09] 2025-11-27 17:58:18,823 | INFO     | . Timing measurements:
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . get job = 0 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . initial setup = 3 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . payload setup = 10 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . stage-in = 0 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . payload execution = 46488 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . stage-out = 3 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | . log creation = 0 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,824 | INFO     | ..............................
[2025-11-27 12:59:09] 2025-11-27 17:58:18,898 | INFO     | 
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | job summary report
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | --------------------------------------------------
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | PanDA job id: 6898175864
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | task id: 47556161
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | errors: (none)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | pilot state: finished 
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | transexitcode: 0
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | exeerrorcode: 0
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | exeerrordiag: 
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | exitcode: 0
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | exitmsg: OK
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | cpuconsumptiontime: 189162 s
[2025-11-27 12:59:09] 2025-11-27 17:58:18,899 | INFO     | nevents: 1000
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | neventsw: 0
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | pid: 3810354
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | pgrp: 3810354
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | corecount: 8
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | event service: False
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | sizes: {0: 2284092, 1: 2284291, 10: 2284553, 12: 2284581, 46502: 2331485, 46503: 2331484, 46507: 2340718, 46515: 2340908}
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | --------------------------------------------------
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | 
[2025-11-27 12:59:09] 2025-11-27 17:58:18,900 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,923 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | job 6898175864 has completed (purged errors)
[2025-11-27 12:59:09] 2025-11-27 17:58:18,924 | INFO     | overall cleanup function is called
[2025-11-27 12:59:09] 2025-11-27 17:58:19,941 | INFO     | --- collectZombieJob: --- 10, [3810354]
[2025-11-27 12:59:09] 2025-11-27 17:58:19,941 | INFO     | zombie collector waiting for pid 3810354
[2025-11-27 12:59:09] 2025-11-27 17:58:19,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 12:59:09] 2025-11-27 17:58:19,941 | INFO     | collected zombie processes
[2025-11-27 12:59:09] 2025-11-27 17:58:19,941 | INFO     | will attempt to kill all subprocesses of pid=3810354
[2025-11-27 12:59:09] 2025-11-27 17:58:20,441 | INFO     | process IDs to be killed: [3810354] (in reverse order)
[2025-11-27 12:59:09] 2025-11-27 17:58:20,614 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 12:59:09] 2025-11-27 17:58:20,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 12:59:09] 2025-11-27 17:58:20,635 | INFO     | did not find any defunct processes belonging to 3810354
[2025-11-27 12:59:09] 2025-11-27 17:58:20,653 | INFO     | did not find any defunct processes belonging to 3810354
[2025-11-27 12:59:09] 2025-11-27 17:58:20,654 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 12:59:09] 2025-11-27 17:58:20,654 | INFO     | ready for new job
[2025-11-27 12:59:09] 2025-11-27 17:58:20,655 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 12:59:09] 2025-11-27 17:58:20,675 | INFO     | ***************************************
[2025-11-27 12:59:09] 2025-11-27 17:58:20,675 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 12:59:09] 2025-11-27 17:58:20,675 | INFO     | ***************************************
[2025-11-27 12:59:09] 2025-11-27 17:58:20,675 | INFO     | 
[2025-11-27 12:59:09] 2025-11-27 17:58:20,679 | INFO     | architecture information:
[2025-11-27 12:59:09] 2025-11-27 17:58:20,680 | INFO     | executing command: cat /etc/os-release
[2025-11-27 12:59:09] 2025-11-27 17:58:20,700 | INFO     | cat /etc/os-release:
[2025-11-27 12:59:09] NAME="CentOS Linux"
[2025-11-27 12:59:09] VERSION="7 (Core)"
[2025-11-27 12:59:09] ID="centos"
[2025-11-27 12:59:09] ID_LIKE="rhel fedora"
[2025-11-27 12:59:09] VERSION_ID="7"
[2025-11-27 12:59:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 12:59:09] ANSI_COLOR="0;31"
[2025-11-27 12:59:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 12:59:09] HOME_URL="https://www.centos.org/"
[2025-11-27 12:59:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 12:59:09] 
[2025-11-27 12:59:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 12:59:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 12:59:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 12:59:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 12:59:09] 
[2025-11-27 12:59:09] 2025-11-27 17:58:20,700 | INFO     | ***************************************
[2025-11-27 12:59:09] 2025-11-27 17:58:21,204 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-27 12:59:09] 2025-11-27 17:58:21,235 | INFO     | sufficient remaining disk space (80329310208 B)
[2025-11-27 12:59:09] 2025-11-27 17:58:21,235 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 12:59:09] 2025-11-27 17:58:21,235 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 12:59:09] 2025-11-27 17:58:21,235 | INFO     | update_server=False
[2025-11-27 12:59:09] 2025-11-27 17:58:21,235 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 12:59:09] 2025-11-27 17:58:21,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:59:09] 2025-11-27 17:58:21,236 | INFO     | aborting loop
[2025-11-27 12:59:09] 2025-11-27 17:58:21,567 | INFO     | all job control threads have been joined
[2025-11-27 12:59:09] 2025-11-27 17:58:21,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 12:59:09] 2025-11-27 17:58:21,826 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 12:59:09] 2025-11-27 17:58:21,985 | INFO     | all data control threads have been joined
[2025-11-27 12:59:09] 2025-11-27 17:58:22,240 | INFO     | [job] retrieve thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:22,244 | INFO     | [job] job monitor thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:22,501 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:22,573 | INFO     | [job] control thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:22,592 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:22,666 | INFO     | all payload control threads have been joined
[2025-11-27 12:59:09] 2025-11-27 17:58:22,831 | INFO     | [job] validate thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:22,990 | INFO     | [data] control thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,008 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,017 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,189 | INFO     | [data] copytool_in thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,271 | INFO     | [payload] failed_post thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,665 | INFO     | [data] copytool_out thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,672 | INFO     | [payload] control thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,695 | INFO     | [payload] validate_post thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:23,913 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 12:59:09] 2025-11-27 17:58:24,919 | INFO     | [job] queue monitor thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:25,835 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 12:59:09] 2025-11-27 17:58:50,681 | INFO     | PID=3795078 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 12:59:09] 2025-11-27 17:58:50,681 | INFO     | .. there are 46 such processes running
[2025-11-27 12:59:09] 2025-11-27 17:58:50,682 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 12:59:09] 2025-11-27 17:58:50,682 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 12:59:09] 2025-11-27 17:58:50,682 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 12:59:09] 2025-11-27 17:59:03,958 | INFO     | [monitor] cgroup control has ended
[2025-11-27 12:59:09] 2025-11-27 17:59:04,348 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140710630172480)>', '<ExcThread(monitor, started 140710284084992)>']
[2025-11-27 12:59:09] 2025-11-27 17:59:04,779 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 12:59:09] 2025-11-27 17:59:04,779 | INFO     | [monitor] control thread has ended
[2025-11-27 12:59:09] 2025-11-27 17:59:09,373 | INFO     | all workflow threads have been joined
[2025-11-27 12:59:09] 2025-11-27 17:59:09,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 12:59:09] 2025-11-27 17:59:09,373 | INFO     | traces error code: 0
[2025-11-27 12:59:09] 2025-11-27 17:59:09,373 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 12:59:09] 2025-11-27 17:59:09,491 [wrapper] ==== pilot stdout END ====
[2025-11-27 12:59:09] 2025-11-27 17:59:09,494 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 12:59:09] 2025-11-27 17:59:09,497 [wrapper] pilotpid: 3795078
[2025-11-27 12:59:09] 2025-11-27 17:59:09,507 [wrapper] Pilot exit status: 0
[2025-11-27 12:59:09] 2025-11-27 17:59:09,532 [wrapper] pandaids: 6898175864
[2025-11-27 12:59:09] 2025-11-27 17:59:09,646 [wrapper] cleanup supervisor_pilot 2844474 3795079
[2025-11-27 12:59:09] 2025-11-27 17:59:09,649 [wrapper] Test setup, not cleaning
[2025-11-27 12:59:09] 2025-11-27 17:59:09,652 [wrapper] apfmon messages muted
[2025-11-27 12:59:09] 2025-11-27 17:59:09,655 [wrapper] ==== wrapper stdout END ====
[2025-11-27 12:59:09] 2025-11-27 17:59:09,658 [wrapper] ==== wrapper stderr END ====
[2025-11-27 12:59:09]  *** Error codes and diagnostics ***
[2025-11-27 12:59:09]     "exeErrorCode": 0,
[2025-11-27 12:59:09]     "exeErrorDiag": "",
[2025-11-27 12:59:09]     "pilotErrorCode": 0,
[2025-11-27 12:59:09]     "pilotErrorDiag": "",
[2025-11-27 12:59:09]  *** Listing of results directory ***
[2025-11-27 12:59:09] total 1301180
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:55 queuedata.json
[2025-11-27 12:59:09] -rwx------. 1 boincer umatlas     36292 Nov 25 22:56 runpilot2-wrapper.sh
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 12:59:09] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 12:59:09] -rw-r--r--. 2 boincer umatlas 411430956 Nov 27 00:02 EVNT.47483658._002458.pool.root.1
[2025-11-27 12:59:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:59:09] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 12:59:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:02 input.tar.gz
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas      2784 Nov 27 00:02 pandaJob.out
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas    991570 Nov 27 00:02 agis_schedconf.cvmfs.json
[2025-11-27 12:59:09] drwx------. 5 boincer umatlas      4096 Nov 27 00:02 pilot3
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas       533 Nov 27 12:50 boinc_task_state.xml
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas      6903 Nov 27 12:55 init_data.xml
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas 900768349 Nov 27 12:57 HITS.47556161._004405.pool.root.1
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas      1048 Nov 27 12:58 memory_monitor_summary.json
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas   1516240 Nov 27 12:58 agis_ddmendpoints.agis.ALL.json
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas   1986831 Nov 27 12:58 log.47556161._004405.job.log.tgz.1
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas      8583 Nov 27 12:58 heartbeat.json
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas        95 Nov 27 12:58 pilot_heartbeat.json
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 12:59 boinc_mmap_file
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas        29 Nov 27 12:59 wrapper_checkpoint.txt
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas      4824 Nov 27 12:59 pilotlog.txt
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas   6149705 Nov 27 12:59 log.47556161._004405.job.log.1
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas       353 Nov 27 12:59 output.list
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas       620 Nov 27 12:59 runtime_log
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas   8161280 Nov 27 12:59 result.tar.gz
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 12:59 runtime_log.err
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas       660 Nov 27 12:59 GxNLDmooLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRtMKDmBYAH4n.diag
[2025-11-27 12:59:09] -rw-r--r--. 1 boincer umatlas     21143 Nov 27 12:59 stderr.txt
[2025-11-27 12:59:09] HITS file was successfully produced:
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas 900768349 Nov 27 12:57 shared/HITS.pool.root.1
[2025-11-27 12:59:09]  *** Contents of shared directory: ***
[2025-11-27 12:59:09] total 1290028
[2025-11-27 12:59:09] -rw-r--r--. 2 boincer umatlas 411430956 Nov 27 00:02 ATLAS.root_0
[2025-11-27 12:59:09] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 12:59:09] -rw-r--r--. 2 boincer umatlas    590104 Nov 27 00:02 input.tar.gz
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas 900768349 Nov 27 12:57 HITS.pool.root.1
[2025-11-27 12:59:09] -rw-------. 1 boincer umatlas   8161280 Nov 27 12:59 result.tar.gz
12:59:11 (3787301): run_atlas exited; CPU time 189466.263896
12:59:11 (3787301): called boinc_finish(0)

</stderr_txt>
]]>

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