Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:29:25 (3135070): wrapper (7.7.26015): starting
08:29:25 (3135070): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 08:29:25] Arguments: --nthreads 8
[2025-11-28 08:29:25] Threads: 8
[2025-11-28 08:29:25] Checking for CVMFS
[2025-11-28 08:29:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 08:29:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 08:29:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 08:29:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 08:29:26] 2.13.2.0 5795 36787 200180 153408 3 544 30093655 39288833 8706 16776704 0 27433575 99.540 30923236 37232 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-28 08:29:26] CVMFS is ok
[2025-11-28 08:29:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-28 08:29:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-28 08:29:26] Further information can be found at the LHC@home message board.
[2025-11-28 08:29:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 08:29:26] Checking for apptainer binary...
[2025-11-28 08:29:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 08:29:26] Running /usr/bin/apptainer --version
[2025-11-28 08:29:26] apptainer version 1.4.4-1.el9
[2025-11-28 08:29:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 08:29:26] c-210-27.aglt2.org
[2025-11-28 08:29:26] apptainer works
[2025-11-28 08:29:26] Set ATHENA_PROC_NUMBER=8
[2025-11-28 08:29:26] Set ATHENA_CORE_NUMBER=8
[2025-11-28 08:29:26] Starting ATLAS job with PandaID=6898176665
[2025-11-28 08:29:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 09:22:46]  *** The last 200 lines of the pilot log: ***
[2025-11-29 09:22:46] 2025-11-29 14:22:12,192 | INFO     | time since job start (89550s) is within the limit (172800.0s)
[2025-11-29 09:22:46] 2025-11-29 14:22:12,507 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 09:22:46] 2025-11-29 14:22:12,518 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.1666250000007
[2025-11-29 09:22:46] 2025-11-29 14:22:12,533 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898176665/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 09:22:46] 2025-11-29 14:22:12,534 | INFO     | extracted standard info from prmon json
[2025-11-29 09:22:46] 2025-11-29 14:22:12,534 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 09:22:46] 2025-11-29 14:22:12,534 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 09:22:46] 2025-11-29 14:22:12,588 | INFO     | fitting pss+swap vs Time
[2025-11-29 09:22:46] 2025-11-29 14:22:12,591 | INFO     | sum of square deviations: 978696460350.2058
[2025-11-29 09:22:46] 2025-11-29 14:22:12,650 | INFO     | sum of deviations: 3909901189158.5444
[2025-11-29 09:22:46] 2025-11-29 14:22:12,650 | INFO     | mean x: 1764381340.0933878
[2025-11-29 09:22:46] 2025-11-29 14:22:12,650 | INFO     | mean y: 2951291.0252215406
[2025-11-29 09:22:46] 2025-11-29 14:22:12,651 | INFO     | intersect: -7045768081.36505
[2025-11-29 09:22:46] 2025-11-29 14:22:12,653 | INFO     | chi2: 5.330711393545248
[2025-11-29 09:22:46] 2025-11-29 14:22:12,655 | INFO     | sum of square deviations: 968723809675.262
[2025-11-29 09:22:46] 2025-11-29 14:22:12,718 | INFO     | sum of deviations: 4353687045076.9136
[2025-11-29 09:22:46] 2025-11-29 14:22:12,718 | INFO     | mean x: 1764381187.6176472
[2025-11-29 09:22:46] 2025-11-29 14:22:12,718 | INFO     | mean y: 2958075.235978112
[2025-11-29 09:22:46] 2025-11-29 14:22:12,718 | INFO     | intersect: -7926612192.767863
[2025-11-29 09:22:46] 2025-11-29 14:22:12,721 | INFO     | chi2: 2.8149557690703957
[2025-11-29 09:22:46] 2025-11-29 14:22:12,721 | INFO     | current chi2=2.8149557690703957 (change=47.193618989035556 %)
[2025-11-29 09:22:46] 2025-11-29 14:22:12,723 | INFO     | sum of square deviations: 958819160273.5912
[2025-11-29 09:22:46] 2025-11-29 14:22:12,806 | INFO     | sum of deviations: 4514108130416.127
[2025-11-29 09:22:46] 2025-11-29 14:22:12,806 | INFO     | mean x: 1764381035.1420727
[2025-11-29 09:22:46] 2025-11-29 14:22:12,806 | INFO     | mean y: 2960542.7433081674
[2025-11-29 09:22:46] 2025-11-29 14:22:12,806 | INFO     | intersect: -8303722412.5850115
[2025-11-29 09:22:46] 2025-11-29 14:22:12,812 | INFO     | chi2: 2.3394869553571236
[2025-11-29 09:22:46] 2025-11-29 14:22:12,812 | INFO     | current chi2=2.3394869553571236 (change=16.890809402319302 %)
[2025-11-29 09:22:46] 2025-11-29 14:22:12,812 | INFO     | right removable region: 1456
[2025-11-29 09:22:46] 2025-11-29 14:22:12,814 | INFO     | sum of square deviations: 968717551271.5005
[2025-11-29 09:22:46] 2025-11-29 14:22:12,924 | INFO     | sum of deviations: 3511409646620.809
[2025-11-29 09:22:46] 2025-11-29 14:22:12,924 | INFO     | mean x: 1764381492.6169631
[2025-11-29 09:22:46] 2025-11-29 14:22:12,924 | INFO     | mean y: 2957376.8139534886
[2025-11-29 09:22:46] 2025-11-29 14:22:12,924 | INFO     | intersect: -6392576786.227174
[2025-11-29 09:22:46] 2025-11-29 14:22:12,926 | INFO     | chi2: 3.2699236341130855
[2025-11-29 09:22:46] 2025-11-29 14:22:12,927 | INFO     | current chi2=3.2699236341130855 (change=38.65877567349623 %)
[2025-11-29 09:22:46] 2025-11-29 14:22:12,929 | INFO     | sum of square deviations: 958807715703.4357
[2025-11-29 09:22:46] 2025-11-29 14:22:12,982 | INFO     | sum of deviations: 3414453768738.368
[2025-11-29 09:22:46] 2025-11-29 14:22:12,982 | INFO     | mean x: 1764381645.132464
[2025-11-29 09:22:46] 2025-11-29 14:22:12,983 | INFO     | mean y: 2958868.713109128
[2025-11-29 09:22:46] 2025-11-29 14:22:12,983 | INFO     | intersect: -6280260862.466779
[2025-11-29 09:22:46] 2025-11-29 14:22:12,985 | INFO     | chi2: 3.2240471731453626
[2025-11-29 09:22:46] 2025-11-29 14:22:12,985 | INFO     | current chi2=3.2240471731453626 (change=1.4029826412189643 %)
[2025-11-29 09:22:46] 2025-11-29 14:22:12,985 | INFO     | left removable region: 20
[2025-11-29 09:22:46] 2025-11-29 14:22:12,987 | INFO     | sum of square deviations: 917935290234.074
[2025-11-29 09:22:46] 2025-11-29 14:22:13,081 | INFO     | sum of deviations: 3888027061607.1704
[2025-11-29 09:22:46] 2025-11-29 14:22:13,082 | INFO     | mean x: 1764381614.7158775
[2025-11-29 09:22:46] 2025-11-29 14:22:13,082 | INFO     | mean y: 2970039.049442897
[2025-11-29 09:22:46] 2025-11-29 14:22:13,082 | INFO     | intersect: -7470283836.251717
[2025-11-29 09:22:46] 2025-11-29 14:22:13,084 | INFO     | chi2: 0.21073841465545412
[2025-11-29 09:22:46] 2025-11-29 14:22:13,084 | INFO     | current memory leak: 4.24 B/s (using 1436 data points, chi2=0.21)
[2025-11-29 09:22:46] 2025-11-29 14:22:13,085 | INFO     | could have reported an average CPU frequency of 2600 MHz (52 samples)
[2025-11-29 09:22:46] 2025-11-29 14:22:13,085 | INFO     | ..............................
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . Timing measurements:
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . get job = 0 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . initial setup = 3 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . payload setup = 11 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . stage-in = 0 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . payload execution = 89487 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . stage-out = 6 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | . log creation = 1 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,086 | INFO     | ..............................
[2025-11-29 09:22:46] 2025-11-29 14:22:13,505 | INFO     | 
[2025-11-29 09:22:46] 2025-11-29 14:22:13,505 | INFO     | job summary report
[2025-11-29 09:22:46] 2025-11-29 14:22:13,505 | INFO     | --------------------------------------------------
[2025-11-29 09:22:46] 2025-11-29 14:22:13,505 | INFO     | PanDA job id: 6898176665
[2025-11-29 09:22:46] 2025-11-29 14:22:13,505 | INFO     | task id: 47556161
[2025-11-29 09:22:46] 2025-11-29 14:22:13,505 | INFO     | errors: (none)
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | pilot state: finished 
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | transexitcode: 0
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | exeerrorcode: 0
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | exeerrordiag: 
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | exitcode: 0
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | exitmsg: OK
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | cpuconsumptiontime: 306009 s
[2025-11-29 09:22:46] 2025-11-29 14:22:13,506 | INFO     | nevents: 1000
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | neventsw: 0
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | pid: 3148000
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | pgrp: 3148000
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | corecount: 8
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | event service: False
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | sizes: {0: 2284258, 1: 2284258, 9: 2284548, 11: 2284576, 89502: 2352656, 89503: 2352655, 89510: 2361889, 89532: 2362079}
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | --------------------------------------------------
[2025-11-29 09:22:46] 2025-11-29 14:22:13,507 | INFO     | 
[2025-11-29 09:22:46] 2025-11-29 14:22:13,508 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-29 09:22:46] 2025-11-29 14:22:13,571 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,571 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,572 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,573 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 09:22:46] 2025-11-29 14:22:13,574 | INFO     | job 6898176665 has completed (purged errors)
[2025-11-29 09:22:46] 2025-11-29 14:22:13,574 | INFO     | overall cleanup function is called
[2025-11-29 09:22:46] 2025-11-29 14:22:14,610 | INFO     | --- collectZombieJob: --- 10, [3148000]
[2025-11-29 09:22:46] 2025-11-29 14:22:14,610 | INFO     | zombie collector waiting for pid 3148000
[2025-11-29 09:22:46] 2025-11-29 14:22:14,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 09:22:46] 2025-11-29 14:22:14,610 | INFO     | collected zombie processes
[2025-11-29 09:22:46] 2025-11-29 14:22:14,610 | INFO     | will attempt to kill all subprocesses of pid=3148000
[2025-11-29 09:22:46] 2025-11-29 14:22:15,082 | INFO     | process IDs to be killed: [3148000] (in reverse order)
[2025-11-29 09:22:46] 2025-11-29 14:22:15,280 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 09:22:46] 2025-11-29 14:22:15,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 09:22:46] 2025-11-29 14:22:15,293 | INFO     | did not find any defunct processes belonging to 3148000
[2025-11-29 09:22:46] 2025-11-29 14:22:15,300 | INFO     | did not find any defunct processes belonging to 3148000
[2025-11-29 09:22:46] 2025-11-29 14:22:15,305 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 09:22:46] 2025-11-29 14:22:15,305 | INFO     | ready for new job
[2025-11-29 09:22:46] 2025-11-29 14:22:15,305 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 09:22:46] 2025-11-29 14:22:15,316 | INFO     | ***************************************
[2025-11-29 09:22:46] 2025-11-29 14:22:15,316 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 09:22:46] 2025-11-29 14:22:15,321 | INFO     | ***************************************
[2025-11-29 09:22:46] 2025-11-29 14:22:15,321 | INFO     | 
[2025-11-29 09:22:46] 2025-11-29 14:22:15,323 | INFO     | architecture information:
[2025-11-29 09:22:46] 2025-11-29 14:22:15,323 | INFO     | executing command: cat /etc/os-release
[2025-11-29 09:22:46] 2025-11-29 14:22:15,369 | INFO     | cat /etc/os-release:
[2025-11-29 09:22:46] NAME="CentOS Linux"
[2025-11-29 09:22:46] VERSION="7 (Core)"
[2025-11-29 09:22:46] ID="centos"
[2025-11-29 09:22:46] ID_LIKE="rhel fedora"
[2025-11-29 09:22:46] VERSION_ID="7"
[2025-11-29 09:22:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 09:22:46] ANSI_COLOR="0;31"
[2025-11-29 09:22:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 09:22:46] HOME_URL="https://www.centos.org/"
[2025-11-29 09:22:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 09:22:46] 
[2025-11-29 09:22:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 09:22:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 09:22:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 09:22:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 09:22:46] 
[2025-11-29 09:22:46] 2025-11-29 14:22:15,369 | INFO     | ***************************************
[2025-11-29 09:22:46] 2025-11-29 14:22:15,873 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-29 09:22:46] 2025-11-29 14:22:15,953 | INFO     | sufficient remaining disk space (50330599424 B)
[2025-11-29 09:22:46] 2025-11-29 14:22:15,953 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 09:22:46] 2025-11-29 14:22:15,954 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 09:22:46] 2025-11-29 14:22:15,954 | INFO     | update_server=False
[2025-11-29 09:22:46] 2025-11-29 14:22:15,954 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 09:22:46] 2025-11-29 14:22:15,955 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 09:22:46] 2025-11-29 14:22:16,024 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 09:22:46] 2025-11-29 14:22:16,024 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 09:22:46] 2025-11-29 14:22:16,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:22:46] 2025-11-29 14:22:16,024 | INFO     | will abort loop
[2025-11-29 09:22:46] 2025-11-29 14:22:16,409 | INFO     | all job control threads have been joined
[2025-11-29 09:22:46] 2025-11-29 14:22:16,458 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 09:22:46] 2025-11-29 14:22:16,462 | INFO     | all data control threads have been joined
[2025-11-29 09:22:46] 2025-11-29 14:22:16,960 | INFO     | [job] retrieve thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,030 | INFO     | [job] job monitor thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,132 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,168 | INFO     | [payload] validate_post thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,182 | INFO     | [monitor] cgroup control has ended
[2025-11-29 09:22:46] 2025-11-29 14:22:17,293 | INFO     | all payload control threads have been joined
[2025-11-29 09:22:46] 2025-11-29 14:22:17,415 | INFO     | [job] control thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,468 | INFO     | [data] control thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,781 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,856 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,875 | INFO     | [job] validate thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:17,966 | INFO     | [payload] failed_post thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:18,206 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 09:22:46] 2025-11-29 14:22:18,299 | INFO     | [payload] control thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:18,354 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:18,456 | INFO     | [data] copytool_in thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:18,466 | INFO     | [data] copytool_out thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:19,214 | INFO     | [job] queue monitor thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:19,963 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 09:22:46] 2025-11-29 14:22:20,528 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140256141047616)>', '<ExcThread(monitor, started 140255512491776)>']
[2025-11-29 09:22:46] 2025-11-29 14:22:25,563 | INFO     | all workflow threads have been joined
[2025-11-29 09:22:46] 2025-11-29 14:22:25,563 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 09:22:46] 2025-11-29 14:22:25,598 | INFO     | traces error code: 0
[2025-11-29 09:22:46] 2025-11-29 14:22:25,598 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 09:22:46] 2025-11-29 14:22:45,975 | INFO     | PID=3138728 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 09:22:46] 2025-11-29 14:22:45,975 | INFO     | .. there are 8 such processes running
[2025-11-29 09:22:46] 2025-11-29 14:22:45,976 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 09:22:46] 2025-11-29 14:22:45,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 09:22:46] 2025-11-29 14:22:45,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 09:22:46] 2025-11-29 14:22:45,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 09:22:46] 2025-11-29 14:22:45,977 | INFO     | [monitor] control thread has ended
[2025-11-29 09:22:46] 2025-11-29 14:22:46,137 [wrapper] ==== pilot stdout END ====
[2025-11-29 09:22:46] 2025-11-29 14:22:46,140 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 09:22:46] 2025-11-29 14:22:46,143 [wrapper] pilotpid: 3138728
[2025-11-29 09:22:46] 2025-11-29 14:22:46,145 [wrapper] Pilot exit status: 0
[2025-11-29 09:22:46] 2025-11-29 14:22:46,158 [wrapper] pandaids: 6898176665
[2025-11-29 09:22:46] 2025-11-29 14:22:46,206 [wrapper] cleanup supervisor_pilot 1052824 3138729
[2025-11-29 09:22:46] 2025-11-29 14:22:46,209 [wrapper] Test setup, not cleaning
[2025-11-29 09:22:46] 2025-11-29 14:22:46,211 [wrapper] apfmon messages muted
[2025-11-29 09:22:46] 2025-11-29 14:22:46,214 [wrapper] ==== wrapper stdout END ====
[2025-11-29 09:22:46] 2025-11-29 14:22:46,216 [wrapper] ==== wrapper stderr END ====
[2025-11-29 09:22:46]  *** Error codes and diagnostics ***
[2025-11-29 09:22:46]     "exeErrorCode": 0,
[2025-11-29 09:22:46]     "exeErrorDiag": "",
[2025-11-29 09:22:46]     "pilotErrorCode": 0,
[2025-11-29 09:22:46]     "pilotErrorDiag": "",
[2025-11-29 09:22:46]  *** Listing of results directory ***
[2025-11-29 09:22:46] total 1346400
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:57 queuedata.json
[2025-11-29 09:22:46] -rwx------. 1 boincer umatlas     36292 Nov 25 22:58 runpilot2-wrapper.sh
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas       100 Nov 28 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 09:22:46] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 28 08:29 run_atlas
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas       105 Nov 28 08:29 job.xml
[2025-11-29 09:22:46] -rw-r--r--. 2 boincer umatlas 411636083 Nov 28 08:29 EVNT.47483658._002464.pool.root.1
[2025-11-29 09:22:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 08:29 start_atlas.sh
[2025-11-29 09:22:46] drwxrwx--x. 2 boincer umatlas      4096 Nov 28 08:29 shared
[2025-11-29 09:22:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 28 08:29 input.tar.gz
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas         0 Nov 28 08:29 boinc_lockfile
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas      2782 Nov 28 08:29 pandaJob.out
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas        57 Nov 28 08:29 setup.sh.local
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas    991856 Nov 28 08:29 agis_schedconf.cvmfs.json
[2025-11-29 09:22:46] drwx------. 5 boincer umatlas      4096 Nov 28 08:29 pilot3
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas       533 Nov 29 09:11 boinc_task_state.xml
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas      6662 Nov 29 09:20 init_data.xml
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas 933822718 Nov 29 09:20 HITS.47556161._004461.pool.root.1
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas      1057 Nov 29 09:21 memory_monitor_summary.json
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas   1516240 Nov 29 09:21 agis_ddmendpoints.agis.ALL.json
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas   2524630 Nov 29 09:21 log.47556161._004461.job.log.tgz.1
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas      8614 Nov 29 09:22 heartbeat.json
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas      8192 Nov 29 09:22 boinc_mmap_file
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas        29 Nov 29 09:22 wrapper_checkpoint.txt
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas        95 Nov 29 09:22 pilot_heartbeat.json
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas       822 Nov 29 09:22 pilotlog.txt
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas  12143643 Nov 29 09:22 log.47556161._004461.job.log.1
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas       353 Nov 29 09:22 output.list
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas       620 Nov 29 09:22 runtime_log
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas  14684160 Nov 29 09:22 result.tar.gz
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas       661 Nov 29 09:22 we8LDmlqLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6sJKDmtOcJon.diag
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas      9343 Nov 29 09:22 runtime_log.err
[2025-11-29 09:22:46] -rw-r--r--. 1 boincer umatlas     21313 Nov 29 09:22 stderr.txt
[2025-11-29 09:22:46] HITS file was successfully produced:
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas 933822718 Nov 29 09:20 shared/HITS.pool.root.1
[2025-11-29 09:22:46]  *** Contents of shared directory: ***
[2025-11-29 09:22:46] total 1328876
[2025-11-29 09:22:46] -rw-r--r--. 2 boincer umatlas 411636083 Nov 28 08:29 ATLAS.root_0
[2025-11-29 09:22:46] -rw-r--r--. 2 boincer umatlas     15847 Nov 28 08:29 start_atlas.sh
[2025-11-29 09:22:46] -rw-r--r--. 2 boincer umatlas    590105 Nov 28 08:29 input.tar.gz
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas 933822718 Nov 29 09:20 HITS.pool.root.1
[2025-11-29 09:22:46] -rw-------. 1 boincer umatlas  14684160 Nov 29 09:22 result.tar.gz
09:22:48 (3135070): run_atlas exited; CPU time 307117.605661
09:22:48 (3135070): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN