Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:53 (745086): wrapper (7.7.26015): starting
00:01:53 (745086): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:01:53] Arguments: --nthreads 12
[2025-11-27 00:01:53] Threads: 12
[2025-11-27 00:01:53] Checking for CVMFS
[2025-11-27 00:01:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:01:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:01:54] 2.13.2.0 8544 35371 174788 153347 1 581 21871999 40960000 22372 16776704 0 75860007 99.787 42811062 39356 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:01:54] CVMFS is ok
[2025-11-27 00:01:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:01:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:01:54] Further information can be found at the LHC@home message board.
[2025-11-27 00:01:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:01:54] Checking for apptainer binary...
[2025-11-27 00:01:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:01:54] Running /usr/bin/apptainer --version
[2025-11-27 00:01:54] apptainer version 1.4.4-1.el9
[2025-11-27 00:01:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:01:55] c-212-10.aglt2.org
[2025-11-27 00:01:55] apptainer works
[2025-11-27 00:01:55] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:01:55] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:01:55] Starting ATLAS job with PandaID=6892522886
[2025-11-27 00:01:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:09:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:09:59] 2025-11-27 19:09:19,051 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:09:59] 2025-11-27 19:09:19,063 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:09:59] 2025-11-27 19:09:19,064 | INFO     | sum of square deviations: 178574715226.15265
[2025-11-27 14:09:59] 2025-11-27 19:09:19,079 | INFO     | sum of deviations: 2424647387053.657
[2025-11-27 14:09:59] 2025-11-27 19:09:19,080 | INFO     | mean x: 1764245117.1141827
[2025-11-27 14:09:59] 2025-11-27 19:09:19,080 | INFO     | mean y: 3419091.3509615385
[2025-11-27 14:09:59] 2025-11-27 19:09:19,080 | INFO     | intersect: -23951104973.91605
[2025-11-27 14:09:59] 2025-11-27 19:09:19,081 | INFO     | chi2: 9.086613483718475
[2025-11-27 14:09:59] 2025-11-27 19:09:19,081 | INFO     | sum of square deviations: 175374983676.77603
[2025-11-27 14:09:59] 2025-11-27 19:09:19,097 | INFO     | sum of deviations: 2765529620755.003
[2025-11-27 14:09:59] 2025-11-27 19:09:19,097 | INFO     | mean x: 1764244964.629988
[2025-11-27 14:09:59] 2025-11-27 19:09:19,097 | INFO     | mean y: 3435332.120918984
[2025-11-27 14:09:59] 2025-11-27 19:09:19,097 | INFO     | intersect: -27817361030.400444
[2025-11-27 14:09:59] 2025-11-27 19:09:19,098 | INFO     | chi2: 5.642583446338471
[2025-11-27 14:09:59] 2025-11-27 19:09:19,098 | INFO     | current chi2=5.642583446338471 (change=37.902239855927256 %)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,099 | INFO     | sum of square deviations: 172213717964.4815
[2025-11-27 14:09:59] 2025-11-27 19:09:19,115 | INFO     | sum of deviations: 3056432254078.596
[2025-11-27 14:09:59] 2025-11-27 19:09:19,115 | INFO     | mean x: 1764244812.1459854
[2025-11-27 14:09:59] 2025-11-27 19:09:19,115 | INFO     | mean y: 3449356.378345499
[2025-11-27 14:09:59] 2025-11-27 19:09:19,115 | INFO     | intersect: -31308195335.283016
[2025-11-27 14:09:59] 2025-11-27 19:09:19,116 | INFO     | chi2: 3.0034649845692636
[2025-11-27 14:09:59] 2025-11-27 19:09:19,116 | INFO     | current chi2=3.0034649845692636 (change=46.771456494484944 %)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,117 | INFO     | sum of square deviations: 169090635633.08456
[2025-11-27 14:09:59] 2025-11-27 19:09:19,136 | INFO     | time since job start (50826s) is within the limit (172800.0s)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,139 | INFO     | sum of deviations: 3083594847449.673
[2025-11-27 14:09:59] 2025-11-27 19:09:19,139 | INFO     | mean x: 1764244659.6609547
[2025-11-27 14:09:59] 2025-11-27 19:09:19,139 | INFO     | mean y: 3450670.930232558
[2025-11-27 14:09:59] 2025-11-27 19:09:19,139 | INFO     | intersect: -32169920265.92063
[2025-11-27 14:09:59] 2025-11-27 19:09:19,140 | INFO     | chi2: 2.7460903554077003
[2025-11-27 14:09:59] 2025-11-27 19:09:19,140 | INFO     | current chi2=2.7460903554077003 (change=8.569256857791343 %)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,140 | INFO     | right removable region: 816
[2025-11-27 14:09:59] 2025-11-27 19:09:19,153 | INFO     | sum of square deviations: 175373707439.03497
[2025-11-27 14:09:59] 2025-11-27 19:09:19,203 | INFO     | sum of deviations: 2134808418465.8784
[2025-11-27 14:09:59] 2025-11-27 19:09:19,203 | INFO     | mean x: 1764245269.6287787
[2025-11-27 14:09:59] 2025-11-27 19:09:19,203 | INFO     | mean y: 3432884.3579201936
[2025-11-27 14:09:59] 2025-11-27 19:09:19,204 | INFO     | intersect: -21472566618.88235
[2025-11-27 14:09:59] 2025-11-27 19:09:19,204 | INFO     | chi2: 6.771135338484102
[2025-11-27 14:09:59] 2025-11-27 19:09:19,204 | INFO     | current chi2=6.771135338484102 (change=25.482300412395443 %)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,213 | INFO     | sum of square deviations: 172211367538.1904
[2025-11-27 14:09:59] 2025-11-27 19:09:19,265 | INFO     | sum of deviations: 2033134883124.9993
[2025-11-27 14:09:59] 2025-11-27 19:09:19,266 | INFO     | mean x: 1764245422.1386862
[2025-11-27 14:09:59] 2025-11-27 19:09:19,284 | INFO     | mean y: 3437787.8333333335
[2025-11-27 14:09:59] 2025-11-27 19:09:19,284 | INFO     | intersect: -20825320275.12261
[2025-11-27 14:09:59] 2025-11-27 19:09:19,285 | INFO     | chi2: 6.663975981166425
[2025-11-27 14:09:59] 2025-11-27 19:09:19,285 | INFO     | current chi2=6.663975981166425 (change=1.5825906876891265 %)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,286 | INFO     | left removable region: 20
[2025-11-27 14:09:59] 2025-11-27 19:09:19,287 | INFO     | sum of square deviations: 156381547790.54306
[2025-11-27 14:09:59] 2025-11-27 19:09:19,384 | INFO     | sum of deviations: 2490534110248.8364
[2025-11-27 14:09:59] 2025-11-27 19:09:19,384 | INFO     | mean x: 1764245239.2110553
[2025-11-27 14:09:59] 2025-11-27 19:09:19,385 | INFO     | mean y: 3479457.631909548
[2025-11-27 14:09:59] 2025-11-27 19:09:19,385 | INFO     | intersect: -28093908048.625824
[2025-11-27 14:09:59] 2025-11-27 19:09:19,386 | INFO     | chi2: 0.11700413962351783
[2025-11-27 14:09:59] 2025-11-27 19:09:19,386 | INFO     | current memory leak: 15.93 B/s (using 796 data points, chi2=0.12)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,387 | INFO     | could have reported an average CPU frequency of 2960 MHz (31 samples)
[2025-11-27 14:09:59] 2025-11-27 19:09:19,405 | INFO     | ..............................
[2025-11-27 14:09:59] 2025-11-27 19:09:19,405 | INFO     | . Timing measurements:
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . get job = 0 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . initial setup = 2 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . payload setup = 9 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . stage-in = 0 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . payload execution = 50745 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . stage-out = 10 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | . log creation = 3 s
[2025-11-27 14:09:59] 2025-11-27 19:09:19,406 | INFO     | ..............................
[2025-11-27 14:09:59] 2025-11-27 19:09:20,097 | INFO     | 
[2025-11-27 14:09:59] 2025-11-27 19:09:20,097 | INFO     | job summary report
[2025-11-27 14:09:59] 2025-11-27 19:09:20,097 | INFO     | --------------------------------------------------
[2025-11-27 14:09:59] 2025-11-27 19:09:20,097 | INFO     | PanDA job id: 6892522886
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | task id: 47493029
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | errors: (none)
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | pilot state: finished 
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | transexitcode: 0
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | exeerrorcode: 0
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | exeerrordiag: 
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | exitcode: 0
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | exitmsg: OK
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | cpuconsumptiontime: 214696 s
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | nevents: 1000
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | neventsw: 0
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | pid: 763638
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | pgrp: 763638
[2025-11-27 14:09:59] 2025-11-27 19:09:20,098 | INFO     | corecount: 12
[2025-11-27 14:09:59] 2025-11-27 19:09:20,099 | INFO     | event service: False
[2025-11-27 14:09:59] 2025-11-27 19:09:20,099 | INFO     | sizes: {0: 2284294, 1: 2284322, 8: 2284584, 11: 2284612, 50758: 2333402, 50759: 2333401, 50771: 2342579, 50774: 2342635, 50807: 2342881}
[2025-11-27 14:09:59] 2025-11-27 19:09:20,099 | INFO     | --------------------------------------------------
[2025-11-27 14:09:59] 2025-11-27 19:09:20,099 | INFO     | 
[2025-11-27 14:09:59] 2025-11-27 19:09:20,099 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 14:09:59] 2025-11-27 19:09:20,206 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:09:59] 2025-11-27 19:09:20,208 | INFO     | job 6892522886 has completed (purged errors)
[2025-11-27 14:09:59] 2025-11-27 19:09:20,209 | INFO     | overall cleanup function is called
[2025-11-27 14:09:59] 2025-11-27 19:09:21,335 | INFO     | --- collectZombieJob: --- 10, [763638]
[2025-11-27 14:09:59] 2025-11-27 19:09:21,335 | INFO     | zombie collector waiting for pid 763638
[2025-11-27 14:09:59] 2025-11-27 19:09:21,335 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:09:59] 2025-11-27 19:09:21,335 | INFO     | collected zombie processes
[2025-11-27 14:09:59] 2025-11-27 19:09:21,336 | INFO     | will attempt to kill all subprocesses of pid=763638
[2025-11-27 14:09:59] 2025-11-27 19:09:23,728 | INFO     | process IDs to be killed: [763638] (in reverse order)
[2025-11-27 14:09:59] 2025-11-27 19:09:24,129 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:09:59] 2025-11-27 19:09:24,153 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:09:59] 2025-11-27 19:09:24,238 | INFO     | did not find any defunct processes belonging to 763638
[2025-11-27 14:09:59] 2025-11-27 19:09:24,338 | INFO     | did not find any defunct processes belonging to 763638
[2025-11-27 14:09:59] 2025-11-27 19:09:24,348 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:09:59] 2025-11-27 19:09:24,349 | INFO     | ready for new job
[2025-11-27 14:09:59] 2025-11-27 19:09:24,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:09:59] 2025-11-27 19:09:24,365 | INFO     | ***************************************
[2025-11-27 14:09:59] 2025-11-27 19:09:24,365 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:09:59] 2025-11-27 19:09:24,365 | INFO     | ***************************************
[2025-11-27 14:09:59] 2025-11-27 19:09:24,365 | INFO     | 
[2025-11-27 14:09:59] 2025-11-27 19:09:24,402 | INFO     | architecture information:
[2025-11-27 14:09:59] 2025-11-27 19:09:24,420 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:09:59] 2025-11-27 19:09:24,511 | INFO     | cat /etc/os-release:
[2025-11-27 14:09:59] NAME="CentOS Linux"
[2025-11-27 14:09:59] VERSION="7 (Core)"
[2025-11-27 14:09:59] ID="centos"
[2025-11-27 14:09:59] ID_LIKE="rhel fedora"
[2025-11-27 14:09:59] VERSION_ID="7"
[2025-11-27 14:09:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:09:59] ANSI_COLOR="0;31"
[2025-11-27 14:09:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:09:59] HOME_URL="https://www.centos.org/"
[2025-11-27 14:09:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:09:59] 
[2025-11-27 14:09:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:09:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:09:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:09:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:09:59] 
[2025-11-27 14:09:59] 2025-11-27 19:09:24,512 | INFO     | ***************************************
[2025-11-27 14:09:59] 2025-11-27 19:09:25,015 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 14:09:59] 2025-11-27 19:09:25,147 | INFO     | sufficient remaining disk space (122769375232 B)
[2025-11-27 14:09:59] 2025-11-27 19:09:25,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:09:59] 2025-11-27 19:09:25,148 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:09:59] 2025-11-27 19:09:25,148 | INFO     | update_server=False
[2025-11-27 14:09:59] 2025-11-27 19:09:25,148 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:09:59] 2025-11-27 19:09:25,148 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:09:59] 2025-11-27 19:09:25,149 | INFO     | aborting loop
[2025-11-27 14:09:59] 2025-11-27 19:09:25,149 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:09:59] 2025-11-27 19:09:25,192 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:09:59] 2025-11-27 19:09:25,223 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:09:59] 2025-11-27 19:09:25,986 | INFO     | all data control threads have been joined
[2025-11-27 14:09:59] 2025-11-27 19:09:26,074 | INFO     | all job control threads have been joined
[2025-11-27 14:09:59] 2025-11-27 19:09:26,154 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:26,155 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:26,155 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:26,418 | INFO     | all payload control threads have been joined
[2025-11-27 14:09:59] 2025-11-27 19:09:26,578 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:26,966 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:26,992 | INFO     | [data] control thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,098 | INFO     | [job] control thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,186 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,190 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,199 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,206 | INFO     | [job] validate thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,381 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,385 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,424 | INFO     | [payload] control thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:27,486 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:29,232 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:09:59] 2025-11-27 19:09:41,063 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:09:59] 2025-11-27 19:09:41,908 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139805998155584)>', '<ExcThread(monitor, started 139805002295040)>']
[2025-11-27 14:09:59] 2025-11-27 19:09:46,934 | INFO     | all workflow threads have been joined
[2025-11-27 14:09:59] 2025-11-27 19:09:46,938 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:09:59] 2025-11-27 19:09:46,957 | INFO     | traces error code: 0
[2025-11-27 14:09:59] 2025-11-27 19:09:46,958 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:09:59] 2025-11-27 19:09:57,124 | INFO     | PID=750284 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 14:09:59] 2025-11-27 19:09:57,124 | INFO     | .. there are 18 such processes running
[2025-11-27 14:09:59] 2025-11-27 19:09:57,142 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:09:59] 2025-11-27 19:09:57,142 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:09:59] 2025-11-27 19:09:57,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:09:59] 2025-11-27 19:09:57,143 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:09:59] 2025-11-27 19:09:57,143 | INFO     | [monitor] control thread has ended
[2025-11-27 14:09:59] 2025-11-27 19:09:58,584 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:09:59] 2025-11-27 19:09:58,621 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:09:59] 2025-11-27 19:09:58,633 [wrapper] pilotpid: 750284
[2025-11-27 14:09:59] 2025-11-27 19:09:58,653 [wrapper] Pilot exit status: 0
[2025-11-27 14:09:59] 2025-11-27 19:09:58,813 [wrapper] pandaids: 6892522886
[2025-11-27 14:09:59] 2025-11-27 19:09:59,055 [wrapper] cleanup supervisor_pilot 2739980 750285
[2025-11-27 14:09:59] 2025-11-27 19:09:59,067 [wrapper] Test setup, not cleaning
[2025-11-27 14:09:59] 2025-11-27 19:09:59,097 [wrapper] apfmon messages muted
[2025-11-27 14:09:59] 2025-11-27 19:09:59,101 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:09:59] 2025-11-27 19:09:59,111 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:09:59]  *** Error codes and diagnostics ***
[2025-11-27 14:09:59]     "exeErrorCode": 0,
[2025-11-27 14:09:59]     "exeErrorDiag": "",
[2025-11-27 14:09:59]     "pilotErrorCode": 0,
[2025-11-27 14:09:59]     "pilotErrorDiag": "",
[2025-11-27 14:09:59]  *** Listing of results directory ***
[2025-11-27 14:09:59] total 1311260
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:00 pilot3.tar.gz
[2025-11-27 14:09:59] -rwx------. 1 boincer umatlas     36292 Nov 19 02:03 runpilot2-wrapper.sh
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:03 queuedata.json
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:09:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:01 run_atlas
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:01 job.xml
[2025-11-27 14:09:59] -rw-r--r--. 2 boincer umatlas 409758342 Nov 27 00:01 EVNT.47493027._000056.pool.root.1
[2025-11-27 14:09:59] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:01 start_atlas.sh
[2025-11-27 14:09:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:01 shared
[2025-11-27 14:09:59] -rw-r--r--. 2 boincer umatlas    590096 Nov 27 00:01 input.tar.gz
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:01 boinc_lockfile
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas      2768 Nov 27 00:01 pandaJob.out
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas    991570 Nov 27 00:02 agis_schedconf.cvmfs.json
[2025-11-27 14:09:59] drwx------. 5 boincer umatlas      4096 Nov 27 00:02 pilot3
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:54 boinc_task_state.xml
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas 910603609 Nov 27 14:06 HITS.47493029._000511.pool.root.1
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas      1060 Nov 27 14:08 memory_monitor_summary.json
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:08 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas   2475468 Nov 27 14:08 log.47493029._000511.job.log.tgz.1
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas      8595 Nov 27 14:09 heartbeat.json
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 14:09 init_data.xml
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:09 wrapper_checkpoint.txt
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:09 boinc_mmap_file
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas        95 Nov 27 14:09 pilot_heartbeat.json
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas       822 Nov 27 14:09 pilotlog.txt
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas   6747736 Nov 27 14:09 log.47493029._000511.job.log.1
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas       353 Nov 27 14:09 output.list
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:09 runtime_log
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas   9246720 Nov 27 14:09 result.tar.gz
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas      8706 Nov 27 14:09 runtime_log.err
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas       663 Nov 27 14:09 cA5MDm6Orf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0oFKDmPdygCo.diag
[2025-11-27 14:09:59] -rw-r--r--. 1 boincer umatlas     21160 Nov 27 14:09 stderr.txt
[2025-11-27 14:09:59] HITS file was successfully produced:
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas 910603609 Nov 27 14:06 shared/HITS.pool.root.1
[2025-11-27 14:09:59]  *** Contents of shared directory: ***
[2025-11-27 14:09:59] total 1299056
[2025-11-27 14:09:59] -rw-r--r--. 2 boincer umatlas 409758342 Nov 27 00:01 ATLAS.root_0
[2025-11-27 14:09:59] -rw-r--r--. 2 boincer umatlas     15120 Nov 27 00:01 start_atlas.sh
[2025-11-27 14:09:59] -rw-r--r--. 2 boincer umatlas    590096 Nov 27 00:01 input.tar.gz
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas 910603609 Nov 27 14:06 HITS.pool.root.1
[2025-11-27 14:09:59] -rw-------. 1 boincer umatlas   9246720 Nov 27 14:09 result.tar.gz
14:10:00 (745086): run_atlas exited; CPU time 214784.988810
14:10:00 (745086): called boinc_finish(0)

</stderr_txt>
]]>

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