Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:28 (4009561): wrapper (7.7.26015): starting
00:02:28 (4009561): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:28] Arguments: --nthreads 9
[2025-11-27 00:02:28] Threads: 9
[2025-11-27 00:02:28] Checking for CVMFS
[2025-11-27 00:02:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:32] 2.13.3.0 9371 30910 195652 153347 2 506 27462137 32935936 32041 16776704 0 168301963 99.773 96858885 33977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:32] CVMFS is ok
[2025-11-27 00:02:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:32] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:32] Checking for apptainer binary...
[2025-11-27 00:02:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:32] Running /usr/bin/apptainer --version
[2025-11-27 00:02:32] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:33] c-8-1.aglt2.org
[2025-11-27 00:02:33] apptainer works
[2025-11-27 00:02:33] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:33] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:33] Starting ATLAS job with PandaID=6897507583
[2025-11-27 00:02:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 00:01:36]  *** The last 200 lines of the pilot log: ***
[2025-11-28 00:01:36] 2025-11-28 02:04:20,915 | INFO     | time since job start (75639s) is within the limit (172800.0s)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,531 | INFO     | monitor loop #4077: job 0:6897507583 is in state 'finished'
[2025-11-28 00:01:36] 2025-11-28 02:04:21,531 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,580 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-28 00:01:36] 2025-11-28 02:04:21,587 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.80725
[2025-11-28 00:01:36] 2025-11-28 02:04:21,596 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6897507583/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,597 | INFO     | extracted standard info from prmon json
[2025-11-28 00:01:36] 2025-11-28 02:04:21,597 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 00:01:36] 2025-11-28 02:04:21,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 00:01:36] 2025-11-28 02:04:21,621 | INFO     | fitting pss+swap vs Time
[2025-11-28 00:01:36] 2025-11-28 02:04:21,624 | INFO     | sum of square deviations: 586928851657.7386
[2025-11-28 00:01:36] 2025-11-28 02:04:21,678 | INFO     | sum of deviations: 4722530302784.737
[2025-11-28 00:01:36] 2025-11-28 02:04:21,679 | INFO     | mean x: 1764257671.0145514
[2025-11-28 00:01:36] 2025-11-28 02:04:21,679 | INFO     | mean y: 3080746.848019402
[2025-11-28 00:01:36] 2025-11-28 02:04:21,679 | INFO     | intersect: -14192439357.086525
[2025-11-28 00:01:36] 2025-11-28 02:04:21,736 | INFO     | chi2: 12.281933894406935
[2025-11-28 00:01:36] 2025-11-28 02:04:21,738 | INFO     | sum of square deviations: 579841143907.3633
[2025-11-28 00:01:36] 2025-11-28 02:04:21,777 | INFO     | sum of deviations: 5157704311086.434
[2025-11-28 00:01:36] 2025-11-28 02:04:21,781 | INFO     | mean x: 1764257518.5227273
[2025-11-28 00:01:36] 2025-11-28 02:04:21,781 | INFO     | mean y: 3090111.288149351
[2025-11-28 00:01:36] 2025-11-28 02:04:21,782 | INFO     | intersect: -15690033263.559988
[2025-11-28 00:01:36] 2025-11-28 02:04:21,783 | INFO     | chi2: 9.228681837622709
[2025-11-28 00:01:36] 2025-11-28 02:04:21,784 | INFO     | current chi2=9.228681837622709 (change=24.859701110870212 %)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,784 | INFO     | right removable region: 1231
[2025-11-28 00:01:36] 2025-11-28 02:04:21,789 | INFO     | sum of square deviations: 579839623787.3639
[2025-11-28 00:01:36] 2025-11-28 02:04:21,829 | INFO     | sum of deviations: 4190158914359.7124
[2025-11-28 00:01:36] 2025-11-28 02:04:21,829 | INFO     | mean x: 1764257823.5227273
[2025-11-28 00:01:36] 2025-11-28 02:04:21,829 | INFO     | mean y: 3092197.7069805195
[2025-11-28 00:01:36] 2025-11-28 02:04:21,829 | INFO     | intersect: -12746158359.156605
[2025-11-28 00:01:36] 2025-11-28 02:04:21,831 | INFO     | chi2: 8.111441465206688
[2025-11-28 00:01:36] 2025-11-28 02:04:21,831 | INFO     | current chi2=8.111441465206688 (change=33.95631718144522 %)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,833 | INFO     | sum of square deviations: 572807699316.8235
[2025-11-28 00:01:36] 2025-11-28 02:04:21,875 | INFO     | sum of deviations: 3775603780755.964
[2025-11-28 00:01:36] 2025-11-28 02:04:21,875 | INFO     | mean x: 1764257976.0309699
[2025-11-28 00:01:36] 2025-11-28 02:04:21,876 | INFO     | mean y: 3101185.0798696005
[2025-11-28 00:01:36] 2025-11-28 02:04:21,876 | INFO     | intersect: -11625826101.470232
[2025-11-28 00:01:36] 2025-11-28 02:04:21,877 | INFO     | chi2: 5.700402004371966
[2025-11-28 00:01:36] 2025-11-28 02:04:21,878 | INFO     | current chi2=5.700402004371966 (change=29.723933423876176 %)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,879 | INFO     | sum of square deviations: 565833519442.2544
[2025-11-28 00:01:36] 2025-11-28 02:04:21,922 | INFO     | sum of deviations: 3637833578004.8745
[2025-11-28 00:01:36] 2025-11-28 02:04:21,922 | INFO     | mean x: 1764258128.531915
[2025-11-28 00:01:36] 2025-11-28 02:04:21,923 | INFO     | mean y: 3104197.4648117837
[2025-11-28 00:01:36] 2025-11-28 02:04:21,923 | INFO     | intersect: -11339591559.703796
[2025-11-28 00:01:36] 2025-11-28 02:04:21,924 | INFO     | chi2: 5.566872220958571
[2025-11-28 00:01:36] 2025-11-28 02:04:21,925 | INFO     | current chi2=5.566872220958571 (change=2.342462572130598 %)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,925 | INFO     | left removable region: 30
[2025-11-28 00:01:36] 2025-11-28 02:04:21,926 | INFO     | sum of square deviations: 537160485963.00275
[2025-11-28 00:01:36] 2025-11-28 02:04:21,963 | INFO     | sum of deviations: 3874221643615.2114
[2025-11-28 00:01:36] 2025-11-28 02:04:21,964 | INFO     | mean x: 1764258403.0499585
[2025-11-28 00:01:36] 2025-11-28 02:04:21,964 | INFO     | mean y: 3122499.2464612825
[2025-11-28 00:01:36] 2025-11-28 02:04:21,964 | INFO     | intersect: -12721432393.826838
[2025-11-28 00:01:36] 2025-11-28 02:04:21,966 | INFO     | chi2: 1.6104233863353923
[2025-11-28 00:01:36] 2025-11-28 02:04:21,966 | INFO     | current memory leak: 7.21 B/s (using 1201 data points, chi2=1.61)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,967 | INFO     | could have reported an average CPU frequency of 2599 MHz (44 samples)
[2025-11-28 00:01:36] 2025-11-28 02:04:21,967 | INFO     | ..............................
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . Timing measurements:
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . get job = 0 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . initial setup = 5 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . payload setup = 50 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . stage-in = 0 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . payload execution = 75488 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . stage-out = 13 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | . log creation = 1 s
[2025-11-28 00:01:36] 2025-11-28 02:04:21,968 | INFO     | ..............................
[2025-11-28 00:01:36] 2025-11-28 02:04:22,338 | INFO     | 
[2025-11-28 00:01:36] 2025-11-28 02:04:22,339 | INFO     | job summary report
[2025-11-28 00:01:36] 2025-11-28 02:04:22,339 | INFO     | --------------------------------------------------
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | PanDA job id: 6897507583
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | task id: 47556161
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | errors: (none)
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | pilot state: finished 
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | transexitcode: 0
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | exeerrorcode: 0
[2025-11-28 00:01:36] 2025-11-28 02:04:22,340 | INFO     | exeerrordiag: 
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | exitcode: 0
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | exitmsg: OK
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | cpuconsumptiontime: 294096 s
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | nevents: 1000
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | neventsw: 0
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | pid: 4027197
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | pgrp: 4027197
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | corecount: 9
[2025-11-28 00:01:36] 2025-11-28 02:04:22,341 | INFO     | event service: False
[2025-11-28 00:01:36] 2025-11-28 02:04:22,342 | INFO     | sizes: {0: 2284088, 1: 2284287, 2: 2284287, 13: 2284315, 23: 2284371, 33: 2284661, 34: 2284845, 75544: 2343665, 75558: 2352659, 75560: 2352715, 75574: 2352961}
[2025-11-28 00:01:36] 2025-11-28 02:04:22,342 | INFO     | --------------------------------------------------
[2025-11-28 00:01:36] 2025-11-28 02:04:22,342 | INFO     | 
[2025-11-28 00:01:36] 2025-11-28 02:04:22,342 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-28 00:01:36] 2025-11-28 02:04:22,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 00:01:36] 2025-11-28 02:04:22,469 | INFO     | job 6897507583 has completed (purged errors)
[2025-11-28 00:01:36] 2025-11-28 02:04:22,469 | INFO     | overall cleanup function is called
[2025-11-28 00:01:36] 2025-11-28 02:04:23,550 | INFO     | --- collectZombieJob: --- 10, [4027197]
[2025-11-28 00:01:36] 2025-11-28 02:04:23,550 | INFO     | zombie collector waiting for pid 4027197
[2025-11-28 00:01:36] 2025-11-28 02:04:23,551 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 00:01:36] 2025-11-28 02:04:23,551 | INFO     | collected zombie processes
[2025-11-28 00:01:36] 2025-11-28 02:04:23,551 | INFO     | will attempt to kill all subprocesses of pid=4027197
[2025-11-28 00:01:36] 2025-11-28 02:04:25,624 | INFO     | process IDs to be killed: [4027197] (in reverse order)
[2025-11-28 00:01:36] 2025-11-28 02:04:25,885 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 00:01:36] 2025-11-28 02:04:25,886 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 00:01:36] 2025-11-28 02:04:25,930 | INFO     | did not find any defunct processes belonging to 4027197
[2025-11-28 00:01:36] 2025-11-28 02:04:25,947 | INFO     | did not find any defunct processes belonging to 4027197
[2025-11-28 00:01:36] 2025-11-28 02:04:25,952 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 00:01:36] 2025-11-28 02:04:25,953 | INFO     | ready for new job
[2025-11-28 00:01:36] 2025-11-28 02:04:25,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 00:01:36] 2025-11-28 02:04:25,986 | INFO     | ***************************************
[2025-11-28 00:01:36] 2025-11-28 02:04:25,987 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 00:01:36] 2025-11-28 02:04:25,987 | INFO     | ***************************************
[2025-11-28 00:01:36] 2025-11-28 02:04:25,987 | INFO     | 
[2025-11-28 00:01:36] 2025-11-28 02:04:26,031 | INFO     | architecture information:
[2025-11-28 00:01:36] 2025-11-28 02:04:26,032 | INFO     | executing command: cat /etc/os-release
[2025-11-28 00:01:36] 2025-11-28 02:04:26,159 | INFO     | cat /etc/os-release:
[2025-11-28 00:01:36] NAME="CentOS Linux"
[2025-11-28 00:01:36] VERSION="7 (Core)"
[2025-11-28 00:01:36] ID="centos"
[2025-11-28 00:01:36] ID_LIKE="rhel fedora"
[2025-11-28 00:01:36] VERSION_ID="7"
[2025-11-28 00:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 00:01:36] ANSI_COLOR="0;31"
[2025-11-28 00:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 00:01:36] HOME_URL="https://www.centos.org/"
[2025-11-28 00:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 00:01:36] 
[2025-11-28 00:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 00:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 00:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 00:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 00:01:36] 
[2025-11-28 00:01:36] 2025-11-28 02:04:26,160 | INFO     | ***************************************
[2025-11-28 00:01:36] 2025-11-28 02:04:26,663 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-28 00:01:36] 2025-11-28 02:04:26,755 | INFO     | sufficient remaining disk space (71814873088 B)
[2025-11-28 00:01:36] 2025-11-28 02:04:26,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 00:01:36] 2025-11-28 02:04:26,755 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 00:01:36] 2025-11-28 02:04:26,755 | INFO     | update_server=False
[2025-11-28 00:01:36] 2025-11-28 02:04:26,755 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 00:01:36] 2025-11-28 02:04:26,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 00:01:36] 2025-11-28 02:04:27,040 | INFO     | all data control threads have been joined
[2025-11-28 00:01:36] 2025-11-28 02:04:27,075 | INFO     | all payload control threads have been joined
[2025-11-28 00:01:36] 2025-11-28 02:04:27,370 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:01:36] 2025-11-28 02:04:27,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 00:01:36] 2025-11-28 02:04:27,639 | INFO     | aborting loop
[2025-11-28 00:01:36] 2025-11-28 02:04:27,762 | INFO     | [job] retrieve thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:27,882 | INFO     | [payload] failed_post thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,013 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,046 | INFO     | [data] control thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,081 | INFO     | [payload] control thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,229 | INFO     | all job control threads have been joined
[2025-11-28 00:01:36] 2025-11-28 02:04:28,265 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 00:01:36] 2025-11-28 02:04:28,376 | INFO     | [job] queue monitor thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,653 | INFO     | [job] job monitor thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,767 | INFO     | [data] copytool_out thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,802 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,874 | INFO     | [job] validate thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,886 | INFO     | [data] copytool_in thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,888 | INFO     | [payload] validate_post thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:28,900 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:29,235 | INFO     | [job] control thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:32,289 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 00:01:36] 2025-11-28 02:04:54,937 | INFO     | PID=4013988 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 00:01:36] 2025-11-28 02:04:54,938 | INFO     | .. there are 42 such processes running
[2025-11-28 00:01:36] 2025-11-28 02:04:54,938 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 00:01:36] 2025-11-28 02:04:54,938 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 00:01:36] 2025-11-28 02:04:54,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 00:01:36] 2025-11-28 02:05:06,012 | INFO     | [monitor] cgroup control has ended
[2025-11-28 00:01:36] 2025-11-28 02:05:07,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665623369536)>', '<ExcThread(monitor, started 139665147422464)>']
[2025-11-28 00:01:36] 2025-11-28 02:05:08,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 00:01:36] 2025-11-28 02:05:08,080 | INFO     | [monitor] control thread has ended
[2025-11-28 00:01:36] 2025-11-28 02:05:12,979 | INFO     | all workflow threads have been joined
[2025-11-28 00:01:36] 2025-11-28 02:05:13,005 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 00:01:36] 2025-11-28 02:05:13,006 | INFO     | traces error code: 0
[2025-11-28 00:01:36] 2025-11-28 02:05:13,006 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 00:01:36] 2025-11-28 02:05:14,093 [wrapper] ==== pilot stdout END ====
[2025-11-28 00:01:36] 2025-11-28 02:05:14,096 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 00:01:36] 2025-11-28 02:05:14,098 [wrapper] pilotpid: 4013988
[2025-11-28 00:01:36] 2025-11-28 02:05:14,101 [wrapper] Pilot exit status: 0
[2025-11-28 00:01:36] 2025-11-28 02:05:14,135 [wrapper] pandaids: 6897507583
[2025-11-28 00:01:36] 2025-11-28 02:05:14,395 [wrapper] cleanup supervisor_pilot   34078 4013989
[2025-11-28 00:01:36] 2025-11-28 02:05:14,399 [wrapper] Test setup, not cleaning
[2025-11-28 00:01:36] 2025-11-28 02:05:14,401 [wrapper] apfmon messages muted
[2025-11-28 00:01:36] 2025-11-28 02:05:14,404 [wrapper] ==== wrapper stdout END ====
[2025-11-28 00:01:36] 2025-11-28 02:05:14,406 [wrapper] ==== wrapper stderr END ====
[2025-11-28 00:01:36]  *** Error codes and diagnostics ***
[2025-11-28 00:01:36]     "exeErrorCode": 0,
[2025-11-28 00:01:36]     "exeErrorDiag": "",
[2025-11-28 00:01:36]     "pilotErrorCode": 0,
[2025-11-28 00:01:36]     "pilotErrorDiag": "",
[2025-11-28 00:01:36]  *** Listing of results directory ***
[2025-11-28 00:01:36] total 1322748
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-28 00:01:36] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 00:01:36] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-28 00:01:36] -rw-r--r--. 2 boincer umatlas 409473394 Nov 27 00:02 EVNT.47483658._002278.pool.root.1
[2025-11-28 00:01:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-28 00:01:36] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-28 00:01:36] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas      2783 Nov 27 00:02 pandaJob.out
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-28 00:01:36] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas       533 Nov 27 20:49 boinc_task_state.xml
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas 918382446 Nov 27 21:03 HITS.47556161._002611.pool.root.1
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas      1061 Nov 27 21:03 memory_monitor_summary.json
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas   1516240 Nov 27 21:04 agis_ddmendpoints.agis.ALL.json
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas        95 Nov 27 21:04 pilot_heartbeat.json
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas   2392494 Nov 27 21:04 log.47556161._002611.job.log.tgz.1
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas      8622 Nov 27 21:04 heartbeat.json
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas      4824 Nov 27 21:05 pilotlog.txt
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas   8961818 Nov 27 21:05 log.47556161._002611.job.log.1
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas       353 Nov 27 21:05 output.list
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas       620 Nov 27 21:05 runtime_log
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas  11376640 Nov 27 21:05 result.tar.gz
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas      9328 Nov 27 21:05 runtime_log.err
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas       657 Nov 27 21:05 NiLLDmgaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCYMKDmzJ8WVm.diag
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas      6662 Nov 28 00:01 init_data.xml
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas      8192 Nov 28 00:01 boinc_mmap_file
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas        29 Nov 28 00:01 wrapper_checkpoint.txt
[2025-11-28 00:01:36] -rw-r--r--. 1 boincer umatlas     21374 Nov 28 00:01 stderr.txt
[2025-11-28 00:01:36] HITS file was successfully produced:
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas 918382446 Nov 27 21:03 shared/HITS.pool.root.1
[2025-11-28 00:01:36]  *** Contents of shared directory: ***
[2025-11-28 00:01:36] total 1308456
[2025-11-28 00:01:36] -rw-r--r--. 2 boincer umatlas 409473394 Nov 27 00:02 ATLAS.root_0
[2025-11-28 00:01:36] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-28 00:01:36] -rw-r--r--. 2 boincer umatlas    590106 Nov 27 00:02 input.tar.gz
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas 918382446 Nov 27 21:03 HITS.pool.root.1
[2025-11-28 00:01:36] -rw-------. 1 boincer umatlas  11376640 Nov 27 21:05 result.tar.gz
00:01:38 (4009561): run_atlas exited; CPU time 296459.151612
00:01:38 (4009561): called boinc_finish(0)

</stderr_txt>
]]>

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