Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:25 (2775202): wrapper (7.7.26015): starting
00:01:25 (2775202): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 00:01:25] Arguments: --nthreads 12
[2025-11-27 00:01:25] Threads: 12
[2025-11-27 00:01:25] Checking for CVMFS
[2025-11-27 00:01:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:01:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:01:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:01:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:01:27] 2.13.2.0 6751 35339 237068 153347 0 236 21431522 40960000 27206 16776704 0 109020533 99.585 115032234 37320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-27 00:01:27] CVMFS is ok
[2025-11-27 00:01:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:01:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:01:27] Further information can be found at the LHC@home message board.
[2025-11-27 00:01:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:01:27] Checking for apptainer binary...
[2025-11-27 00:01:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:01:27] Running /usr/bin/apptainer --version
[2025-11-27 00:01:27] apptainer version 1.4.4-1.el9
[2025-11-27 00:01:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:01:28] c-212-7.aglt2.org
[2025-11-27 00:01:28] apptainer works
[2025-11-27 00:01:28] Set ATHENA_PROC_NUMBER=12
[2025-11-27 00:01:28] Set ATHENA_CORE_NUMBER=12
[2025-11-27 00:01:28] Starting ATLAS job with PandaID=6898175054
[2025-11-27 00:01:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:43:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:43:17] 2025-11-28 01:42:26,572 | INFO     | monitor loop #4148: job 0:6898175054 is in state 'finished'
[2025-11-27 20:43:17] 2025-11-28 01:42:26,572 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:43:17] 2025-11-28 01:42:27,487 | INFO     | time since job start (74431s) is within the limit (172800.0s)
[2025-11-27 20:43:17] 2025-11-28 01:42:27,951 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:43:17] 2025-11-28 01:42:27,957 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3085.0335937500004
[2025-11-27 20:43:17] 2025-11-28 01:42:27,972 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6898175054/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:43:17] 2025-11-28 01:42:27,972 | INFO     | extracted standard info from prmon json
[2025-11-27 20:43:17] 2025-11-28 01:42:27,972 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:43:17] 2025-11-28 01:42:27,972 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:43:17] 2025-11-28 01:42:27,990 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:43:17] 2025-11-28 01:42:27,992 | INFO     | sum of square deviations: 563061569988.3573
[2025-11-27 20:43:17] 2025-11-28 01:42:28,023 | INFO     | sum of deviations: 5119426953886.415
[2025-11-27 20:43:17] 2025-11-28 01:42:28,024 | INFO     | mean x: 1764256941.722951
[2025-11-27 20:43:17] 2025-11-28 01:42:28,024 | INFO     | mean y: 3499093.231967213
[2025-11-27 20:43:17] 2025-11-28 01:42:28,024 | INFO     | intersect: -16037347987.176039
[2025-11-27 20:43:17] 2025-11-28 01:42:28,025 | INFO     | chi2: 7.681212026779956
[2025-11-27 20:43:17] 2025-11-28 01:42:28,026 | INFO     | sum of square deviations: 556167439955.8495
[2025-11-27 20:43:17] 2025-11-28 01:42:28,094 | INFO     | sum of deviations: 5677262223652.38
[2025-11-27 20:43:17] 2025-11-28 01:42:28,094 | INFO     | mean x: 1764256789.2279835
[2025-11-27 20:43:17] 2025-11-28 01:42:28,094 | INFO     | mean y: 3511433.406584362
[2025-11-27 20:43:17] 2025-11-28 01:42:28,094 | INFO     | intersect: -18005720504.193695
[2025-11-27 20:43:17] 2025-11-28 01:42:28,095 | INFO     | chi2: 3.78240708810516
[2025-11-27 20:43:17] 2025-11-28 01:42:28,095 | INFO     | current chi2=3.78240708810516 (change=50.7576789324642 %)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,109 | INFO     | sum of square deviations: 549329822610.7783
[2025-11-27 20:43:17] 2025-11-28 01:42:28,170 | INFO     | sum of deviations: 5876319781402.655
[2025-11-27 20:43:17] 2025-11-28 01:42:28,170 | INFO     | mean x: 1764256636.7330577
[2025-11-27 20:43:17] 2025-11-28 01:42:28,170 | INFO     | mean y: 3515869.556198347
[2025-11-27 20:43:17] 2025-11-28 01:42:28,170 | INFO     | intersect: -18869182730.04459
[2025-11-27 20:43:17] 2025-11-28 01:42:28,171 | INFO     | chi2: 3.0288372599984026
[2025-11-27 20:43:17] 2025-11-28 01:42:28,171 | INFO     | current chi2=3.0288372599984026 (change=19.92302284110479 %)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,171 | INFO     | right removable region: 1209
[2025-11-27 20:43:17] 2025-11-28 01:42:28,172 | INFO     | sum of square deviations: 556166604013.304
[2025-11-27 20:43:17] 2025-11-28 01:42:28,238 | INFO     | sum of deviations: 4673760163219.986
[2025-11-27 20:43:17] 2025-11-28 01:42:28,239 | INFO     | mean x: 1764257094.2271605
[2025-11-27 20:43:17] 2025-11-28 01:42:28,239 | INFO     | mean y: 3508942.9275720166
[2025-11-27 20:43:17] 2025-11-28 01:42:28,239 | INFO     | intersect: -14822470296.343521
[2025-11-27 20:43:17] 2025-11-28 01:42:28,240 | INFO     | chi2: 5.235908763001447
[2025-11-27 20:43:17] 2025-11-28 01:42:28,240 | INFO     | current chi2=5.235908763001447 (change=31.834862196918234 %)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,245 | INFO     | sum of square deviations: 549328447435.5446
[2025-11-27 20:43:17] 2025-11-28 01:42:28,304 | INFO     | sum of deviations: 4516043401294.914
[2025-11-27 20:43:17] 2025-11-28 01:42:28,304 | INFO     | mean x: 1764257246.728099
[2025-11-27 20:43:17] 2025-11-28 01:42:28,304 | INFO     | mean y: 3512459.996694215
[2025-11-27 20:43:17] 2025-11-28 01:42:28,304 | INFO     | intersect: -14500492083.128712
[2025-11-27 20:43:17] 2025-11-28 01:42:28,309 | INFO     | chi2: 5.105018899400835
[2025-11-27 20:43:17] 2025-11-28 01:42:28,309 | INFO     | current chi2=5.105018899400835 (change=2.499849969226364 %)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,310 | INFO     | left removable region: 20
[2025-11-27 20:43:17] 2025-11-28 01:42:28,311 | INFO     | sum of square deviations: 521221235706.6864
[2025-11-27 20:43:17] 2025-11-28 01:42:28,386 | INFO     | sum of deviations: 5002012195953.338
[2025-11-27 20:43:17] 2025-11-28 01:42:28,387 | INFO     | mean x: 1764257216.2396972
[2025-11-27 20:43:17] 2025-11-28 01:42:28,387 | INFO     | mean y: 3536453.2724978975
[2025-11-27 20:43:17] 2025-11-28 01:42:28,387 | INFO     | intersect: -16927539082.17588
[2025-11-27 20:43:17] 2025-11-28 01:42:28,388 | INFO     | chi2: 0.20079362562310754
[2025-11-27 20:43:17] 2025-11-28 01:42:28,388 | INFO     | current memory leak: 9.60 B/s (using 1189 data points, chi2=0.20)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,389 | INFO     | could have reported an average CPU frequency of 2994 MHz (44 samples)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | ..............................
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . Timing measurements:
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . get job = 0 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . initial setup = 3 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . payload setup = 13 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . stage-in = 0 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . payload execution = 74376 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . stage-out = 3 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | . log creation = 0 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,392 | INFO     | ..............................
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | 
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | job summary report
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | --------------------------------------------------
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | PanDA job id: 6898175054
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | task id: 47556161
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | errors: (none)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | pilot state: finished 
[2025-11-27 20:43:17] 2025-11-28 01:42:28,546 | INFO     | transexitcode: 0
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | exeerrorcode: 0
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | exeerrordiag: 
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | exitcode: 0
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | exitmsg: OK
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | cpuconsumptiontime: 208835 s
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | nevents: 1000
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | neventsw: 0
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | pid: 2797085
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | pgrp: 2797085
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | corecount: 12
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | event service: False
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | sizes: {0: 2284264, 11: 2284554, 74393: 2343759, 74398: 2352753, 74401: 2352809, 74408: 2353055}
[2025-11-27 20:43:17] 2025-11-28 01:42:28,547 | INFO     | --------------------------------------------------
[2025-11-27 20:43:17] 2025-11-28 01:42:28,548 | INFO     | 
[2025-11-27 20:43:17] 2025-11-28 01:42:28,548 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 20:43:17] 2025-11-28 01:42:28,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,578 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:43:17] 2025-11-28 01:42:28,579 | INFO     | job 6898175054 has completed (purged errors)
[2025-11-27 20:43:17] 2025-11-28 01:42:28,579 | INFO     | overall cleanup function is called
[2025-11-27 20:43:17] 2025-11-28 01:42:29,599 | INFO     | --- collectZombieJob: --- 10, [2797085]
[2025-11-27 20:43:17] 2025-11-28 01:42:29,599 | INFO     | zombie collector waiting for pid 2797085
[2025-11-27 20:43:17] 2025-11-28 01:42:29,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:43:17] 2025-11-28 01:42:29,599 | INFO     | collected zombie processes
[2025-11-27 20:43:17] 2025-11-28 01:42:29,599 | INFO     | will attempt to kill all subprocesses of pid=2797085
[2025-11-27 20:43:17] 2025-11-28 01:42:30,122 | INFO     | process IDs to be killed: [2797085] (in reverse order)
[2025-11-27 20:43:17] 2025-11-28 01:42:30,268 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:43:17] 2025-11-28 01:42:30,268 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:43:17] 2025-11-28 01:42:30,285 | INFO     | did not find any defunct processes belonging to 2797085
[2025-11-27 20:43:17] 2025-11-28 01:42:30,301 | INFO     | did not find any defunct processes belonging to 2797085
[2025-11-27 20:43:17] 2025-11-28 01:42:30,303 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:43:17] 2025-11-28 01:42:30,303 | INFO     | ready for new job
[2025-11-27 20:43:17] 2025-11-28 01:42:30,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:43:17] 2025-11-28 01:42:30,311 | INFO     | ***************************************
[2025-11-27 20:43:17] 2025-11-28 01:42:30,311 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:43:17] 2025-11-28 01:42:30,311 | INFO     | ***************************************
[2025-11-27 20:43:17] 2025-11-28 01:42:30,311 | INFO     | 
[2025-11-27 20:43:17] 2025-11-28 01:42:30,316 | INFO     | architecture information:
[2025-11-27 20:43:17] 2025-11-28 01:42:30,317 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:43:17] 2025-11-28 01:42:30,337 | INFO     | cat /etc/os-release:
[2025-11-27 20:43:17] NAME="CentOS Linux"
[2025-11-27 20:43:17] VERSION="7 (Core)"
[2025-11-27 20:43:17] ID="centos"
[2025-11-27 20:43:17] ID_LIKE="rhel fedora"
[2025-11-27 20:43:17] VERSION_ID="7"
[2025-11-27 20:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:43:17] ANSI_COLOR="0;31"
[2025-11-27 20:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:43:17] HOME_URL="https://www.centos.org/"
[2025-11-27 20:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:43:17] 
[2025-11-27 20:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:43:17] 
[2025-11-27 20:43:17] 2025-11-28 01:42:30,337 | INFO     | ***************************************
[2025-11-27 20:43:17] 2025-11-28 01:42:30,843 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 20:43:17] 2025-11-28 01:42:30,879 | INFO     | sufficient remaining disk space (122568048640 B)
[2025-11-27 20:43:17] 2025-11-28 01:42:30,879 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:43:17] 2025-11-28 01:42:30,879 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:43:17] 2025-11-28 01:42:30,879 | INFO     | update_server=False
[2025-11-27 20:43:17] 2025-11-28 01:42:30,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:43:17] 2025-11-28 01:42:30,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:43:17] 2025-11-28 01:42:30,881 | INFO     | aborting loop
[2025-11-27 20:43:17] 2025-11-28 01:42:31,051 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:43:17] 2025-11-28 01:42:31,715 | INFO     | all payload control threads have been joined
[2025-11-27 20:43:17] 2025-11-28 01:42:31,811 | INFO     | all data control threads have been joined
[2025-11-27 20:43:17] 2025-11-28 01:42:31,868 | INFO     | all job control threads have been joined
[2025-11-27 20:43:17] 2025-11-28 01:42:31,887 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:31,888 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:31,949 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:43:17] 2025-11-28 01:42:32,347 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,569 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,663 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,721 | INFO     | [payload] control thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,760 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,816 | INFO     | [data] control thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,827 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:32,874 | INFO     | [job] control thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:33,045 | INFO     | [job] validate thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:33,057 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:33,220 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:33,353 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:33,569 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:43:17] 2025-11-28 01:42:34,575 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:42:35,987 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:43:17] 2025-11-28 01:43:01,072 | INFO     | PID=2782772 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:43:17] 2025-11-28 01:43:01,072 | INFO     | .. there are 25 such processes running
[2025-11-27 20:43:17] 2025-11-28 01:43:01,073 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:43:17] 2025-11-28 01:43:01,073 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:43:17] 2025-11-28 01:43:01,073 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:43:17] 2025-11-28 01:43:11,057 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:43:17] 2025-11-28 01:43:12,073 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140059708315456)>', '<ExcThread(monitor, started 140058547975936)>']
[2025-11-27 20:43:17] 2025-11-28 01:43:12,134 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:43:17] 2025-11-28 01:43:12,134 | INFO     | [monitor] control thread has ended
[2025-11-27 20:43:17] 2025-11-28 01:43:17,099 | INFO     | all workflow threads have been joined
[2025-11-27 20:43:17] 2025-11-28 01:43:17,099 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:43:17] 2025-11-28 01:43:17,099 | INFO     | traces error code: 0
[2025-11-27 20:43:17] 2025-11-28 01:43:17,099 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:43:17] 2025-11-28 01:43:17,420 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:43:17] 2025-11-28 01:43:17,435 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:43:17] 2025-11-28 01:43:17,450 [wrapper] pilotpid: 2782772
[2025-11-27 20:43:17] 2025-11-28 01:43:17,457 [wrapper] Pilot exit status: 0
[2025-11-27 20:43:17] 2025-11-28 01:43:17,489 [wrapper] pandaids: 6898175054
[2025-11-27 20:43:17] 2025-11-28 01:43:17,618 [wrapper] cleanup supervisor_pilot 2235712 2782773
[2025-11-27 20:43:17] 2025-11-28 01:43:17,622 [wrapper] Test setup, not cleaning
[2025-11-27 20:43:17] 2025-11-28 01:43:17,624 [wrapper] apfmon messages muted
[2025-11-27 20:43:17] 2025-11-28 01:43:17,627 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:43:17] 2025-11-28 01:43:17,645 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:43:17]  *** Error codes and diagnostics ***
[2025-11-27 20:43:17]     "exeErrorCode": 0,
[2025-11-27 20:43:17]     "exeErrorDiag": "",
[2025-11-27 20:43:17]     "pilotErrorCode": 0,
[2025-11-27 20:43:17]     "pilotErrorDiag": "",
[2025-11-27 20:43:17]  *** Listing of results directory ***
[2025-11-27 20:43:17] total 1324012
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:46 queuedata.json
[2025-11-27 20:43:17] -rwx------. 1 boincer umatlas     36292 Nov 25 22:47 runpilot2-wrapper.sh
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:43:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:01 run_atlas
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:01 job.xml
[2025-11-27 20:43:17] -rw-r--r--. 2 boincer umatlas 408147102 Nov 27 00:01 EVNT.47483658._002452.pool.root.1
[2025-11-27 20:43:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:01 start_atlas.sh
[2025-11-27 20:43:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:01 shared
[2025-11-27 20:43:17] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:01 input.tar.gz
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:01 boinc_lockfile
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:01 pandaJob.out
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas        57 Nov 27 00:01 setup.sh.local
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas    991570 Nov 27 00:01 agis_schedconf.cvmfs.json
[2025-11-27 20:43:17] drwx------. 5 boincer umatlas      4096 Nov 27 00:01 pilot3
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas       533 Nov 27 20:30 boinc_task_state.xml
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 20:40 init_data.xml
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas 920205402 Nov 27 20:41 HITS.47556161._004346.pool.root.1
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas      1060 Nov 27 20:42 memory_monitor_summary.json
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:42 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas   2713802 Nov 27 20:42 log.47556161._004346.job.log.tgz.1
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas      8602 Nov 27 20:42 heartbeat.json
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas        95 Nov 27 20:43 pilot_heartbeat.json
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:43 boinc_mmap_file
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas      4825 Nov 27 20:43 pilotlog.txt
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:43 wrapper_checkpoint.txt
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas   9040216 Nov 27 20:43 log.47556161._004346.job.log.1
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas       353 Nov 27 20:43 output.list
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:43 runtime_log
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas  11776000 Nov 27 20:43 result.tar.gz
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas       661 Nov 27 20:43 UiLODmrfLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWrMKDm067ASm.diag
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas      9340 Nov 27 20:43 runtime_log.err
[2025-11-27 20:43:17] -rw-r--r--. 1 boincer umatlas     21315 Nov 27 20:43 stderr.txt
[2025-11-27 20:43:17] HITS file was successfully produced:
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas 920205402 Nov 27 20:41 shared/HITS.pool.root.1
[2025-11-27 20:43:17]  *** Contents of shared directory: ***
[2025-11-27 20:43:17] total 1309328
[2025-11-27 20:43:17] -rw-r--r--. 2 boincer umatlas 408147102 Nov 27 00:01 ATLAS.root_0
[2025-11-27 20:43:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:01 start_atlas.sh
[2025-11-27 20:43:17] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:01 input.tar.gz
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas 920205402 Nov 27 20:41 HITS.pool.root.1
[2025-11-27 20:43:17] -rw-------. 1 boincer umatlas  11776000 Nov 27 20:43 result.tar.gz
20:43:19 (2775202): run_atlas exited; CPU time 209490.798110
20:43:19 (2775202): called boinc_finish(0)

</stderr_txt>
]]>

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