Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:57 (3065031): wrapper (7.7.26015): starting
00:02:57 (3065031): wrapper: running run_atlas (--nthreads 9)
[2025-11-27 00:02:57] Arguments: --nthreads 9
[2025-11-27 00:02:57] Threads: 9
[2025-11-27 00:02:57] Checking for CVMFS
[2025-11-27 00:02:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:02:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:02:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:02:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:02:58] 2.13.3.0 12500 31045 235792 153347 2 693 19868846 32503809 59921 16776704 0 210300824 99.526 246485513 37168 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:02:58] CVMFS is ok
[2025-11-27 00:02:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:02:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:02:58] Further information can be found at the LHC@home message board.
[2025-11-27 00:02:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:02:58] Checking for apptainer binary...
[2025-11-27 00:02:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:02:58] Running /usr/bin/apptainer --version
[2025-11-27 00:02:58] apptainer version 1.4.4-1.el9
[2025-11-27 00:02:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:02:58] c7-7-36.aglt2.org
[2025-11-27 00:02:58] apptainer works
[2025-11-27 00:02:58] Set ATHENA_PROC_NUMBER=9
[2025-11-27 00:02:58] Set ATHENA_CORE_NUMBER=9
[2025-11-27 00:02:58] Starting ATLAS job with PandaID=6898120678
[2025-11-27 00:02:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:22:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:22:28] 2025-11-28 00:21:37,744 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 19:22:28] 2025-11-28 00:21:37,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 19:22:28] 2025-11-28 00:21:37,774 | INFO     | fitting pss+swap vs Time
[2025-11-27 19:22:28] 2025-11-28 00:21:37,779 | INFO     | sum of square deviations: 458204305407.45514
[2025-11-27 19:22:28] 2025-11-28 00:21:37,867 | INFO     | sum of deviations: 2089433627948.3423
[2025-11-27 19:22:28] 2025-11-28 00:21:37,867 | INFO     | mean x: 1764254547.3239684
[2025-11-27 19:22:28] 2025-11-28 00:21:37,867 | INFO     | mean y: 3203387.8446005266
[2025-11-27 19:22:28] 2025-11-28 00:21:37,867 | INFO     | intersect: -8041882037.883706
[2025-11-27 19:22:28] 2025-11-28 00:21:37,868 | INFO     | chi2: 9.273067150665703
[2025-11-27 19:22:28] 2025-11-28 00:21:37,869 | INFO     | sum of square deviations: 452197052696.1525
[2025-11-27 19:22:28] 2025-11-28 00:21:37,941 | INFO     | sum of deviations: 2550549246087.0254
[2025-11-27 19:22:28] 2025-11-28 00:21:37,949 | INFO     | mean x: 1764254394.829806
[2025-11-27 19:22:28] 2025-11-28 00:21:37,949 | INFO     | mean y: 3215093.7566137565
[2025-11-27 19:22:28] 2025-11-28 00:21:37,950 | INFO     | intersect: -9947795621.17273
[2025-11-27 19:22:28] 2025-11-28 00:21:37,950 | INFO     | chi2: 5.628162989773376
[2025-11-27 19:22:28] 2025-11-28 00:21:37,951 | INFO     | current chi2=5.628162989773376 (change=39.306349255010666 %)
[2025-11-27 19:22:28] 2025-11-28 00:21:37,951 | INFO     | sum of square deviations: 446242475987.442
[2025-11-27 19:22:28] 2025-11-28 00:21:38,025 | INFO     | sum of deviations: 2881234120538.63
[2025-11-27 19:22:28] 2025-11-28 00:21:38,026 | INFO     | mean x: 1764254242.3348095
[2025-11-27 19:22:28] 2025-11-28 00:21:38,026 | INFO     | mean y: 3223556.2205491588
[2025-11-27 19:22:28] 2025-11-28 00:21:38,026 | INFO     | intersect: -11387959026.90749
[2025-11-27 19:22:28] 2025-11-28 00:21:38,027 | INFO     | chi2: 3.50179136732684
[2025-11-27 19:22:28] 2025-11-28 00:21:38,027 | INFO     | current chi2=3.50179136732684 (change=37.780917615752216 %)
[2025-11-27 19:22:28] 2025-11-28 00:21:38,028 | INFO     | sum of square deviations: 440340137149.8781
[2025-11-27 19:22:28] 2025-11-28 00:21:38,161 | INFO     | sum of deviations: 2974034738579.9844
[2025-11-27 19:22:28] 2025-11-28 00:21:38,161 | INFO     | mean x: 1764254089.836299
[2025-11-27 19:22:28] 2025-11-28 00:21:38,162 | INFO     | mean y: 3225951.0053380784
[2025-11-27 19:22:28] 2025-11-28 00:21:38,162 | INFO     | intersect: -11912455832.66333
[2025-11-27 19:22:28] 2025-11-28 00:21:38,162 | INFO     | chi2: 3.2277656371696613
[2025-11-27 19:22:28] 2025-11-28 00:21:38,163 | INFO     | current chi2=3.2277656371696613 (change=7.82530143611501 %)
[2025-11-27 19:22:28] 2025-11-28 00:21:38,163 | INFO     | right removable region: 1123
[2025-11-27 19:22:28] 2025-11-28 00:21:38,164 | INFO     | sum of square deviations: 452196202052.81274
[2025-11-27 19:22:28] 2025-11-28 00:21:38,382 | INFO     | sum of deviations: 1710231111871.9065
[2025-11-27 19:22:28] 2025-11-28 00:21:38,382 | INFO     | mean x: 1764254699.8289242
[2025-11-27 19:22:28] 2025-11-28 00:21:38,382 | INFO     | mean y: 3213005.1490299823
[2025-11-27 19:22:28] 2025-11-28 00:21:38,382 | INFO     | intersect: -6669296103.101429
[2025-11-27 19:22:28] 2025-11-28 00:21:38,383 | INFO     | chi2: 6.766510191497225
[2025-11-27 19:22:28] 2025-11-28 00:21:38,383 | INFO     | current chi2=6.766510191497225 (change=27.030505855751674 %)
[2025-11-27 19:22:28] 2025-11-28 00:21:38,406 | INFO     | sum of square deviations: 446241120819.7676
[2025-11-27 19:22:28] 2025-11-28 00:21:38,569 | INFO     | sum of deviations: 1566450603838.4653
[2025-11-27 19:22:28] 2025-11-28 00:21:38,569 | INFO     | mean x: 1764254852.330381
[2025-11-27 19:22:28] 2025-11-28 00:21:38,569 | INFO     | mean y: 3216686.9397697076
[2025-11-27 19:22:28] 2025-11-28 00:21:38,569 | INFO     | intersect: -6189888228.360194
[2025-11-27 19:22:28] 2025-11-28 00:21:38,570 | INFO     | chi2: 6.525096390516603
[2025-11-27 19:22:28] 2025-11-28 00:21:38,570 | INFO     | current chi2=6.525096390516603 (change=3.5677741427772123 %)
[2025-11-27 19:22:28] 2025-11-28 00:21:38,570 | INFO     | left removable region: 20
[2025-11-27 19:22:28] 2025-11-28 00:21:38,571 | INFO     | sum of square deviations: 416117774439.50653
[2025-11-27 19:22:28] 2025-11-28 00:21:38,625 | INFO     | sum of deviations: 2221615672203.801
[2025-11-27 19:22:28] 2025-11-28 00:21:38,626 | INFO     | mean x: 1764254669.3399818
[2025-11-27 19:22:28] 2025-11-28 00:21:38,626 | INFO     | mean y: 3245385.1631912966
[2025-11-27 19:22:28] 2025-11-28 00:21:38,626 | INFO     | intersect: -9415952889.757502
[2025-11-27 19:22:28] 2025-11-28 00:21:38,627 | INFO     | chi2: 0.2076920502972213
[2025-11-27 19:22:28] 2025-11-28 00:21:38,627 | INFO     | current memory leak: 5.34 B/s (using 1103 data points, chi2=0.21)
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | could have reported an average CPU frequency of 3204 MHz (42 samples)
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | ..............................
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | . Timing measurements:
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | . get job = 0 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | . initial setup = 3 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | . payload setup = 11 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,632 | INFO     | . stage-in = 0 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,633 | INFO     | . payload execution = 69433 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,633 | INFO     | . stage-out = 6 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,633 | INFO     | . log creation = 1 s
[2025-11-27 19:22:28] 2025-11-28 00:21:38,633 | INFO     | ..............................
[2025-11-27 19:22:28] 2025-11-28 00:21:39,084 | INFO     | 
[2025-11-27 19:22:28] 2025-11-28 00:21:39,087 | INFO     | job summary report
[2025-11-27 19:22:28] 2025-11-28 00:21:39,087 | INFO     | --------------------------------------------------
[2025-11-27 19:22:28] 2025-11-28 00:21:39,087 | INFO     | PanDA job id: 6898120678
[2025-11-27 19:22:28] 2025-11-28 00:21:39,087 | INFO     | task id: 47556161
[2025-11-27 19:22:28] 2025-11-28 00:21:39,087 | INFO     | errors: (none)
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | pilot state: finished 
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | transexitcode: 0
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | exeerrorcode: 0
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | exeerrordiag: 
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | exitcode: 0
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | exitmsg: OK
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | cpuconsumptiontime: 200058 s
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | nevents: 1000
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | neventsw: 0
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | pid: 3079696
[2025-11-27 19:22:28] 2025-11-28 00:21:39,088 | INFO     | pgrp: 3079696
[2025-11-27 19:22:28] 2025-11-28 00:21:39,148 | INFO     | corecount: 9
[2025-11-27 19:22:28] 2025-11-28 00:21:39,149 | INFO     | event service: False
[2025-11-27 19:22:28] 2025-11-28 00:21:39,149 | INFO     | sizes: {0: 2284037, 1: 2284292, 10: 2284554, 12: 2284582, 69450: 2342789, 69458: 2351783, 69461: 2351967, 69481: 2352213}
[2025-11-27 19:22:28] 2025-11-28 00:21:39,149 | INFO     | --------------------------------------------------
[2025-11-27 19:22:28] 2025-11-28 00:21:39,149 | INFO     | 
[2025-11-27 19:22:28] 2025-11-28 00:21:39,149 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:22:28] 2025-11-28 00:21:39,256 | INFO     | job 6898120678 has completed (purged errors)
[2025-11-27 19:22:28] 2025-11-28 00:21:39,257 | INFO     | overall cleanup function is called
[2025-11-27 19:22:28] 2025-11-28 00:21:40,307 | INFO     | --- collectZombieJob: --- 10, [3079696]
[2025-11-27 19:22:28] 2025-11-28 00:21:40,308 | INFO     | zombie collector waiting for pid 3079696
[2025-11-27 19:22:28] 2025-11-28 00:21:40,308 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:22:28] 2025-11-28 00:21:40,308 | INFO     | collected zombie processes
[2025-11-27 19:22:28] 2025-11-28 00:21:40,308 | INFO     | will attempt to kill all subprocesses of pid=3079696
[2025-11-27 19:22:28] 2025-11-28 00:21:42,146 | INFO     | process IDs to be killed: [3079696] (in reverse order)
[2025-11-27 19:22:28] 2025-11-28 00:21:42,738 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:22:28] 2025-11-28 00:21:42,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:22:28] 2025-11-28 00:21:42,842 | INFO     | did not find any defunct processes belonging to 3079696
[2025-11-27 19:22:28] 2025-11-28 00:21:42,930 | INFO     | did not find any defunct processes belonging to 3079696
[2025-11-27 19:22:28] 2025-11-28 00:21:42,931 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:22:28] 2025-11-28 00:21:42,932 | INFO     | ready for new job
[2025-11-27 19:22:28] 2025-11-28 00:21:42,932 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:22:28] 2025-11-28 00:21:42,936 | INFO     | ***************************************
[2025-11-27 19:22:28] 2025-11-28 00:21:42,937 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:22:28] 2025-11-28 00:21:42,937 | INFO     | ***************************************
[2025-11-27 19:22:28] 2025-11-28 00:21:42,937 | INFO     | 
[2025-11-27 19:22:28] 2025-11-28 00:21:42,942 | INFO     | architecture information:
[2025-11-27 19:22:28] 2025-11-28 00:21:42,942 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:22:28] 2025-11-28 00:21:43,000 | INFO     | cat /etc/os-release:
[2025-11-27 19:22:28] NAME="CentOS Linux"
[2025-11-27 19:22:28] VERSION="7 (Core)"
[2025-11-27 19:22:28] ID="centos"
[2025-11-27 19:22:28] ID_LIKE="rhel fedora"
[2025-11-27 19:22:28] VERSION_ID="7"
[2025-11-27 19:22:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:22:28] ANSI_COLOR="0;31"
[2025-11-27 19:22:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:22:28] HOME_URL="https://www.centos.org/"
[2025-11-27 19:22:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:22:28] 
[2025-11-27 19:22:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:22:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:22:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:22:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:22:28] 
[2025-11-27 19:22:28] 2025-11-28 00:21:43,001 | INFO     | ***************************************
[2025-11-27 19:22:28] 2025-11-28 00:21:43,507 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 19:22:28] 2025-11-28 00:21:43,606 | INFO     | sufficient remaining disk space (84634763264 B)
[2025-11-27 19:22:28] 2025-11-28 00:21:43,606 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:22:28] 2025-11-28 00:21:43,606 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:22:28] 2025-11-28 00:21:43,606 | INFO     | update_server=False
[2025-11-27 19:22:28] 2025-11-28 00:21:43,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:22:28] 2025-11-28 00:21:43,606 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:22:28] 2025-11-28 00:21:43,607 | INFO     | aborting loop
[2025-11-27 19:22:28] 2025-11-28 00:21:43,610 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:22:28] 2025-11-28 00:21:43,987 | INFO     | all data control threads have been joined
[2025-11-27 19:22:28] 2025-11-28 00:21:44,111 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:22:28] 2025-11-28 00:21:44,117 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:22:28] 2025-11-28 00:21:44,612 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:44,613 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:44,750 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:44,863 | INFO     | all payload control threads have been joined
[2025-11-27 19:22:28] 2025-11-28 00:21:44,878 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:44,994 | INFO     | [data] control thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:45,119 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:45,257 | INFO     | all job control threads have been joined
[2025-11-27 19:22:28] 2025-11-28 00:21:45,680 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:45,886 | INFO     | [payload] control thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,063 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,064 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,064 | INFO     | [job] validate thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,064 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,124 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,188 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:46,263 | INFO     | [job] control thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:21:47,618 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:22:28] 2025-11-28 00:22:13,001 | INFO     | PID=3068734 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:22:28] 2025-11-28 00:22:13,001 | INFO     | .. there are 74 such processes running
[2025-11-27 19:22:28] 2025-11-28 00:22:13,005 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:22:28] 2025-11-28 00:22:13,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:22:28] 2025-11-28 00:22:13,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:22:28] 2025-11-28 00:22:19,984 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:22:28] 2025-11-28 00:22:21,298 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140306325645120)>', '<ExcThread(monitor, started 140305844139776)>']
[2025-11-27 19:22:28] 2025-11-28 00:22:22,115 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:22:28] 2025-11-28 00:22:22,115 | INFO     | [monitor] control thread has ended
[2025-11-27 19:22:28] 2025-11-28 00:22:26,324 | INFO     | all workflow threads have been joined
[2025-11-27 19:22:28] 2025-11-28 00:22:26,324 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:22:28] 2025-11-28 00:22:26,325 | INFO     | traces error code: 0
[2025-11-27 19:22:28] 2025-11-28 00:22:26,325 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:22:28] 2025-11-28 00:22:27,219 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:22:28] 2025-11-28 00:22:27,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:22:28] 2025-11-28 00:22:27,284 [wrapper] pilotpid: 3068734
[2025-11-27 19:22:28] 2025-11-28 00:22:27,302 [wrapper] Pilot exit status: 0
[2025-11-27 19:22:28] 2025-11-28 00:22:27,418 [wrapper] pandaids: 6898120678
[2025-11-27 19:22:28] 2025-11-28 00:22:27,822 [wrapper] cleanup supervisor_pilot 1540641 3068735
[2025-11-27 19:22:28] 2025-11-28 00:22:27,835 [wrapper] Test setup, not cleaning
[2025-11-27 19:22:28] 2025-11-28 00:22:27,863 [wrapper] apfmon messages muted
[2025-11-27 19:22:28] 2025-11-28 00:22:27,878 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:22:28] 2025-11-28 00:22:27,910 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:22:28]  *** Error codes and diagnostics ***
[2025-11-27 19:22:28]     "exeErrorCode": 0,
[2025-11-27 19:22:28]     "exeErrorDiag": "",
[2025-11-27 19:22:28]     "pilotErrorCode": 0,
[2025-11-27 19:22:28]     "pilotErrorDiag": "",
[2025-11-27 19:22:28]  *** Listing of results directory ***
[2025-11-27 19:22:28] total 1324456
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:40 queuedata.json
[2025-11-27 19:22:28] -rwx------. 1 boincer umatlas     36292 Nov 25 22:45 runpilot2-wrapper.sh
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:22:28] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:02 run_atlas
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:02 job.xml
[2025-11-27 19:22:28] -rw-r--r--. 2 boincer umatlas 410024559 Nov 27 00:02 EVNT.47483658._002442.pool.root.1
[2025-11-27 19:22:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 19:22:28] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:02 shared
[2025-11-27 19:22:28] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:02 input.tar.gz
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:02 boinc_lockfile
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:02 pandaJob.out
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas        57 Nov 27 00:02 setup.sh.local
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas    991570 Nov 27 00:03 agis_schedconf.cvmfs.json
[2025-11-27 19:22:28] drwx------. 5 boincer umatlas      4096 Nov 27 00:03 pilot3
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:06 boinc_task_state.xml
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 19:19 init_data.xml
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas 919865339 Nov 27 19:20 HITS.47556161._004250.pool.root.1
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas      1070 Nov 27 19:21 memory_monitor_summary.json
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas   1516240 Nov 27 19:21 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas   2364608 Nov 27 19:21 log.47556161._004250.job.log.tgz.1
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas      8642 Nov 27 19:21 heartbeat.json
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas        95 Nov 27 19:22 pilot_heartbeat.json
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas      4824 Nov 27 19:22 pilotlog.txt
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:22 boinc_mmap_file
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:22 wrapper_checkpoint.txt
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas   8849175 Nov 27 19:22 log.47556161._004250.job.log.1
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas       353 Nov 27 19:22 output.list
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:22 runtime_log
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas  11233280 Nov 27 19:22 result.tar.gz
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas       664 Nov 27 19:22 xvqNDmudLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQsJKDmBbiGfn.diag
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:22 runtime_log.err
[2025-11-27 19:22:28] -rw-r--r--. 1 boincer umatlas     21130 Nov 27 19:22 stderr.txt
[2025-11-27 19:22:28] HITS file was successfully produced:
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas 919865339 Nov 27 19:20 shared/HITS.pool.root.1
[2025-11-27 19:22:28]  *** Contents of shared directory: ***
[2025-11-27 19:22:28] total 1310300
[2025-11-27 19:22:28] -rw-r--r--. 2 boincer umatlas 410024559 Nov 27 00:02 ATLAS.root_0
[2025-11-27 19:22:28] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:02 start_atlas.sh
[2025-11-27 19:22:28] -rw-r--r--. 2 boincer umatlas    590105 Nov 27 00:02 input.tar.gz
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas 919865339 Nov 27 19:20 HITS.pool.root.1
[2025-11-27 19:22:28] -rw-------. 1 boincer umatlas  11233280 Nov 27 19:22 result.tar.gz
19:22:30 (3065031): run_atlas exited; CPU time 201354.909611
19:22:30 (3065031): called boinc_finish(0)

</stderr_txt>
]]>

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