Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:57 (1043008): wrapper (7.7.26015): starting
00:03:57 (1043008): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 00:03:57] Arguments: --nthreads 8
[2025-11-27 00:03:57] Threads: 8
[2025-11-27 00:03:57] Checking for CVMFS
[2025-11-27 00:03:57] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 00:03:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 00:03:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 00:03:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 00:03:58] 2.13.3.0 10223 31023 243436 153347 2 755 38921305 40960001 62202 16776704 0 406128270 99.764 252059037 50664 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-27 00:03:58] CVMFS is ok
[2025-11-27 00:03:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 00:03:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 00:03:58] Further information can be found at the LHC@home message board.
[2025-11-27 00:03:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 00:03:58] Checking for apptainer binary...
[2025-11-27 00:03:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 00:03:58] Running /usr/bin/apptainer --version
[2025-11-27 00:03:58] apptainer version 1.4.4-1.el9
[2025-11-27 00:03:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 00:03:59] c8-7-6.aglt2.org
[2025-11-27 00:03:59] apptainer works
[2025-11-27 00:03:59] Set ATHENA_PROC_NUMBER=8
[2025-11-27 00:03:59] Set ATHENA_CORE_NUMBER=8
[2025-11-27 00:03:59] Starting ATLAS job with PandaID=6898120670
[2025-11-27 00:03:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 07:03:59]  *** The last 200 lines of the pilot log: ***
[2025-11-27 07:03:59] 2025-11-27 12:03:26,056 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3797.8540546874997
[2025-11-27 07:03:59] 2025-11-27 12:03:26,070 | INFO     | using path: /tmp/boinchome/slots/14/PanDA_Pilot-6898120670/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,071 | INFO     | extracted standard info from prmon json
[2025-11-27 07:03:59] 2025-11-27 12:03:26,071 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 07:03:59] 2025-11-27 12:03:26,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 07:03:59] 2025-11-27 12:03:26,075 | INFO     | fitting pss+swap vs Time
[2025-11-27 07:03:59] 2025-11-27 12:03:26,076 | INFO     | sum of square deviations: 21214060686.195667
[2025-11-27 07:03:59] 2025-11-27 12:03:26,078 | INFO     | sum of deviations: 315101053149.6843
[2025-11-27 07:03:59] 2025-11-27 12:03:26,079 | INFO     | mean x: 1764232502.779951
[2025-11-27 07:03:59] 2025-11-27 12:03:26,079 | INFO     | mean y: 2820825.229828851
[2025-11-27 07:03:59] 2025-11-27 12:03:26,079 | INFO     | intersect: -26202040556.570904
[2025-11-27 07:03:59] 2025-11-27 12:03:26,079 | INFO     | chi2: 6.757571973085403
[2025-11-27 07:03:59] 2025-11-27 12:03:26,079 | INFO     | sum of square deviations: 20445566823.116405
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | sum of deviations: 440980919254.45074
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | mean x: 1764232350.289604
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | mean y: 2845785.4405940594
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | intersect: -38049061033.279945
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | chi2: 3.891278618037762
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | current chi2=3.891278618037762 (change=42.416024075862495 %)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,082 | INFO     | sum of square deviations: 19695864009.959976
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | sum of deviations: 446855679429.72974
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | mean x: 1764232197.7994988
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | mean y: 2846953.6466165413
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | intersect: -40023687400.00434
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | chi2: 3.7739088226642212
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | current chi2=3.7739088226642212 (change=3.016226975613646 %)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | right removable region: 398
[2025-11-27 07:03:59] 2025-11-27 12:03:26,085 | INFO     | sum of square deviations: 20445372233.116413
[2025-11-27 07:03:59] 2025-11-27 12:03:26,087 | INFO     | sum of deviations: 168361363179.03232
[2025-11-27 07:03:59] 2025-11-27 12:03:26,088 | INFO     | mean x: 1764232655.289604
[2025-11-27 07:03:59] 2025-11-27 12:03:26,088 | INFO     | mean y: 2849905.8886138615
[2025-11-27 07:03:59] 2025-11-27 12:03:26,088 | INFO     | intersect: -14525064353.770063
[2025-11-27 07:03:59] 2025-11-27 12:03:26,088 | INFO     | chi2: 3.2141228733137455
[2025-11-27 07:03:59] 2025-11-27 12:03:26,088 | INFO     | current chi2=3.2141228733137455 (change=52.43672008059684 %)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,088 | INFO     | sum of square deviations: 19695622935.46369
[2025-11-27 07:03:59] 2025-11-27 12:03:26,090 | INFO     | sum of deviations: 139156182732.56622
[2025-11-27 07:03:59] 2025-11-27 12:03:26,090 | INFO     | mean x: 1764232807.7844613
[2025-11-27 07:03:59] 2025-11-27 12:03:26,090 | INFO     | mean y: 2855839.7042606515
[2025-11-27 07:03:59] 2025-11-27 12:03:26,090 | INFO     | intersect: -12462040740.986855
[2025-11-27 07:03:59] 2025-11-27 12:03:26,091 | INFO     | chi2: 3.133344932818792
[2025-11-27 07:03:59] 2025-11-27 12:03:26,091 | INFO     | current chi2=3.133344932818792 (change=2.5132188058408507 %)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,091 | INFO     | left removable region: 20
[2025-11-27 07:03:59] 2025-11-27 12:03:26,091 | INFO     | sum of square deviations: 16746667931.619078
[2025-11-27 07:03:59] 2025-11-27 12:03:26,093 | INFO     | sum of deviations: 231637793542.8256
[2025-11-27 07:03:59] 2025-11-27 12:03:26,093 | INFO     | mean x: 1764232777.3015873
[2025-11-27 07:03:59] 2025-11-27 12:03:26,093 | INFO     | mean y: 2891930.791005291
[2025-11-27 07:03:59] 2025-11-27 12:03:26,093 | INFO     | intersect: -24399752792.251587
[2025-11-27 07:03:59] 2025-11-27 12:03:26,093 | INFO     | chi2: 0.04020360040185098
[2025-11-27 07:03:59] 2025-11-27 12:03:26,093 | INFO     | current memory leak: 13.83 B/s (using 378 data points, chi2=0.04)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | could have reported an average CPU frequency of 3765 MHz (17 samples)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | ..............................
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . Timing measurements:
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . get job = 0 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . initial setup = 3 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . payload setup = 54 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . stage-in = 0 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . payload execution = 24971 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . stage-out = 2 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | . log creation = 0 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,094 | INFO     | ..............................
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | 
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | job summary report
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | --------------------------------------------------
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | PanDA job id: 6898120670
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | task id: 47556161
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | errors: (none)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,146 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | pilot state: finished 
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | transexitcode: 0
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | exeerrorcode: 0
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | exeerrordiag: 
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | exitcode: 0
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | exitmsg: OK
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | cpuconsumptiontime: 136006 s
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | nevents: 1000
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | neventsw: 0
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | pid: 1096343
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | pgrp: 1096343
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | corecount: 8
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | event service: False
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | sizes: {0: 2284265, 1: 2284293, 11: 2284293, 22: 2284321, 32: 2284611, 33: 2284639, 25029: 2321089, 25032: 2330085, 25035: 2330141, 25041: 2330451}
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | --------------------------------------------------
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | 
[2025-11-27 07:03:59] 2025-11-27 12:03:26,147 | INFO     | executing command: ls -lF /tmp/boinchome/slots/14
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | job 6898120670 has completed (purged errors)
[2025-11-27 07:03:59] 2025-11-27 12:03:26,165 | INFO     | overall cleanup function is called
[2025-11-27 07:03:59] 2025-11-27 12:03:27,179 | INFO     | --- collectZombieJob: --- 10, [1096343]
[2025-11-27 07:03:59] 2025-11-27 12:03:27,179 | INFO     | zombie collector waiting for pid 1096343
[2025-11-27 07:03:59] 2025-11-27 12:03:27,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 07:03:59] 2025-11-27 12:03:27,179 | INFO     | collected zombie processes
[2025-11-27 07:03:59] 2025-11-27 12:03:27,179 | INFO     | will attempt to kill all subprocesses of pid=1096343
[2025-11-27 07:03:59] 2025-11-27 12:03:27,719 | INFO     | process IDs to be killed: [1096343] (in reverse order)
[2025-11-27 07:03:59] 2025-11-27 12:03:27,935 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 07:03:59] 2025-11-27 12:03:27,935 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 07:03:59] 2025-11-27 12:03:27,969 | INFO     | did not find any defunct processes belonging to 1096343
[2025-11-27 07:03:59] 2025-11-27 12:03:27,998 | INFO     | did not find any defunct processes belonging to 1096343
[2025-11-27 07:03:59] 2025-11-27 12:03:27,999 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 07:03:59] 2025-11-27 12:03:27,999 | INFO     | ready for new job
[2025-11-27 07:03:59] 2025-11-27 12:03:28,000 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 07:03:59] 2025-11-27 12:03:28,002 | INFO     | ***************************************
[2025-11-27 07:03:59] 2025-11-27 12:03:28,002 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 07:03:59] 2025-11-27 12:03:28,002 | INFO     | ***************************************
[2025-11-27 07:03:59] 2025-11-27 12:03:28,002 | INFO     | 
[2025-11-27 07:03:59] 2025-11-27 12:03:28,007 | INFO     | architecture information:
[2025-11-27 07:03:59] 2025-11-27 12:03:28,007 | INFO     | executing command: cat /etc/os-release
[2025-11-27 07:03:59] 2025-11-27 12:03:28,029 | INFO     | cat /etc/os-release:
[2025-11-27 07:03:59] NAME="CentOS Linux"
[2025-11-27 07:03:59] VERSION="7 (Core)"
[2025-11-27 07:03:59] ID="centos"
[2025-11-27 07:03:59] ID_LIKE="rhel fedora"
[2025-11-27 07:03:59] VERSION_ID="7"
[2025-11-27 07:03:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 07:03:59] ANSI_COLOR="0;31"
[2025-11-27 07:03:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 07:03:59] HOME_URL="https://www.centos.org/"
[2025-11-27 07:03:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 07:03:59] 
[2025-11-27 07:03:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 07:03:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 07:03:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 07:03:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 07:03:59] 
[2025-11-27 07:03:59] 2025-11-27 12:03:28,029 | INFO     | ***************************************
[2025-11-27 07:03:59] 2025-11-27 12:03:28,533 | INFO     | executing command: df -mP /tmp/boinchome/slots/14
[2025-11-27 07:03:59] 2025-11-27 12:03:28,552 | INFO     | sufficient remaining disk space (160718389248 B)
[2025-11-27 07:03:59] 2025-11-27 12:03:28,552 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 07:03:59] 2025-11-27 12:03:28,553 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 07:03:59] 2025-11-27 12:03:28,553 | INFO     | update_server=False
[2025-11-27 07:03:59] 2025-11-27 12:03:28,553 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 07:03:59] 2025-11-27 12:03:28,553 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 07:03:59] 2025-11-27 12:03:28,671 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 07:03:59] 2025-11-27 12:03:28,671 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 07:03:59] 2025-11-27 12:03:28,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:03:59] 2025-11-27 12:03:28,671 | INFO     | will abort loop
[2025-11-27 07:03:59] 2025-11-27 12:03:28,965 | INFO     | all data control threads have been joined
[2025-11-27 07:03:59] 2025-11-27 12:03:28,978 | INFO     | all payload control threads have been joined
[2025-11-27 07:03:59] 2025-11-27 12:03:29,558 | INFO     | [job] retrieve thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:29,611 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:29,626 | INFO     | [payload] validate_post thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:29,676 | INFO     | [job] job monitor thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:29,687 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:29,847 | INFO     | all job control threads have been joined
[2025-11-27 07:03:59] 2025-11-27 12:03:29,971 | INFO     | [data] control thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:29,984 | INFO     | [payload] control thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:30,018 | INFO     | [data] copytool_in thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:30,088 | INFO     | [job] validate thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:30,181 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:30,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 07:03:59] 2025-11-27 12:03:30,558 | INFO     | [data] copytool_out thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:30,852 | INFO     | [job] control thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:31,028 | INFO     | [payload] failed_post thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:31,161 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 07:03:59] 2025-11-27 12:03:32,167 | INFO     | [job] queue monitor thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:34,246 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:39,416 | INFO     | job.realtimelogging is not enabled
[2025-11-27 07:03:59] 2025-11-27 12:03:40,423 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 07:03:59] 2025-11-27 12:03:42,084 | INFO     | [monitor] cgroup control has ended
[2025-11-27 07:03:59] 2025-11-27 12:03:43,103 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140410859226944)>', '<ExcThread(monitor, started 140410366179072)>']
[2025-11-27 07:03:59] 2025-11-27 12:03:48,129 | INFO     | all workflow threads have been joined
[2025-11-27 07:03:59] 2025-11-27 12:03:48,129 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 07:03:59] 2025-11-27 12:03:48,130 | INFO     | traces error code: 0
[2025-11-27 07:03:59] 2025-11-27 12:03:48,130 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 07:03:59] 2025-11-27 12:03:58,808 | INFO     | PID=1058990 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 07:03:59] 2025-11-27 12:03:58,809 | INFO     | .. there are 64 such processes running
[2025-11-27 07:03:59] 2025-11-27 12:03:58,809 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 07:03:59] 2025-11-27 12:03:58,810 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 07:03:59] 2025-11-27 12:03:58,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 07:03:59] 2025-11-27 12:03:58,810 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 07:03:59] 2025-11-27 12:03:58,810 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 07:03:59] 2025-11-27 12:03:58,810 | INFO     | [monitor] control thread has ended
[2025-11-27 07:03:59] 2025-11-27 12:03:58,949 [wrapper] ==== pilot stdout END ====
[2025-11-27 07:03:59] 2025-11-27 12:03:58,954 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 07:03:59] 2025-11-27 12:03:58,959 [wrapper] pilotpid: 1058990
[2025-11-27 07:03:59] 2025-11-27 12:03:58,962 [wrapper] Pilot exit status: 0
[2025-11-27 07:03:59] 2025-11-27 12:03:58,999 [wrapper] pandaids: 6898120670
[2025-11-27 07:03:59] 2025-11-27 12:03:59,157 [wrapper] cleanup supervisor_pilot 3881275 1058991
[2025-11-27 07:03:59] 2025-11-27 12:03:59,161 [wrapper] Test setup, not cleaning
[2025-11-27 07:03:59] 2025-11-27 12:03:59,167 [wrapper] apfmon messages muted
[2025-11-27 07:03:59] 2025-11-27 12:03:59,170 [wrapper] ==== wrapper stdout END ====
[2025-11-27 07:03:59] 2025-11-27 12:03:59,173 [wrapper] ==== wrapper stderr END ====
[2025-11-27 07:03:59]  *** Error codes and diagnostics ***
[2025-11-27 07:03:59]     "exeErrorCode": 0,
[2025-11-27 07:03:59]     "exeErrorDiag": "",
[2025-11-27 07:03:59]     "pilotErrorCode": 0,
[2025-11-27 07:03:59]     "pilotErrorDiag": "",
[2025-11-27 07:03:59]  *** Listing of results directory ***
[2025-11-27 07:03:59] total 1312452
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 22:33 pilot3.tar.gz
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 22:40 queuedata.json
[2025-11-27 07:03:59] -rwx------. 1 boincer umatlas     36292 Nov 25 22:45 runpilot2-wrapper.sh
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas       100 Nov 27 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 07:03:59] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 27 00:03 run_atlas
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas       105 Nov 27 00:03 job.xml
[2025-11-27 07:03:59] -rw-r--r--. 2 boincer umatlas 410024559 Nov 27 00:03 EVNT.47483658._002442.pool.root.1
[2025-11-27 07:03:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 07:03:59] drwxrwx--x. 2 boincer umatlas      4096 Nov 27 00:03 shared
[2025-11-27 07:03:59] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 00:03 input.tar.gz
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas         0 Nov 27 00:03 boinc_lockfile
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas      2785 Nov 27 00:03 pandaJob.out
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas        57 Nov 27 00:04 setup.sh.local
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas    991570 Nov 27 00:04 agis_schedconf.cvmfs.json
[2025-11-27 07:03:59] drwx------. 5 boincer umatlas      4096 Nov 27 00:04 pilot3
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas       531 Nov 27 06:55 boinc_task_state.xml
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 06:57 init_data.xml
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas 920195752 Nov 27 07:02 HITS.47556161._004242.pool.root.1
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas      1063 Nov 27 07:03 memory_monitor_summary.json
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas   1516240 Nov 27 07:03 agis_ddmendpoints.agis.ALL.json
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas   1695114 Nov 27 07:03 log.47556161._004242.job.log.tgz.1
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas      8609 Nov 27 07:03 heartbeat.json
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas        95 Nov 27 07:03 pilot_heartbeat.json
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas       893 Nov 27 07:03 pilotlog.txt
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas        28 Nov 27 07:03 wrapper_checkpoint.txt
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas   3209818 Nov 27 07:03 log.47556161._004242.job.log.1
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas       353 Nov 27 07:03 output.list
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 07:03 boinc_mmap_file
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas       620 Nov 27 07:03 runtime_log
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas   4925440 Nov 27 07:03 result.tar.gz
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas       661 Nov 27 07:03 zXaNDmudLi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIsJKDm4z7imm.diag
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas      9351 Nov 27 07:03 runtime_log.err
[2025-11-27 07:03:59] -rw-r--r--. 1 boincer umatlas     21324 Nov 27 07:03 stderr.txt
[2025-11-27 07:03:59] HITS file was successfully produced:
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas 920195752 Nov 27 07:02 shared/HITS.pool.root.1
[2025-11-27 07:03:59]  *** Contents of shared directory: ***
[2025-11-27 07:03:59] total 1304464
[2025-11-27 07:03:59] -rw-r--r--. 2 boincer umatlas 410024559 Nov 27 00:03 ATLAS.root_0
[2025-11-27 07:03:59] -rw-r--r--. 2 boincer umatlas     15847 Nov 27 00:03 start_atlas.sh
[2025-11-27 07:03:59] -rw-r--r--. 2 boincer umatlas    590102 Nov 27 00:03 input.tar.gz
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas 920195752 Nov 27 07:02 HITS.pool.root.1
[2025-11-27 07:03:59] -rw-------. 1 boincer umatlas   4925440 Nov 27 07:03 result.tar.gz
07:04:01 (1043008): run_atlas exited; CPU time 136464.460461
07:04:01 (1043008): called boinc_finish(0)

</stderr_txt>
]]>

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